BLASTX nr result

ID: Dioscorea21_contig00009514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009514
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADO00337.1| RING protein [Elaeis guineensis]                       121   1e-25
ref|XP_002313898.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
dbj|BAJ88158.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   2e-19
ref|XP_002262757.1| PREDICTED: uncharacterized protein LOC100249...   100   4e-19
emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera]   100   4e-19

>gb|ADO00337.1| RING protein [Elaeis guineensis]
          Length = 281

 Score =  121 bits (304), Expect = 1e-25
 Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 10/132 (7%)
 Frame = -1

Query: 641 ISWDEFIVTSDFNLMDSVNWEAEN----------LTNFTVQARGTSSFDELQKKKSPGLS 492
           IS  E  V++DF + +S +WE+E             + T  A    S   + KKK PGLS
Sbjct: 154 ISSGELAVSNDFIISNSADWESETPGEWFESGVPYRDLTHDAEDVYSLQNVCKKKPPGLS 213

Query: 491 WDTLCSLCQEVYTDAVVTDGVTQASLECGICLEKFMLGDELIKLQCGHRFHLTCLEPWVR 312
           W+ +CSL  EV+  A    G T    EC ICLEKF+ GDELI+L CGHRFH TCLEPWV 
Sbjct: 214 WEAICSLQLEVFKYA--EKGGTLP--ECSICLEKFLEGDELIQLCCGHRFHFTCLEPWVW 269

Query: 311 SSGDCPYCRASI 276
           + GDCPYCRASI
Sbjct: 270 ACGDCPYCRASI 281


>ref|XP_002313898.1| predicted protein [Populus trichocarpa] gi|222850306|gb|EEE87853.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = -1

Query: 524 ELQKKKSPGLSWDTLCSLCQEVYTDAV--VTDGVTQASLECGICLEKFMLGDELIKLQCG 351
           E  KKK PGL+ D L  L  EV++     +  GV+Q S +C ICLE F  GDELI+L C 
Sbjct: 144 ESHKKKPPGLTQDALHCLQSEVFSSVEKGIEGGVSQVSWDCSICLESFTEGDELIRLPCE 203

Query: 350 HRFHLTCLEPWVRSSGDCPYCRASII 273
           HRFH  CL+PWVR+ GDCPYCR  ++
Sbjct: 204 HRFHSACLDPWVRTCGDCPYCRRDVV 229


>dbj|BAJ88158.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 275

 Score =  100 bits (249), Expect = 2e-19
 Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
 Frame = -1

Query: 644 AISWDEFIVTSDFNLMDSVNWEAENLTNF----TVQARGTSSFDELQK-------KKSPG 498
           +I+ DEF  T  F ++D  + EA   TN+    +VQ    S  + L+         +SPG
Sbjct: 139 SITLDEFSATDVFRIIDFGSREAPYETNWPSSSSVQPSSGSDEENLENPLISSTSNRSPG 198

Query: 497 LSWDTLCSLCQEVYTDAVVTDGVTQASLECGICLEKFMLGDELIKLQCGHRFHLTCLEPW 318
           LS      L  E++      D   +AS EC ICL+ F  GDELI+L+CGHRFH TCLEPW
Sbjct: 199 LSKSAFLRLQIEIFE--AKKDDNREASPECSICLDGFYDGDELIRLRCGHRFHSTCLEPW 256

Query: 317 VRSSGDCPYCRASI 276
           VR   DCPYCR +I
Sbjct: 257 VRKCADCPYCRTNI 270


>ref|XP_002262757.1| PREDICTED: uncharacterized protein LOC100249808 [Vitis vinifera]
           gi|296083083|emb|CBI22487.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
 Frame = -1

Query: 632 DEFIVTSDFNLMDSVNWEAENLTNFTVQARGTSS------FDELQKKKSPGLSWDTLCSL 471
           D+F    DF L+D  +W    LT  T  +   S         E  KKK PGL+ + L SL
Sbjct: 149 DDFTFGDDFRLIDVGDWSTGWLTGGTPSSDLNSETMLPPLMREPSKKKPPGLTQEALDSL 208

Query: 470 CQEVYTDAV-VTDGVTQASLECGICLEKFMLGDELIKLQCGHRFHLTCLEPWVRSSGDCP 294
            + V++ A    +G+ +AS +C ICL+ +  GD+L  L CGH+FH  CL+PWVR+ GDCP
Sbjct: 209 HRAVFSRAEGAEEGMPRASRDCSICLDGYREGDKLTCLPCGHKFHSACLDPWVRTCGDCP 268

Query: 293 YCRASI 276
           YCR+ I
Sbjct: 269 YCRSVI 274


>emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera]
          Length = 688

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
 Frame = -1

Query: 632 DEFIVTSDFNLMDSVNWEAENLTNFTVQARGTSS------FDELQKKKSPGLSWDTLCSL 471
           D+F    DF L+D  +W    LT  T  +   S         E  KKK PGL+ + L SL
Sbjct: 167 DDFTFGDDFRLIDVGDWSTGWLTGGTPSSDLNSETMLPPLMREPSKKKPPGLTQEALDSL 226

Query: 470 CQEVYTDAV-VTDGVTQASLECGICLEKFMLGDELIKLQCGHRFHLTCLEPWVRSSGDCP 294
            + V++ A    +G+ +AS +C ICL+ +  GD+L  L CGH+FH  CL+PWVR+ GDCP
Sbjct: 227 HRAVFSRAEGAEEGMPRASRDCSICLDGYREGDKLTCLPCGHKFHSACLDPWVRTCGDCP 286

Query: 293 YCRASI 276
           YCR+ I
Sbjct: 287 YCRSVI 292


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