BLASTX nr result

ID: Dioscorea21_contig00009619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009619
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO32557.1| hypothetical protein [Amblyomma maculatum]              87   1e-15
gb|AAT08714.1| ribosomal protein L18A [Hyacinthus orientalis]          87   1e-15
ref|NP_180995.1| 60S ribosomal protein L18a-2 [Arabidopsis thali...    86   3e-15
ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinu...    86   5e-15
ref|XP_002338831.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15

>gb|AEO32557.1| hypothetical protein [Amblyomma maculatum]
          Length = 195

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 552 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKV 427
           RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVF+KV
Sbjct: 134 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKV 175


>gb|AAT08714.1| ribosomal protein L18A [Hyacinthus orientalis]
          Length = 178

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 552 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKV 427
           RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVF+KV
Sbjct: 117 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKV 158


>ref|NP_180995.1| 60S ribosomal protein L18a-2 [Arabidopsis thaliana]
           gi|297826909|ref|XP_002881337.1| 60S ribosomal protein
           L18A [Arabidopsis lyrata subsp. lyrata]
           gi|21431842|sp|P51418.2|R18A2_ARATH RecName: Full=60S
           ribosomal protein L18a-2 gi|3128228|gb|AAC26708.1| 60S
           ribosomal protein L18A [Arabidopsis thaliana]
           gi|14596031|gb|AAK68743.1| Unknown protein [Arabidopsis
           thaliana] gi|20197170|gb|AAM14956.1| 60S ribosomal
           protein L18A [Arabidopsis thaliana]
           gi|21539567|gb|AAM53336.1| 60S ribosomal protein L18A
           [Arabidopsis thaliana] gi|23197736|gb|AAN15395.1| 60S
           ribosomal protein L18A [Arabidopsis thaliana]
           gi|30102898|gb|AAP21367.1| At2g34480 [Arabidopsis
           thaliana] gi|297327176|gb|EFH57596.1| 60S ribosomal
           protein L18A [Arabidopsis lyrata subsp. lyrata]
           gi|330253886|gb|AEC08980.1| 60S ribosomal protein L18a-2
           [Arabidopsis thaliana]
          Length = 178

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = -3

Query: 552 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKV 427
           RVRFPCIQIIKTAT+PAKLCKRESTKQFH+SKIKFPLVFRKV
Sbjct: 117 RVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKV 158


>ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinus communis]
           gi|223541115|gb|EEF42671.1| 60S ribosomal protein L18a,
           putative [Ricinus communis]
          Length = 303

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = -3

Query: 552 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKV 427
           RVRFPCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVF+KV
Sbjct: 242 RVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKV 283


>ref|XP_002338831.1| predicted protein [Populus trichocarpa] gi|222873580|gb|EEF10711.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = -3

Query: 552 RVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFRKV 427
           RVRFPCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVF+KV
Sbjct: 52  RVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKV 93