BLASTX nr result

ID: Dioscorea21_contig00009703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009703
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001150164.1| fiber protein Fb15 [Zea mays] gi|195637274|g...   128   1e-27
ref|XP_002451641.1| hypothetical protein SORBIDRAFT_04g005070 [S...   124   2e-26
ref|XP_003570425.1| PREDICTED: uncharacterized protein LOC100841...   120   4e-25
dbj|BAD27614.1| putative fiber protein Fb15 [Oryza sativa Japoni...   110   3e-22
gb|AAS21008.1| fiber protein [Hyacinthus orientalis]                  109   5e-22

>ref|NP_001150164.1| fiber protein Fb15 [Zea mays] gi|195637274|gb|ACG38105.1| fiber
           protein Fb15 [Zea mays] gi|413935799|gb|AFW70350.1|
           fiber protein Fb15 [Zea mays]
          Length = 91

 Score =  128 bits (321), Expect = 1e-27
 Identities = 57/72 (79%), Positives = 68/72 (94%)
 Frame = +3

Query: 96  MAMRAFYNEIKSMKLREVPAYLKPKFTWENIKKSADQAVDRYIDKYIETSSVEPLFHVCI 275
           MA+RA YNEI+SMK+R+VPAYLKP+ TW+N+KKSADQAVDRYI+KYI+TSS +PL+HVCI
Sbjct: 1   MALRALYNEIRSMKVRDVPAYLKPRLTWDNVKKSADQAVDRYIEKYIDTSSPDPLYHVCI 60

Query: 276 GGMIFSYFVALP 311
           GGMIFSYFV LP
Sbjct: 61  GGMIFSYFVNLP 72


>ref|XP_002451641.1| hypothetical protein SORBIDRAFT_04g005070 [Sorghum bicolor]
           gi|241931472|gb|EES04617.1| hypothetical protein
           SORBIDRAFT_04g005070 [Sorghum bicolor]
          Length = 91

 Score =  124 bits (312), Expect = 2e-26
 Identities = 55/72 (76%), Positives = 65/72 (90%)
 Frame = +3

Query: 96  MAMRAFYNEIKSMKLREVPAYLKPKFTWENIKKSADQAVDRYIDKYIETSSVEPLFHVCI 275
           MA+RA YNEI+ MK+REVPAYLKP+ TW+N+KKSADQAVDRYI+KYI+TSS +PLFHVC 
Sbjct: 1   MALRALYNEIRGMKVREVPAYLKPRLTWDNVKKSADQAVDRYIEKYIDTSSPDPLFHVCF 60

Query: 276 GGMIFSYFVALP 311
           GGM+FSY V LP
Sbjct: 61  GGMVFSYLVNLP 72


>ref|XP_003570425.1| PREDICTED: uncharacterized protein LOC100841437 isoform 1
           [Brachypodium distachyon]
           gi|357137677|ref|XP_003570426.1| PREDICTED:
           uncharacterized protein LOC100841437 isoform 2
           [Brachypodium distachyon]
          Length = 88

 Score =  120 bits (300), Expect = 4e-25
 Identities = 53/72 (73%), Positives = 62/72 (86%)
 Frame = +3

Query: 96  MAMRAFYNEIKSMKLREVPAYLKPKFTWENIKKSADQAVDRYIDKYIETSSVEPLFHVCI 275
           MA+RA YNEI++MK+REVPAYLKP+ TW N+KKS DQAVDRYI+KYIET S +P+FHVC 
Sbjct: 1   MALRALYNEIRAMKVREVPAYLKPRLTWGNVKKSTDQAVDRYIEKYIETGSADPIFHVCF 60

Query: 276 GGMIFSYFVALP 311
           GGM FSY V LP
Sbjct: 61  GGMAFSYLVNLP 72


>dbj|BAD27614.1| putative fiber protein Fb15 [Oryza sativa Japonica Group]
           gi|125538299|gb|EAY84694.1| hypothetical protein
           OsI_06064 [Oryza sativa Indica Group]
           gi|125581003|gb|EAZ21934.1| hypothetical protein
           OsJ_05587 [Oryza sativa Japonica Group]
           gi|215764954|dbj|BAG86651.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767695|dbj|BAG99923.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 95

 Score =  110 bits (275), Expect = 3e-22
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = +3

Query: 96  MAMRAFYNEIKSMKLREVPAYLKPKFTWENIKKSADQAVDRYIDKYIETSSVEPLFHVCI 275
           MA+RA  +EI+ MK+REVP YLKP+ +WEN+KKS+DQAVDRYIDKYIETSS EPLFHV  
Sbjct: 1   MALRALISEIRGMKVREVPGYLKPRLSWENVKKSSDQAVDRYIDKYIETSSPEPLFHVIY 60

Query: 276 GGMIFSYFVALP 311
           G M FSY + LP
Sbjct: 61  GLMAFSYLINLP 72


>gb|AAS21008.1| fiber protein [Hyacinthus orientalis]
          Length = 135

 Score =  109 bits (273), Expect = 5e-22
 Identities = 49/63 (77%), Positives = 58/63 (92%)
 Frame = +3

Query: 123 IKSMKLREVPAYLKPKFTWENIKKSADQAVDRYIDKYIETSSVEPLFHVCIGGMIFSYFV 302
           IK +K+RE+PA++KPK +W NIKK+ DQAVDRYI+KYI+TSSVEPLFHVCIGGMIFSY V
Sbjct: 9   IKGLKVRELPAHVKPKLSWTNIKKTTDQAVDRYIEKYIDTSSVEPLFHVCIGGMIFSYLV 68

Query: 303 ALP 311
           ALP
Sbjct: 69  ALP 71


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