BLASTX nr result

ID: Dioscorea21_contig00009623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009623
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08714.1| ribosomal protein L18A [Hyacinthus orientalis]         127   7e-28
gb|AEO32557.1| hypothetical protein [Amblyomma maculatum]             126   2e-27
ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinu...   124   6e-27
ref|XP_002893593.1| 60S ribosomal protein L18A-1 [Arabidopsis ly...   123   1e-26
ref|XP_002338831.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26

>gb|AAT08714.1| ribosomal protein L18A [Hyacinthus orientalis]
          Length = 178

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = -3

Query: 248 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKVRPPTRKLKTTFKASRPNL 69
           RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVF+KVRPPTRKLKTTFKASRPNL
Sbjct: 117 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTFKASRPNL 176

Query: 68  FM 63
           FM
Sbjct: 177 FM 178


>gb|AEO32557.1| hypothetical protein [Amblyomma maculatum]
          Length = 195

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/62 (96%), Positives = 62/62 (100%)
 Frame = -3

Query: 248 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKVRPPTRKLKTTFKASRPNL 69
           RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVF+KVRPPTRKLKTTFKA+RPNL
Sbjct: 134 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTFKATRPNL 193

Query: 68  FM 63
           FM
Sbjct: 194 FM 195


>ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinus communis]
           gi|223541115|gb|EEF42671.1| 60S ribosomal protein L18a,
           putative [Ricinus communis]
          Length = 303

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -3

Query: 248 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKVRPPTRKLKTTFKASRPNL 69
           RVRFPCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KASRPNL
Sbjct: 242 RVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNL 301

Query: 68  FM 63
           FM
Sbjct: 302 FM 303


>ref|XP_002893593.1| 60S ribosomal protein L18A-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297339435|gb|EFH69852.1| 60S ribosomal protein L18A-1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/62 (93%), Positives = 61/62 (98%)
 Frame = -3

Query: 248 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKVRPPTRKLKTTFKASRPNL 69
           RVRFPCIQIIKTAT+PA LCKRESTKQFH+SKIKFPLVFRKVRPPTRKLKTTFKAS+PNL
Sbjct: 253 RVRFPCIQIIKTATVPANLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKASKPNL 312

Query: 68  FM 63
           FM
Sbjct: 313 FM 314


>ref|XP_002338831.1| predicted protein [Populus trichocarpa] gi|222873580|gb|EEF10711.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/62 (93%), Positives = 62/62 (100%)
 Frame = -3

Query: 248 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKVRPPTRKLKTTFKASRPNL 69
           RVRFPCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTT+KASRPNL
Sbjct: 52  RVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNL 111

Query: 68  FM 63
           FM
Sbjct: 112 FM 113


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