BLASTX nr result

ID: Dioscorea21_contig00009537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009537
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282974.1| PREDICTED: 60S ribosomal protein L37a-like [...   171   6e-41
gb|AFW90557.1| 60S ribosomal protein L37a [Solanum tuberosum]         169   2e-40
ref|NP_001236889.1| uncharacterized protein LOC100499850 [Glycin...   169   2e-40
ref|XP_002329548.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
emb|CAI48073.1| 60S ribosomal protein L37a [Capsicum chinense]        169   2e-40

>ref|XP_002282974.1| PREDICTED: 60S ribosomal protein L37a-like [Vitis vinifera]
           gi|449432368|ref|XP_004133971.1| PREDICTED: 60S
           ribosomal protein L37a-like [Cucumis sativus]
           gi|449442329|ref|XP_004138934.1| PREDICTED: 60S
           ribosomal protein L37a-like [Cucumis sativus]
           gi|449461277|ref|XP_004148368.1| PREDICTED: 60S
           ribosomal protein L37a-like [Cucumis sativus]
           gi|449487554|ref|XP_004157684.1| PREDICTED: 60S
           ribosomal protein L37a-like [Cucumis sativus]
           gi|449505246|ref|XP_004162415.1| PREDICTED: 60S
           ribosomal protein L37a-like [Cucumis sativus]
           gi|449524647|ref|XP_004169333.1| PREDICTED: 60S
           ribosomal protein L37a-like [Cucumis sativus]
          Length = 92

 Score =  171 bits (433), Expect = 6e-41
 Identities = 89/118 (75%), Positives = 91/118 (77%)
 Frame = -3

Query: 356 MTKRTKKAGIVGKYGTRYGASLRXXXXXXXXXXXXXXXXXXXXXYGASLRKQIKKMEVSQ 177
           MTKRTKKAGIVGKYGTRYGASL                           RKQIKKMEVSQ
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASL---------------------------RKQIKKMEVSQ 33

Query: 176 HAKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRDQTE 3
           H+KYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR+QTE
Sbjct: 34  HSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>gb|AFW90557.1| 60S ribosomal protein L37a [Solanum tuberosum]
          Length = 92

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/118 (74%), Positives = 91/118 (77%)
 Frame = -3

Query: 356 MTKRTKKAGIVGKYGTRYGASLRXXXXXXXXXXXXXXXXXXXXXYGASLRKQIKKMEVSQ 177
           MTKRTKKAGIVG+YGTRYGASL                           RKQIKKMEVSQ
Sbjct: 1   MTKRTKKAGIVGEYGTRYGASL---------------------------RKQIKKMEVSQ 33

Query: 176 HAKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRDQTE 3
           H+KYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR+QTE
Sbjct: 34  HSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>ref|NP_001236889.1| uncharacterized protein LOC100499850 [Glycine max]
           gi|356497076|ref|XP_003517390.1| PREDICTED: 60S
           ribosomal protein L37a-like [Glycine max]
           gi|255627121|gb|ACU13905.1| unknown [Glycine max]
           gi|388499112|gb|AFK37622.1| unknown [Lotus japonicus]
          Length = 92

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/118 (74%), Positives = 91/118 (77%)
 Frame = -3

Query: 356 MTKRTKKAGIVGKYGTRYGASLRXXXXXXXXXXXXXXXXXXXXXYGASLRKQIKKMEVSQ 177
           MTKRTKKAGIVGKYGTRYGASL                           RKQIKKMEVSQ
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASL---------------------------RKQIKKMEVSQ 33

Query: 176 HAKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRDQTE 3
           H+K+FCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR+QTE
Sbjct: 34  HSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>ref|XP_002329548.1| predicted protein [Populus trichocarpa]
           gi|224136378|ref|XP_002326845.1| predicted protein
           [Populus trichocarpa] gi|224138784|ref|XP_002326689.1|
           predicted protein [Populus trichocarpa]
           gi|255571073|ref|XP_002526487.1| 60S ribosomal protein
           L37a, putative [Ricinus communis]
           gi|356504539|ref|XP_003521053.1| PREDICTED: 60S
           ribosomal protein L37a-like [Glycine max]
           gi|356511083|ref|XP_003524259.1| PREDICTED: 60S
           ribosomal protein L37a [Glycine max]
           gi|356520742|ref|XP_003529019.1| PREDICTED: 60S
           ribosomal protein L37a-like [Glycine max]
           gi|356563414|ref|XP_003549958.1| PREDICTED: 60S
           ribosomal protein L37a-like [Glycine max]
           gi|357477067|ref|XP_003608819.1| 60S ribosomal protein
           L37a [Medicago truncatula] gi|118483026|gb|ABK93424.1|
           unknown [Populus trichocarpa]
           gi|118484983|gb|ABK94356.1| unknown [Populus
           trichocarpa] gi|217071074|gb|ACJ83897.1| unknown
           [Medicago truncatula] gi|222834011|gb|EEE72488.1|
           predicted protein [Populus trichocarpa]
           gi|222835160|gb|EEE73595.1| predicted protein [Populus
           trichocarpa] gi|222870257|gb|EEF07388.1| predicted
           protein [Populus trichocarpa]
           gi|223534162|gb|EEF35878.1| 60S ribosomal protein L37a,
           putative [Ricinus communis] gi|355509874|gb|AES91016.1|
           60S ribosomal protein L37a [Medicago truncatula]
           gi|388494042|gb|AFK35087.1| unknown [Medicago
           truncatula] gi|388514345|gb|AFK45234.1| unknown
           [Medicago truncatula] gi|388520787|gb|AFK48455.1|
           unknown [Medicago truncatula]
          Length = 92

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/118 (74%), Positives = 91/118 (77%)
 Frame = -3

Query: 356 MTKRTKKAGIVGKYGTRYGASLRXXXXXXXXXXXXXXXXXXXXXYGASLRKQIKKMEVSQ 177
           MTKRTKKAGIVGKYGTRYGASL                           RKQIKKMEVSQ
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASL---------------------------RKQIKKMEVSQ 33

Query: 176 HAKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRDQTE 3
           H+K+FCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR+QTE
Sbjct: 34  HSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>emb|CAI48073.1| 60S ribosomal protein L37a [Capsicum chinense]
          Length = 92

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/118 (74%), Positives = 91/118 (77%)
 Frame = -3

Query: 356 MTKRTKKAGIVGKYGTRYGASLRXXXXXXXXXXXXXXXXXXXXXYGASLRKQIKKMEVSQ 177
           MTKRTKKAGIVGKYGTRYGASL                           RKQIKKMEVSQ
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASL---------------------------RKQIKKMEVSQ 33

Query: 176 HAKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRDQTE 3
           H++YFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR+QTE
Sbjct: 34  HSEYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


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