BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009558
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   260   4e-67
ref|NP_566542.1| nuclear pore complex protein Nup53 [Arabidopsis...   246   6e-63
ref|XP_002885134.1| mitotic phosphoprotein N [Arabidopsis lyrata...   246   6e-63
gb|AAL49847.1| unknown protein [Arabidopsis thaliana]                 244   2e-62
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]   243   4e-62

>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
           gi|297743215|emb|CBI36082.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  260 bits (664), Expect = 4e-67
 Identities = 157/329 (47%), Positives = 193/329 (58%), Gaps = 6/329 (1%)
 Frame = +3

Query: 12  SNAIEAMSGSSRQSPFFRDLASPIPAHRTASRFATPGQAAAVSALRRENLAAISDIPPPP 191
           S  ++    S RQS FF+DLASP+ + R   +F + GQAAAVSAL  +N A  SD+PPPP
Sbjct: 2   STTVQRTPRSGRQSLFFQDLASPVSSRR--GKFTSSGQAAAVSALWHDNFAG-SDLPPPP 58

Query: 192 VFTLDDRADFXXXXXXXXXXXXXXXXXXXXXX-----KVWVEDGMGGT-AQQSPGGVPSW 353
           ++TL+DR+DF                           + ++    G + A  S   +  W
Sbjct: 59  MYTLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTSSASLSWW 118

Query: 354 LXXXXXXXXXXXXXXXXVNGVVQSGALVMLXXXXXXXXXXAPKSSLPTGGLDEEEWVTVY 533
                            V GVVQ GAL+ L            ++ LP G LDEEEWVTVY
Sbjct: 119 SPAKSGGDQEEKGKGSPVEGVVQPGALITLPPPREVARPEMQRNCLPAGNLDEEEWVTVY 178

Query: 534 GFFPGDINLVLREFEKCGLILKHVFGPRDANWMHILYQNRYDAQKALQKNGMQINSVLIV 713
           GF PGD NLVLREFEKCG+ILKHV GPRDANW+HILYQNR DAQKAL KNGMQIN VLIV
Sbjct: 179 GFSPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALSKNGMQINGVLIV 238

Query: 714 GVKPVDHTQRQYLDAKINSSGLGGFTASLHPLSANGRSSDVFPIGGTSRPSYLKASMTAT 893
           GVKP+D  QRQ L+ ++N+ G         P  A+ RS +  P+  + RP YL+    A 
Sbjct: 239 GVKPLDPMQRQALNERLNNQGF-----MTLPPPASSRSLESNPLRVSPRPYYLQNGSNAR 293

Query: 894 ADSKPKSNGAIASPAKSVVSKVMDLMFGV 980
                +S+GAIASPAKSVVSK+MDLMFGV
Sbjct: 294 -----QSSGAIASPAKSVVSKIMDLMFGV 317


>ref|NP_566542.1| nuclear pore complex protein Nup53 [Arabidopsis thaliana]
           gi|2062172|gb|AAB63646.1| unknown protein [Arabidopsis
           thaliana] gi|9279713|dbj|BAB01270.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|21592552|gb|AAM64501.1| unknown [Arabidopsis
           thaliana] gi|26983840|gb|AAN86172.1| unknown protein
           [Arabidopsis thaliana] gi|332642275|gb|AEE75796.1|
           nuclear pore complex protein Nup53 [Arabidopsis
           thaliana]
          Length = 329

 Score =  246 bits (628), Expect = 6e-63
 Identities = 159/334 (47%), Positives = 186/334 (55%), Gaps = 20/334 (5%)
 Frame = +3

Query: 39  SSRQSPFFRDLASPIPAHRTASRFATPGQAAAVSALRRENLAAISDIPPPPVFTLDDRAD 218
           S RQS  F+DLASP+ A R   +F++PGQAAAVSAL REN    SD+PPPP++TLDDR+D
Sbjct: 11  SGRQSLLFQDLASPVSARR--GKFSSPGQAAAVSALWRENFGG-SDLPPPPMYTLDDRSD 67

Query: 219 FXXXXXXXXXXXXXXXXXXXXXX-----KVWVEDGMGG----------TAQQSP--GGVP 347
           F                           K  V  G G            AQQS    G P
Sbjct: 68  FSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQVSGSP 127

Query: 348 SWLXXXXXXXXXXXXXXXX---VNGVVQSGALVMLXXXXXXXXXXAPKSSLPTGGLDEEE 518
           SW                    V GVVQ GALV L            +  +PTG LDEEE
Sbjct: 128 SWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNLDEEE 187

Query: 519 WVTVYGFFPGDINLVLREFEKCGLILKHVFGPRDANWMHILYQNRYDAQKALQKNGMQIN 698
           WVTVYGF PGD NLVLREFEKCG++LKHV GPR+ANWMHILYQNR DA KAL K GM IN
Sbjct: 188 WVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAGMMIN 247

Query: 699 SVLIVGVKPVDHTQRQYLDAKINSSGLGGFTASLHPLSANGRSSDVFPIGGTSRPSYLKA 878
            V+IVGVKPVD  Q+Q L+ ++N+    GF     P S    +  +      SRP YL+ 
Sbjct: 248 GVVIVGVKPVDPIQKQALNERLNNQ---GFMPLPPPSSTRNTARPL------SRPQYLQ- 297

Query: 879 SMTATADSKPKSNGAIASPAKSVVSKVMDLMFGV 980
               +A S   S GA+ASP+KS+VSK  DLMFGV
Sbjct: 298 --NGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329


>ref|XP_002885134.1| mitotic phosphoprotein N [Arabidopsis lyrata subsp. lyrata]
           gi|297330974|gb|EFH61393.1| mitotic phosphoprotein N
           [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  246 bits (628), Expect = 6e-63
 Identities = 159/334 (47%), Positives = 186/334 (55%), Gaps = 20/334 (5%)
 Frame = +3

Query: 39  SSRQSPFFRDLASPIPAHRTASRFATPGQAAAVSALRRENLAAISDIPPPPVFTLDDRAD 218
           S RQS  F+DLASP+ A R   +F++PGQAAAVSAL REN    SD+PPPP++TLDDR+D
Sbjct: 11  SGRQSLLFQDLASPVSARR--GKFSSPGQAAAVSALWRENFGG-SDLPPPPMYTLDDRSD 67

Query: 219 FXXXXXXXXXXXXXXXXXXXXXX-----KVWVEDGMGG----------TAQQSP--GGVP 347
           F                           K  V  G G            AQQS    G P
Sbjct: 68  FSPESGIADYSASPDAKSDRRMPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQISGSP 127

Query: 348 SWLXXXXXXXXXXXXXXXX---VNGVVQSGALVMLXXXXXXXXXXAPKSSLPTGGLDEEE 518
           SW                    V GVVQ GALV L            +  +PTG LDEEE
Sbjct: 128 SWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNLDEEE 187

Query: 519 WVTVYGFFPGDINLVLREFEKCGLILKHVFGPRDANWMHILYQNRYDAQKALQKNGMQIN 698
           WVTVYGF PGD NLVLREFEKCG++LKHV GPR+ANWMHILYQNR DA KAL K GM IN
Sbjct: 188 WVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAGMMIN 247

Query: 699 SVLIVGVKPVDHTQRQYLDAKINSSGLGGFTASLHPLSANGRSSDVFPIGGTSRPSYLKA 878
            V+IVGVKPVD  Q+Q L+ ++N+    GF     P S    +  +      SRP YL+ 
Sbjct: 248 GVVIVGVKPVDPIQKQALNERLNNQ---GFVPLPPPSSTRDTARPL------SRPQYLQ- 297

Query: 879 SMTATADSKPKSNGAIASPAKSVVSKVMDLMFGV 980
               +A S   S GA+ASP+KS+VSK  DLMFGV
Sbjct: 298 --NGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329


>gb|AAL49847.1| unknown protein [Arabidopsis thaliana]
          Length = 329

 Score =  244 bits (624), Expect = 2e-62
 Identities = 158/333 (47%), Positives = 185/333 (55%), Gaps = 20/333 (6%)
 Frame = +3

Query: 39  SSRQSPFFRDLASPIPAHRTASRFATPGQAAAVSALRRENLAAISDIPPPPVFTLDDRAD 218
           S RQS  F+DLASP+ A R   +F++PGQAAAVSAL REN    SD+PPPP++TLDDR+D
Sbjct: 11  SGRQSLLFQDLASPVSARR--GKFSSPGQAAAVSALWRENFGG-SDLPPPPMYTLDDRSD 67

Query: 219 FXXXXXXXXXXXXXXXXXXXXXX-----KVWVEDGMGG----------TAQQSP--GGVP 347
           F                           K  V  G G            AQQS    G P
Sbjct: 68  FSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQVSGSP 127

Query: 348 SWLXXXXXXXXXXXXXXXX---VNGVVQSGALVMLXXXXXXXXXXAPKSSLPTGGLDEEE 518
           SW                    V GVVQ GALV L            +  +PTG LDEEE
Sbjct: 128 SWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNLDEEE 187

Query: 519 WVTVYGFFPGDINLVLREFEKCGLILKHVFGPRDANWMHILYQNRYDAQKALQKNGMQIN 698
           WVTVYGF PGD NLVLREFEKCG++LKHV GPR+ANWMHILYQNR DA KAL K GM IN
Sbjct: 188 WVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAGMMIN 247

Query: 699 SVLIVGVKPVDHTQRQYLDAKINSSGLGGFTASLHPLSANGRSSDVFPIGGTSRPSYLKA 878
            V+IVGVKPVD  Q+Q L+ ++N+    GF     P S    +  +      SRP YL+ 
Sbjct: 248 GVVIVGVKPVDPIQKQALNERLNNQ---GFMPLPPPSSTRNTARPL------SRPQYLQ- 297

Query: 879 SMTATADSKPKSNGAIASPAKSVVSKVMDLMFG 977
               +A S   S GA+ASP+KS+VSK  DLMFG
Sbjct: 298 --NGSAFSPQPSGGAMASPSKSMVSKFFDLMFG 328


>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score =  243 bits (621), Expect = 4e-62
 Identities = 156/345 (45%), Positives = 191/345 (55%), Gaps = 22/345 (6%)
 Frame = +3

Query: 12  SNAIEAMSGSSRQSPFFRDLASPIPAHRTASRFATPGQAAAVSALRRENLAAISDIPPPP 191
           S  ++    SSR S FF+DLASP+ A R   +F++PGQAAAVS+L REN  + SD+PPPP
Sbjct: 2   STTVQRTPRSSRHSLFFQDLASPVSARR--GKFSSPGQAAAVSSLWRENFGS-SDLPPPP 58

Query: 192 VFTLDDRA-------------------DFXXXXXXXXXXXXXXXXXXXXXXKVWVEDGMG 314
           VFTL+DR+                   D                         +   G+ 
Sbjct: 59  VFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQ 118

Query: 315 GTAQQSPGGVPSW---LXXXXXXXXXXXXXXXXVNGVVQSGALVMLXXXXXXXXXXAPKS 485
              Q SPG   SW                    V GVVQ GAL+ L            ++
Sbjct: 119 QNQQGSPG--LSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRN 176

Query: 486 SLPTGGLDEEEWVTVYGFFPGDINLVLREFEKCGLILKHVFGPRDANWMHILYQNRYDAQ 665
           SLP G L+EEEWVTVYGF PGD N+VLREFEKCG ILKHV GPRDANW+HILYQNR DA 
Sbjct: 177 SLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAH 236

Query: 666 KALQKNGMQINSVLIVGVKPVDHTQRQYLDAKINSSGLGGFTASLHPLSANGRSSDVFPI 845
           KAL KNGMQIN VLIVGVK +D  QRQ L+ ++ + G         PL A+ R+S+V  +
Sbjct: 237 KALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPL-----PL-ASARNSEVSTL 290

Query: 846 GGTSRPSYLKASMTATADSKPKSNGAIASPAKSVVSKVMDLMFGV 980
              SRP YL+   +       ++ G IASP KS+VSK+MDLMFGV
Sbjct: 291 KAPSRPYYLQNGNSTAR----QTGGTIASPTKSLVSKIMDLMFGV 331