BLASTX nr result

ID: Dioscorea21_contig00009546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009546
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] g...   148   4e-34
gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japo...   148   4e-34
emb|CAO82945.1| putative pre-mRNA-splicing factor cwc-22 [Oryza ...   148   4e-34
emb|CAO82944.1| putative pre-mRNA-splicing factor cwc-22 [Oryza ...   148   4e-34
emb|CAO82943.1| putative pre-mRNA-splicing factor cwc-22 [Oryza ...   148   4e-34

>ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group]
           gi|77554176|gb|ABA96972.1| Pre-mRNA splicing factor
           cwc22, putative, expressed [Oryza sativa Japonica Group]
           gi|113649014|dbj|BAF29526.1| Os12g0256300 [Oryza sativa
           Japonica Group] gi|156622336|emb|CAO82941.1| putative
           pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica
           Group] gi|215707245|dbj|BAG93705.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -1

Query: 509 IFIKILFQELSEHLGIRLLNERLNEPTMKDSFDSIFPKDHPKNTRFAINFFTSIGLGGIT 330
           IFIKILFQELSEHLGIRLLNE+LN+P M+DSFDSIFPKDHPKNTRF+INFFTSIGLGGIT
Sbjct: 670 IFIKILFQELSEHLGIRLLNEKLNDPNMQDSFDSIFPKDHPKNTRFSINFFTSIGLGGIT 729

Query: 329 ESLREHLKNMPRIIMEQQK 273
           E+LRE+LKNMPR+IM+QQK
Sbjct: 730 ETLREYLKNMPRLIMQQQK 748


>gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -1

Query: 509  IFIKILFQELSEHLGIRLLNERLNEPTMKDSFDSIFPKDHPKNTRFAINFFTSIGLGGIT 330
            IFIKILFQELSEHLGIRLLNE+LN+P M+DSFDSIFPKDHPKNTRF+INFFTSIGLGGIT
Sbjct: 886  IFIKILFQELSEHLGIRLLNEKLNDPNMQDSFDSIFPKDHPKNTRFSINFFTSIGLGGIT 945

Query: 329  ESLREHLKNMPRIIMEQQK 273
            E+LRE+LKNMPR+IM+QQK
Sbjct: 946  ETLREYLKNMPRLIMQQQK 964


>emb|CAO82945.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Indica
           Group]
          Length = 746

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -1

Query: 509 IFIKILFQELSEHLGIRLLNERLNEPTMKDSFDSIFPKDHPKNTRFAINFFTSIGLGGIT 330
           IFIKILFQELSEHLGIRLLNE+LN+P M+DSFDSIFPKDHPKNTRF+INFFTSIGLGGIT
Sbjct: 629 IFIKILFQELSEHLGIRLLNEKLNDPNMQDSFDSIFPKDHPKNTRFSINFFTSIGLGGIT 688

Query: 329 ESLREHLKNMPRIIMEQQK 273
           E+LRE+LKNMPR+IM+QQK
Sbjct: 689 ETLREYLKNMPRLIMQQQK 707


>emb|CAO82944.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Indica
           Group]
          Length = 736

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -1

Query: 509 IFIKILFQELSEHLGIRLLNERLNEPTMKDSFDSIFPKDHPKNTRFAINFFTSIGLGGIT 330
           IFIKILFQELSEHLGIRLLNE+LN+P M+DSFDSIFPKDHPKNTRF+INFFTSIGLGGIT
Sbjct: 619 IFIKILFQELSEHLGIRLLNEKLNDPNMQDSFDSIFPKDHPKNTRFSINFFTSIGLGGIT 678

Query: 329 ESLREHLKNMPRIIMEQQK 273
           E+LRE+LKNMPR+IM+QQK
Sbjct: 679 ETLREYLKNMPRLIMQQQK 697


>emb|CAO82943.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica
           Group]
          Length = 615

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -1

Query: 509 IFIKILFQELSEHLGIRLLNERLNEPTMKDSFDSIFPKDHPKNTRFAINFFTSIGLGGIT 330
           IFIKILFQELSEHLGIRLLNE+LN+P M+DSFDSIFPKDHPKNTRF+INFFTSIGLGGIT
Sbjct: 498 IFIKILFQELSEHLGIRLLNEKLNDPNMQDSFDSIFPKDHPKNTRFSINFFTSIGLGGIT 557

Query: 329 ESLREHLKNMPRIIMEQQK 273
           E+LRE+LKNMPR+IM+QQK
Sbjct: 558 ETLREYLKNMPRLIMQQQK 576


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