BLASTX nr result

ID: Dioscorea21_contig00009551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009551
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    66   3e-09
ref|XP_002531628.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|NP_001051053.1| Os03g0711100 [Oryza sativa Japonica Group] g...    59   3e-07
dbj|BAJ87752.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   7e-07
dbj|BAJ89584.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   7e-07

>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
 Frame = +3

Query: 3   QRVRLKTSA---PSVLKLDDG-PAWHQAITRKARTPRP-KPGVTTSVKSEPV----VPDL 155
           +RVRLKT++   P    L++  P+WHQ  TRKARTPR  KP    + KS+ +    +P +
Sbjct: 57  ERVRLKTASLKLPGADSLENSMPSWHQGFTRKARTPRHGKPAAHPAFKSDELTRNPLPFV 116

Query: 156 EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCS 254
             + ADE +  + ++ + +RVP FDP +AE C+
Sbjct: 117 PEIGADETSYDDNEEQLLYRVPIFDPFVAELCA 149


>ref|XP_002531628.1| conserved hypothetical protein [Ricinus communis]
           gi|223528746|gb|EEF30756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 468

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 20/105 (19%)
 Frame = +3

Query: 3   QRVRLKTSAPSVLKLDDG-------PAWHQAITRKARTPRPKPG---VTTSVKSE----- 137
           +RVRLK S+   L +          P+WHQ  TRKARTPR   G   + + +K E     
Sbjct: 57  ERVRLKISSLKSLDIISKGSSVITVPSWHQGFTRKARTPRNGHGNKPLLSLLKIEEKSRN 116

Query: 138 --PVVPDL---EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCSP 257
             P+VP++   + +S ++NN  EE+QL+Y RVP FDP +AE C+P
Sbjct: 117 PIPLVPEVGSDDQISHEDNN--EEEQLLY-RVPIFDPFVAELCTP 158


>ref|NP_001051053.1| Os03g0711100 [Oryza sativa Japonica Group]
           gi|62733537|gb|AAX95654.1| CCT motif, putative [Oryza
           sativa Japonica Group] gi|108710714|gb|ABF98509.1| CCT
           motif family protein, expressed [Oryza sativa Japonica
           Group] gi|113549524|dbj|BAF12967.1| Os03g0711100 [Oryza
           sativa Japonica Group] gi|125545468|gb|EAY91607.1|
           hypothetical protein OsI_13241 [Oryza sativa Indica
           Group] gi|215767842|dbj|BAH00071.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 421

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
 Frame = +3

Query: 51  DGPAWHQAITRKARTPRPKPG---------VTTSVKSEPVVPDLEA-----VSADENNVG 188
           D PAW   + R+ RTPR KPG          T +  +   VPDLEA     V   +++VG
Sbjct: 87  DAPAWLHGLKRRPRTPRTKPGGGGKHDASAATVAAAAASAVPDLEAEESGIVGDTDHDVG 146

Query: 189 EE-DQLVYHRVPEFDPLLAEFCSP 257
           EE D+ + +RVP FDP+LAE  +P
Sbjct: 147 EEDDEDLLYRVPVFDPMLAELYNP 170


>dbj|BAJ87752.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
 Frame = +3

Query: 45  LDDGPAWHQAITRKARTPRPK-PGVTTSVKSEPVVPDL---EAVSADENNVGEEDQLVYH 212
           LD  PAW +   RKART RP    V   +    VVP++   E+ ++DE    EE+QL+Y 
Sbjct: 156 LDVAPAWPK---RKARTRRPTVKSVGQLLSRRLVVPEVGAGESSTSDERRAPEEEQLLY- 211

Query: 213 RVPEFDPLLAEFCSPDP 263
           RVP FDP L EFCSP P
Sbjct: 212 RVPVFDPALGEFCSPPP 228


>dbj|BAJ89584.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 430

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
 Frame = +3

Query: 45  LDDGPAWHQAITRKARTPRPK-PGVTTSVKSEPVVPDL---EAVSADENNVGEEDQLVYH 212
           LD  PAW +   RKART RP    V   +    VVP++   E+ ++DE    EE+QL+Y 
Sbjct: 156 LDVAPAWPK---RKARTRRPTVKSVGQLLSRRLVVPEVGAGESSTSDERRAPEEEQLLY- 211

Query: 213 RVPEFDPLLAEFCSPDP 263
           RVP FDP L EFCSP P
Sbjct: 212 RVPVFDPALGEFCSPPP 228


Top