BLASTX nr result

ID: Dioscorea21_contig00009807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009807
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284127.1| PREDICTED: uncharacterized protein ycf36 [Vi...   382   e-104
ref|NP_001050454.1| Os03g0439700 [Oryza sativa Japonica Group] g...   373   e-101
gb|AAR89010.1| expressed protein [Oryza sativa Japonica Group]        373   e-101
ref|XP_002304310.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_003597114.1| hypothetical protein MTR_2g089840 [Medicago ...   371   e-100

>ref|XP_002284127.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
           gi|147834799|emb|CAN75014.1| hypothetical protein
           VITISV_039949 [Vitis vinifera]
           gi|296087349|emb|CBI33723.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  382 bits (982), Expect = e-104
 Identities = 196/306 (64%), Positives = 227/306 (74%), Gaps = 15/306 (4%)
 Frame = +1

Query: 61  RINVHRSNSPEF---------FHVWSLKLQQRWKL-VTFKALKDGAEGGTGDLAGQRWNP 210
           R+NV+ S  P           F  W+++  +  KL ++ +ALKD  +GGT  + G  W+P
Sbjct: 3   RLNVYCSPIPSVRQVTIGSSTFSSWTIQYHKGRKLGISIRALKDETDGGTSGIPGGSWDP 62

Query: 211 GLEIEVPYEQRPVNEYSSLKDGILYSWGELSPGSFFFRLGSLWFVTFIVLGAPIAAASFD 390
           GLEIEVP+EQRPVNEYSSLKDG LYSWGELSPGSFF RLG LW V F VLG PIAAASF+
Sbjct: 63  GLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFIRLGGLWLVAFTVLGVPIAAASFN 122

Query: 391 PSKDPLRFALAAGTGTLLMVSLVVLRIYLGWSYVGNRLLSAVVPYEETGWYDGQMWVKPP 570
           PS++PLRF LAAGTGTL +VSL+VLRIYLGWSYVG+RLLSAV+PYEE+GWYDGQMWVKPP
Sbjct: 123 PSREPLRFVLAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPP 182

Query: 571 EVLARDRLLGSYKVKPVIKLLKQXXXXXXXXXXXXISLFVFATPVEDLLHYVF---QSQG 741
           EVLARDRLLGSYKVKPVIKLLKQ            ++LF+FATPVED L   F   ++  
Sbjct: 183 EVLARDRLLGSYKVKPVIKLLKQTLVGTGVLLVTAVTLFIFATPVEDFLRTSFATKETLS 242

Query: 742 NNSTSNV--KPSLRKEELLRLPVEVKXXXXXXXXXXXXXGGRPVYCRDRYYRALAGGQYC 915
           N  TSN+  K ++RKE+LLRLPVEV               GRPVYCRDR+YRALAGGQYC
Sbjct: 243 NVPTSNISTKFNIRKEDLLRLPVEVMADDDLAAAAAEAADGRPVYCRDRFYRALAGGQYC 302

Query: 916 KWDDLL 933
           KWDDLL
Sbjct: 303 KWDDLL 308


>ref|NP_001050454.1| Os03g0439700 [Oryza sativa Japonica Group]
           gi|108709042|gb|ABF96837.1| expressed protein [Oryza
           sativa Japonica Group] gi|113548925|dbj|BAF12368.1|
           Os03g0439700 [Oryza sativa Japonica Group]
           gi|222625197|gb|EEE59329.1| hypothetical protein
           OsJ_11404 [Oryza sativa Japonica Group]
          Length = 312

 Score =  373 bits (957), Expect = e-101
 Identities = 188/264 (71%), Positives = 203/264 (76%), Gaps = 2/264 (0%)
 Frame = +1

Query: 151 ALKDGAEGGTGDLAG--QRWNPGLEIEVPYEQRPVNEYSSLKDGILYSWGELSPGSFFFR 324
           ALK+  EG     AG    W+PGLEI+VP+EQRPVNEYS+LKD +LYSW ELSPGSFF R
Sbjct: 52  ALKEEPEGSRSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLR 111

Query: 325 LGSLWFVTFIVLGAPIAAASFDPSKDPLRFALAAGTGTLLMVSLVVLRIYLGWSYVGNRL 504
           LGSLW +TF VL APIAAASF P KDPL+F LAAG GTLL+VSLVVLRIYLGWSYVG+RL
Sbjct: 112 LGSLWLITFTVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRL 171

Query: 505 LSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKLLKQXXXXXXXXXXXXISL 684
           LSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVI LLKQ            +SL
Sbjct: 172 LSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVINLLKQTLVGTGALLVGAVSL 231

Query: 685 FVFATPVEDLLHYVFQSQGNNSTSNVKPSLRKEELLRLPVEVKXXXXXXXXXXXXXGGRP 864
           F FA PVED LH V       S ++ KPSLR+EELLRLPVEV+              GRP
Sbjct: 232 FAFAAPVEDFLHSV---NAPPSAASSKPSLRREELLRLPVEVRQDDDLAAAAAEAADGRP 288

Query: 865 VYCRDRYYRALAGGQYCKWDDLLN 936
           VYCRDRYYRALAGGQYCKWDDLLN
Sbjct: 289 VYCRDRYYRALAGGQYCKWDDLLN 312


>gb|AAR89010.1| expressed protein [Oryza sativa Japonica Group]
          Length = 262

 Score =  373 bits (957), Expect = e-101
 Identities = 188/264 (71%), Positives = 203/264 (76%), Gaps = 2/264 (0%)
 Frame = +1

Query: 151 ALKDGAEGGTGDLAG--QRWNPGLEIEVPYEQRPVNEYSSLKDGILYSWGELSPGSFFFR 324
           ALK+  EG     AG    W+PGLEI+VP+EQRPVNEYS+LKD +LYSW ELSPGSFF R
Sbjct: 2   ALKEEPEGSRSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLR 61

Query: 325 LGSLWFVTFIVLGAPIAAASFDPSKDPLRFALAAGTGTLLMVSLVVLRIYLGWSYVGNRL 504
           LGSLW +TF VL APIAAASF P KDPL+F LAAG GTLL+VSLVVLRIYLGWSYVG+RL
Sbjct: 62  LGSLWLITFTVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRL 121

Query: 505 LSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKLLKQXXXXXXXXXXXXISL 684
           LSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVI LLKQ            +SL
Sbjct: 122 LSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVINLLKQTLVGTGALLVGAVSL 181

Query: 685 FVFATPVEDLLHYVFQSQGNNSTSNVKPSLRKEELLRLPVEVKXXXXXXXXXXXXXGGRP 864
           F FA PVED LH V       S ++ KPSLR+EELLRLPVEV+              GRP
Sbjct: 182 FAFAAPVEDFLHSV---NAPPSAASSKPSLRREELLRLPVEVRQDDDLAAAAAEAADGRP 238

Query: 865 VYCRDRYYRALAGGQYCKWDDLLN 936
           VYCRDRYYRALAGGQYCKWDDLLN
Sbjct: 239 VYCRDRYYRALAGGQYCKWDDLLN 262


>ref|XP_002304310.1| predicted protein [Populus trichocarpa] gi|222841742|gb|EEE79289.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  372 bits (954), Expect = e-100
 Identities = 185/285 (64%), Positives = 210/285 (73%), Gaps = 8/285 (2%)
 Frame = +1

Query: 106 WSLKLQQRWKL---VTFKALKDGAEGGTGDLAGQRWNPGLEIEVPYEQRPVNEYSSLKDG 276
           W ++  +  KL   V+ KALKD    GT    G+ W PGLEIEVP+EQRPVNEYSSLK+G
Sbjct: 26  WIIRYHRAQKLLPVVSVKALKDDTNEGTSSFRGRSWEPGLEIEVPFEQRPVNEYSSLKEG 85

Query: 277 ILYSWGELSPGSFFFRLGSLWFVTFIVLGAPIAAASFDPSKDPLRFALAAGTGTLLMVSL 456
            LYSWGEL PG F  RLG LW VTF VLG PIAAA+F+PS++PLRF LAAGTGTL +VSL
Sbjct: 86  PLYSWGELGPGPFLLRLGGLWLVTFTVLGVPIAAATFNPSREPLRFVLAAGTGTLFLVSL 145

Query: 457 VVLRIYLGWSYVGNRLLSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKLLK 636
           ++LRIYLGWSYVG+RLLSAV+PYEE+GWYDGQMWVKP EVLARDRLLGSYKVKPVIK+LK
Sbjct: 146 IILRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPTEVLARDRLLGSYKVKPVIKMLK 205

Query: 637 QXXXXXXXXXXXXISLFVFATPVEDLLHYVFQSQGNNST-----SNVKPSLRKEELLRLP 801
           Q            + LF+FATPVED     F ++ N S       N K ++RKEELLRLP
Sbjct: 206 QTLVGTGALLVTAVMLFIFATPVEDFFQTTFATKENPSIDPASGKNTKYNVRKEELLRLP 265

Query: 802 VEVKXXXXXXXXXXXXXGGRPVYCRDRYYRALAGGQYCKWDDLLN 936
           VEV              GGRPVYCRDRYYRALAGGQYCKW+DLLN
Sbjct: 266 VEVIADDDLAAAAAEAAGGRPVYCRDRYYRALAGGQYCKWEDLLN 310


>ref|XP_003597114.1| hypothetical protein MTR_2g089840 [Medicago truncatula]
           gi|357482685|ref|XP_003611629.1| hypothetical protein
           MTR_5g016100 [Medicago truncatula]
           gi|355486162|gb|AES67365.1| hypothetical protein
           MTR_2g089840 [Medicago truncatula]
           gi|355512964|gb|AES94587.1| hypothetical protein
           MTR_5g016100 [Medicago truncatula]
           gi|388506430|gb|AFK41281.1| unknown [Medicago
           truncatula]
          Length = 312

 Score =  371 bits (952), Expect = e-100
 Identities = 181/270 (67%), Positives = 206/270 (76%), Gaps = 5/270 (1%)
 Frame = +1

Query: 139 VTFKALKDGAEGGTGDLAGQRWNPGLEIEVPYEQRPVNEYSSLKDGILYSWGELSPGSFF 318
           +  KA+K    G T   +G  W+PGLEIEVP+EQRPVNEYSSLKDG+LYSWGEL PGSFF
Sbjct: 42  IKVKAVKGEMNGETSGSSGGSWDPGLEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFF 101

Query: 319 FRLGSLWFVTFIVLGAPIAAASFDPSKDPLRFALAAGTGTLLMVSLVVLRIYLGWSYVGN 498
            RLG LW   F VLGAPIAAASF PS++PLRF LAAGTGTL +VSL+VLRIYLGWSYVG+
Sbjct: 102 LRLGGLWLAVFTVLGAPIAAASFSPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGD 161

Query: 499 RLLSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKLLKQXXXXXXXXXXXXI 678
           RLLSAV+PYEE+GWYDGQMWVKPPE+LARDRLLGSYKVKPV+KLLKQ            +
Sbjct: 162 RLLSAVIPYEESGWYDGQMWVKPPEILARDRLLGSYKVKPVVKLLKQTLVGTGALLVTGV 221

Query: 679 SLFVFATPVEDLLHYVFQSQGNNST-----SNVKPSLRKEELLRLPVEVKXXXXXXXXXX 843
            LF+FATPVE+ LH  F ++ N ST      N K +LRKEELL+LP +VK          
Sbjct: 222 MLFIFATPVENFLHSTFTTEENKSTVQVPKVNTKYNLRKEELLKLPADVKADDNLAAAAA 281

Query: 844 XXXGGRPVYCRDRYYRALAGGQYCKWDDLL 933
               GRPVYCRDR+YRALAGGQYCKW+DLL
Sbjct: 282 EAADGRPVYCRDRFYRALAGGQYCKWEDLL 311


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