BLASTX nr result

ID: Dioscorea21_contig00009519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009519
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...    67   5e-09
ref|XP_003519330.1| PREDICTED: HMG-Y-related protein A-like [Gly...    65   2e-08
ref|XP_002531913.1| Histone H1, putative [Ricinus communis] gi|2...    65   2e-08
ref|XP_003574504.1| PREDICTED: HMG-Y-related protein A-like [Bra...    65   4e-08
emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]    65   4e-08

>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +2

Query: 110 SNEEHPQPATLPPYSEMIMAAIDALDEKNGSNKSAISKYMESTYGE 247
           + EE  +P +LPPY EM+M A+DAL+E +GSNKSAISKY+ESTYGE
Sbjct: 2   ATEEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGE 47


>ref|XP_003519330.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 176

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = +2

Query: 110 SNEEHPQPATLPPYSEMIMAAIDALDEKNGSNKSAISKYMESTYGE 247
           + EE  +P +LPPY EMI+ A++AL+E NGSNKSAISKY+E+TYGE
Sbjct: 2   ATEEVNKPQSLPPYPEMIVKALEALNEPNGSNKSAISKYIETTYGE 47


>ref|XP_002531913.1| Histone H1, putative [Ricinus communis] gi|223528423|gb|EEF30457.1|
           Histone H1, putative [Ricinus communis]
          Length = 166

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 40/48 (83%)
 Frame = +2

Query: 104 MASNEEHPQPATLPPYSEMIMAAIDALDEKNGSNKSAISKYMESTYGE 247
           MA+  E  +P TLPPY +MI+AAI ALD+KNGSNK++ISKY+ES YG+
Sbjct: 1   MAAAGEVYKPPTLPPYPQMILAAIAALDDKNGSNKTSISKYIESKYGD 48


>ref|XP_003574504.1| PREDICTED: HMG-Y-related protein A-like [Brachypodium distachyon]
          Length = 174

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = +2

Query: 110 SNEEHPQPATLPPYSEMIMAAIDALDEKNGSNKSAISKYMESTYGE 247
           + EE P+PA LPPY EMI+ AI+AL++K GSNKSAISK++E  YG+
Sbjct: 2   ATEEAPKPAPLPPYPEMILEAIEALNDKQGSNKSAISKHIEGKYGD 47


>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 33/51 (64%), Positives = 45/51 (88%), Gaps = 3/51 (5%)
 Frame = +2

Query: 104 MASNEEH--PQP-ATLPPYSEMIMAAIDALDEKNGSNKSAISKYMESTYGE 247
           MA+ E +  PQP +++P YSEMIMAAI+AL++K+GSNKS+ISKY+ESTYG+
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGD 51


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