BLASTX nr result

ID: Dioscorea21_contig00009651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009651
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607683.1| Trafficking protein particle complex subunit...   201   7e-50
ref|XP_002281399.1| PREDICTED: trafficking protein particle comp...   200   1e-49
gb|AFK41630.1| unknown [Lotus japonicus]                              197   6e-49
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   196   2e-48
ref|XP_002522846.1| Trafficking protein particle complex subunit...   194   8e-48

>ref|XP_003607683.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|217075312|gb|ACJ86016.1| unknown [Medicago
           truncatula] gi|355508738|gb|AES89880.1| Trafficking
           protein particle complex subunit [Medicago truncatula]
           gi|388499948|gb|AFK38040.1| unknown [Medicago
           truncatula]
          Length = 186

 Score =  201 bits (510), Expect = 7e-50
 Identities = 97/109 (88%), Positives = 105/109 (96%)
 Frame = +1

Query: 4   MAPLPPRSGDAVFANIERVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 183
           MAP+ PR+GDA+FANIERVNAELF+LTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVAPRTGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 60

Query: 184 IDEFLAKSNVSRCADFKETADVIAKVGFKMFLGVTASVTNWDTDGMSCS 330
           IDEFLAKSNVSRC DF+ETADVIAKVGFKMFLGVTASVTNWD +G +CS
Sbjct: 61  IDEFLAKSNVSRCVDFRETADVIAKVGFKMFLGVTASVTNWDAEGTTCS 109


>ref|XP_002281399.1| PREDICTED: trafficking protein particle complex subunit 3 [Vitis
           vinifera] gi|147765421|emb|CAN64900.1| hypothetical
           protein VITISV_041653 [Vitis vinifera]
           gi|297735985|emb|CBI23959.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/109 (88%), Positives = 103/109 (94%)
 Frame = +1

Query: 4   MAPLPPRSGDAVFANIERVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 183
           MAP  PRSGDA+FAN+ERVNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPAAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 184 IDEFLAKSNVSRCADFKETADVIAKVGFKMFLGVTASVTNWDTDGMSCS 330
           IDEFLAKSNVSRC DFKETA+ IAKVGFKMFLGVTASVTNWD DG SCS
Sbjct: 61  IDEFLAKSNVSRCVDFKETAEAIAKVGFKMFLGVTASVTNWDADGTSCS 109


>gb|AFK41630.1| unknown [Lotus japonicus]
          Length = 186

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/109 (87%), Positives = 103/109 (94%)
 Frame = +1

Query: 4   MAPLPPRSGDAVFANIERVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 183
           MAP+ PRSGDA+FANIERVNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 184 IDEFLAKSNVSRCADFKETADVIAKVGFKMFLGVTASVTNWDTDGMSCS 330
           +DEFLAKSNVSRC DF+ET DVIAKVGFKMFLGVTASVTNWD +G  CS
Sbjct: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCS 109


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/109 (88%), Positives = 102/109 (93%)
 Frame = +1

Query: 4   MAPLPPRSGDAVFANIERVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 183
           MAP+ PRSGDA+FA++E VNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGVRL
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGVRL 60

Query: 184 IDEFLAKSNVSRCADFKETADVIAKVGFKMFLGVTASVTNWDTDGMSCS 330
           IDEFLAKSNVSRC DFKETADVIAKVGFKMFLGV ASVTNWD DG  CS
Sbjct: 61  IDEFLAKSNVSRCVDFKETADVIAKVGFKMFLGVGASVTNWDADGTCCS 109


>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/109 (84%), Positives = 104/109 (95%)
 Frame = +1

Query: 4   MAPLPPRSGDAVFANIERVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 183
           MAP+ PRSGDA+FA++ERVNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 184 IDEFLAKSNVSRCADFKETADVIAKVGFKMFLGVTASVTNWDTDGMSCS 330
           +DEFLAKSNV+RC DF+ETA+VIAKVGFKMFLGV+ASVTNWD DG  CS
Sbjct: 61  VDEFLAKSNVNRCVDFRETAEVIAKVGFKMFLGVSASVTNWDADGTCCS 109


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