BLASTX nr result

ID: Dioscorea21_contig00009635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009635
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327679.1| predicted protein [Populus trichocarpa] gi|2...   322   5e-86
ref|XP_002310827.1| predicted protein [Populus trichocarpa] gi|2...   318   7e-85
ref|XP_002521507.1| Ubiquitin-conjugating enzyme E2-18 kDa, puta...   317   1e-84
gb|AFK42852.1| unknown [Lotus japonicus]                              315   6e-84
ref|NP_001237276.1| uncharacterized protein LOC100305572 [Glycin...   313   2e-83

>ref|XP_002327679.1| predicted protein [Populus trichocarpa] gi|222836764|gb|EEE75157.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  322 bits (824), Expect = 5e-86
 Identities = 151/161 (93%), Positives = 152/161 (94%)
 Frame = +2

Query: 59  MTXXXXXXRKALSKIACNRLQKELVEWQVNPPTWFKHKVTDNLQRWVIEVVGAPGTLYAG 238
           MT      RKALSKIACNRLQKELVEWQVNPPT FKHKVTDNLQRWVIEV+GAPGTLYA 
Sbjct: 1   MTSSSTTTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 239 ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 418
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 419 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 541
           LSMLSSSTVKQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002310827.1| predicted protein [Populus trichocarpa] gi|222853730|gb|EEE91277.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  318 bits (814), Expect = 7e-85
 Identities = 149/161 (92%), Positives = 150/161 (93%)
 Frame = +2

Query: 59  MTXXXXXXRKALSKIACNRLQKELVEWQVNPPTWFKHKVTDNLQRWVIEVVGAPGTLYAG 238
           MT      RKALSKIACNRLQKELVEWQVNPPT FKHKVTDNLQRWVIEV+GAPGTLYA 
Sbjct: 1   MTSSSATTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 239 ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 418
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 419 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 541
           LSMLSSS  KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002521507.1| Ubiquitin-conjugating enzyme E2-18 kDa, putative [Ricinus communis]
           gi|223539185|gb|EEF40778.1| Ubiquitin-conjugating enzyme
           E2-18 kDa, putative [Ricinus communis]
          Length = 161

 Score =  317 bits (813), Expect = 1e-84
 Identities = 149/161 (92%), Positives = 151/161 (93%)
 Frame = +2

Query: 59  MTXXXXXXRKALSKIACNRLQKELVEWQVNPPTWFKHKVTDNLQRWVIEVVGAPGTLYAG 238
           MT      RKALSKIACNRLQKELVEWQVNPP+ FKHKVTDNLQRWVIEV+GAPGTLYA 
Sbjct: 1   MTSSSAASRKALSKIACNRLQKELVEWQVNPPSGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 239 ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 418
           ETYQLQVDFPEHYPMEAPQVIFLHPAP HPHIYSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPPHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 419 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 541
           LSMLSSSTVKQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>gb|AFK42852.1| unknown [Lotus japonicus]
          Length = 161

 Score =  315 bits (806), Expect = 6e-84
 Identities = 147/161 (91%), Positives = 150/161 (93%)
 Frame = +2

Query: 59  MTXXXXXXRKALSKIACNRLQKELVEWQVNPPTWFKHKVTDNLQRWVIEVVGAPGTLYAG 238
           MT      RK LSKIACNRLQKELVEWQVNPPT FKHKVTDNLQRWVIEV GAPGTLY+ 
Sbjct: 1   MTSSSAAARKTLSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVAGAPGTLYSN 60

Query: 239 ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 418
           ETYQLQVDFPE+YPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 419 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 541
           LSMLSSSTVKQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|NP_001237276.1| uncharacterized protein LOC100305572 [Glycine max]
           gi|356496691|ref|XP_003517199.1| PREDICTED: probable
           ubiquitin-conjugating enzyme E2 16-like [Glycine max]
           gi|255625949|gb|ACU13319.1| unknown [Glycine max]
          Length = 161

 Score =  313 bits (802), Expect = 2e-83
 Identities = 146/161 (90%), Positives = 149/161 (92%)
 Frame = +2

Query: 59  MTXXXXXXRKALSKIACNRLQKELVEWQVNPPTWFKHKVTDNLQRWVIEVVGAPGTLYAG 238
           MT      RK LSKIACNRLQKELVEWQVNPPT FKHKVTDNLQRWV+EV GAPGTLYA 
Sbjct: 1   MTSSSAAARKNLSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVVEVTGAPGTLYAN 60

Query: 239 ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 418
           ETYQLQVDFPE+YPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 419 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 541
           LSMLSSST KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTTKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


Top