BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009495
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   460   e-156
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   456   e-155
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   456   e-155
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              456   e-155
ref|NP_001146470.1| uncharacterized protein LOC100280058 [Zea ma...   450   e-155

>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  460 bits (1183), Expect(2) = e-156
 Identities = 229/356 (64%), Positives = 280/356 (78%), Gaps = 2/356 (0%)
 Frame = -2

Query: 1426 SQAPSMAKSLDEADVGILCYVSSLPGFRGVLKQRYSDFIVNEVDLDGKIIHLTSFDLPPE 1247
            S A    KS+ E+DVGIL Y+SSLPGFRG+LKQRYSDFIVNEVD DG ++HLTS D PPE
Sbjct: 34   SIAVMTTKSVGESDVGILSYISSLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPE 93

Query: 1246 FSEEKAPEKNPHSSDKDYSGEIEAFRSLSGEVDAESLRDFLEKIVDSEASDVAPIILSPD 1067
                ++     HS+ + Y+ EIE FRSL+G+ DAE L  FL++I      D+ PI+ SPD
Sbjct: 94   VIVSESGPTIVHSTSQSYASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILPIVFSPD 153

Query: 1066 SDKSHRAEVHNFFKRNFKFLVTDTVEEADT--KCVRVRFCSXXXXXXXXXXXXXXXXXXX 893
            +DK+HR  VHNFFK+ FKFLVTDT++  D+  KCVRVR  S                   
Sbjct: 154  TDKTHRTAVHNFFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKER--- 209

Query: 892  XXKNERPFDSRGSDNWPEHLGKFLRFHLFKENKDTQEALGVIGKMLGVQQRSFGFAGTKD 713
                ++PFDSRGSDNWPEH+GKFLRFHL+KENKDTQEALG+IGKMLG+Q RSFGFAGTKD
Sbjct: 210  ---GDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKD 266

Query: 712  KRSISTQRVTIFKQHAKRLAALNSRLIGIKVGDFCYVKEGLVLGQLMGNRFTITLRGVVA 533
            KRSISTQRVT+FKQHA R+AALN RLIGIK+G+F Y++EGL+LGQL+GNRFTITLRGVVA
Sbjct: 267  KRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA 326

Query: 532  ESQDIVKAAADGLSRNGFINYYGLQRFGSGSVPTHMIGAALLKGEWKHAVDLILNP 365
             S+D++KA+A+ L R+GFINY+GLQRFGSGSVPTH++GA+LL+GEWK AV++IL+P
Sbjct: 327  NSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDP 382



 Score =  120 bits (302), Expect(2) = e-156
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = -1

Query: 287 DIDIALRQFPRHLVAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASE 108
           DID  L+Q PR+LVAERA+LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS 
Sbjct: 402 DIDGTLKQLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 461

Query: 107 RVQRH 93
           RVQ++
Sbjct: 462 RVQKY 466


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  456 bits (1174), Expect(2) = e-155
 Identities = 221/355 (62%), Positives = 280/355 (78%), Gaps = 5/355 (1%)
 Frame = -2

Query: 1414 SMAKSLDEADVGILCYVSSLPGFRGVLKQRYSDFIVNEVDLDGKIIHLTSFDLPPEFSE- 1238
            ++  +++E+DVGI CY+S +PGFRG+LKQRYSDFIVNEVD +G ++HLTS  +P E  E 
Sbjct: 47   TLMTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEV 106

Query: 1237 -EKAPEKNPHSSDKDYSGEIEAFRSLSGEVDAESLRDFLEKIVDSE-ASDVAPIILSPDS 1064
             E+  E+  +   K+Y+ EIE+FR L+G+ D + L  F+ +++  +   +++PI+LSPDS
Sbjct: 107  AEEREEEITNQVGKNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDS 166

Query: 1063 DKSHRAEVHNFFKRNFKFLVTDTVE--EADTKCVRVRFCSXXXXXXXXXXXXXXXXXXXX 890
            DK+HR   HNFFK   KFLVTDTV+  +A +KC+RVR  S                    
Sbjct: 167  DKAHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDR--- 223

Query: 889  XKNERPFDSRGSDNWPEHLGKFLRFHLFKENKDTQEALGVIGKMLGVQQRSFGFAGTKDK 710
              N++PFDSRGSD+WPEHLGKFLRFHL+KENKDTQEA+G+IGKMLG+Q RSFGFAGTKDK
Sbjct: 224  --NDKPFDSRGSDHWPEHLGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDK 281

Query: 709  RSISTQRVTIFKQHAKRLAALNSRLIGIKVGDFCYVKEGLVLGQLMGNRFTITLRGVVAE 530
            RS+STQRVT+FKQHA RLAALN RLIGIKVGDFCYV EGL+LGQL+GNRFT+TLRGVVA+
Sbjct: 282  RSVSTQRVTVFKQHASRLAALNDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVAD 341

Query: 529  SQDIVKAAADGLSRNGFINYYGLQRFGSGSVPTHMIGAALLKGEWKHAVDLILNP 365
            S+D +K +AD L R+GFINY+GLQRFGSGSVPTH+IGAALL+GEWK+AV +IL+P
Sbjct: 342  SEDTIKGSADSLGRHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDP 396



 Score =  120 bits (302), Expect(2) = e-155
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = -1

Query: 287 DIDIALRQFPRHLVAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASE 108
           DID  LRQ PR+L AERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS 
Sbjct: 423 DIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 482

Query: 107 RVQRH 93
           RVQ++
Sbjct: 483 RVQKY 487


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  456 bits (1172), Expect(2) = e-155
 Identities = 229/349 (65%), Positives = 270/349 (77%), Gaps = 2/349 (0%)
 Frame = -2

Query: 1405 KSLDEADVGILCYVSSLPGFRGVLKQRYSDFIVNEVDLDGKIIHLTSFDLPPEFSEEKAP 1226
            K L+E+DVGI  Y+S LPGFRG+LKQRY DFIVNEVD DG ++HLTS D PPE S EK  
Sbjct: 2    KHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPE-SMEKNE 60

Query: 1225 EKNPHSSDKDYSGEIEAFRSLSGEVDAESLRDFLEKIVDSEASDVAPIILSPDSDKSHRA 1046
             K    S+K Y+ EIE FRSL G+ D E L+  ++++       V+PI+LS  SDKSHR 
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 1045 EVHNFFKRNFKFLVTDTVEEADT--KCVRVRFCSXXXXXXXXXXXXXXXXXXXXXKNERP 872
             VHNFFK N KFLVTDT++  DT  KC+RVR  S                       ++P
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDR------RDKP 174

Query: 871  FDSRGSDNWPEHLGKFLRFHLFKENKDTQEALGVIGKMLGVQQRSFGFAGTKDKRSISTQ 692
            FDSRGSDNW EH+GKFLRFHL+KENKDTQEA+G+IGKMLG+Q RSFGFAGTKDKRS+STQ
Sbjct: 175  FDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQ 234

Query: 691  RVTIFKQHAKRLAALNSRLIGIKVGDFCYVKEGLVLGQLMGNRFTITLRGVVAESQDIVK 512
            RVT+FKQHA RLAALN RLIGIKVGDFC+V+EGLVLGQL+GNRFTITLRGVVA+S++ +K
Sbjct: 235  RVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIK 294

Query: 511  AAADGLSRNGFINYYGLQRFGSGSVPTHMIGAALLKGEWKHAVDLILNP 365
            A+AD L R GFINY+GLQRFGSGSVPTH+IGAALL+GEW+ AV LIL+P
Sbjct: 295  ASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDP 343



 Score =  120 bits (302), Expect(2) = e-155
 Identities = 60/76 (78%), Positives = 63/76 (82%)
 Frame = -1

Query: 287 DIDIALRQFPRHLVAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASE 108
           DI+  LRQFPRHLVAERA+LQCLKK PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS 
Sbjct: 363 DIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 422

Query: 107 RVQRHDAVLECLPSLV 60
           RVQ +      L  LV
Sbjct: 423 RVQNYGTKQVVLGDLV 438


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  456 bits (1172), Expect(2) = e-155
 Identities = 229/349 (65%), Positives = 270/349 (77%), Gaps = 2/349 (0%)
 Frame = -2

Query: 1405 KSLDEADVGILCYVSSLPGFRGVLKQRYSDFIVNEVDLDGKIIHLTSFDLPPEFSEEKAP 1226
            K L+E+DVGI  Y+S LPGFRG+LKQRY DFIVNEVD DG ++HLTS D PPE S EK  
Sbjct: 2    KHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPE-SMEKNE 60

Query: 1225 EKNPHSSDKDYSGEIEAFRSLSGEVDAESLRDFLEKIVDSEASDVAPIILSPDSDKSHRA 1046
             K    S+K Y+ EIE FRSL G+ D E L+  ++++       V+PI+LS  SDKSHR 
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 1045 EVHNFFKRNFKFLVTDTVEEADT--KCVRVRFCSXXXXXXXXXXXXXXXXXXXXXKNERP 872
             VHNFFK N KFLVTDT++  DT  KC+RVR  S                       ++P
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDR------RDKP 174

Query: 871  FDSRGSDNWPEHLGKFLRFHLFKENKDTQEALGVIGKMLGVQQRSFGFAGTKDKRSISTQ 692
            FDSRGSDNW EH+GKFLRFHL+KENKDTQEA+G+IGKMLG+Q RSFGFAGTKDKRS+STQ
Sbjct: 175  FDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQ 234

Query: 691  RVTIFKQHAKRLAALNSRLIGIKVGDFCYVKEGLVLGQLMGNRFTITLRGVVAESQDIVK 512
            RVT+FKQHA RLAALN RLIGIKVGDFC+V+EGLVLGQL+GNRFTITLRGVVA+S++ +K
Sbjct: 235  RVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIK 294

Query: 511  AAADGLSRNGFINYYGLQRFGSGSVPTHMIGAALLKGEWKHAVDLILNP 365
            A+AD L R GFINY+GLQRFGSGSVPTH+IGAALL+GEW+ AV LIL+P
Sbjct: 295  ASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDP 343



 Score =  120 bits (302), Expect(2) = e-155
 Identities = 60/76 (78%), Positives = 63/76 (82%)
 Frame = -1

Query: 287 DIDIALRQFPRHLVAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASE 108
           DI+  LRQFPRHLVAERA+LQCLKK PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS 
Sbjct: 362 DIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 421

Query: 107 RVQRHDAVLECLPSLV 60
           RVQ +      L  LV
Sbjct: 422 RVQNYGTKQVVLGDLV 437


>ref|NP_001146470.1| uncharacterized protein LOC100280058 [Zea mays]
            gi|219887425|gb|ACL54087.1| unknown [Zea mays]
            gi|413949796|gb|AFW82445.1| hypothetical protein
            ZEAMMB73_396305 [Zea mays]
          Length = 682

 Score =  450 bits (1158), Expect(2) = e-155
 Identities = 224/352 (63%), Positives = 271/352 (76%), Gaps = 6/352 (1%)
 Frame = -2

Query: 1402 SLDEADVGILCYVSSLPGFRGVLKQRYSDFIVNEVDLDGKIIHLTSFDLPPEFSEEKAPE 1223
            SL EA+ GI C+ SSLPGFRGVLK RY+DFIV+EV  DG ++ LTSFDLP E       +
Sbjct: 6    SLSEAEAGISCFASSLPGFRGVLKHRYADFIVHEVARDGALVQLTSFDLPTESVGVNEED 65

Query: 1222 KNPHSSDKDYSGEIEAFRSLSGEVDAESLRDFLEKIVDSEASDVAPIILSPDSDKSHRAE 1043
            K   S++ D+S  +E+FRSL G+ D  +LR  LEK+      DV+P+ILSPD+DK+HR+E
Sbjct: 66   KAAPSAEADHSQALESFRSLCGDADCNALRGLLEKVSGEGGGDVSPVILSPDADKAHRSE 125

Query: 1042 VHNFFKRNFKFLVTDTVEEAD--TKCVRVRFCSXXXXXXXXXXXXXXXXXXXXXKNE--- 878
            VHNFFK+ FKFLVTDTVE +D   KC+RVRF S                      ++   
Sbjct: 126  VHNFFKKTFKFLVTDTVEHSDGVQKCIRVRFGSEAGVGRGAGGRGRGRKRKNMGSSDWRD 185

Query: 877  -RPFDSRGSDNWPEHLGKFLRFHLFKENKDTQEALGVIGKMLGVQQRSFGFAGTKDKRSI 701
             RPFDSRGS NWP+++GKFLRFHL+KENKDTQEALGVIGKMLG+Q RSFGFAGTKDKR++
Sbjct: 186  GRPFDSRGSSNWPDNVGKFLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFAGTKDKRAV 245

Query: 700  STQRVTIFKQHAKRLAALNSRLIGIKVGDFCYVKEGLVLGQLMGNRFTITLRGVVAESQD 521
            +TQ+VT+FK  A +L ALN RL GIKVG+FCYVKEGLVLGQL GNRFTITLRGV AES+D
Sbjct: 246  TTQQVTVFKVQASKLLALNKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESED 305

Query: 520  IVKAAADGLSRNGFINYYGLQRFGSGSVPTHMIGAALLKGEWKHAVDLILNP 365
            ++K A DGL +NGFINYYGLQRFGSGS+PTH++GAALL+GEWK AV+LIL+P
Sbjct: 306  MIKIAVDGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDP 357



 Score =  125 bits (315), Expect(2) = e-155
 Identities = 57/66 (86%), Positives = 63/66 (95%)
 Frame = -1

Query: 290 GDIDIALRQFPRHLVAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS 111
           GDID+ALR FPRHLVAERA+LQCLKKCPGN+LQALK IPRTLRMMYVHSYQSYLWNHAAS
Sbjct: 376 GDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSYLWNHAAS 435

Query: 110 ERVQRH 93
            RV+++
Sbjct: 436 MRVEKY 441