BLASTX nr result

ID: Dioscorea21_contig00009482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009482
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447848.1| hypothetical protein SORBIDRAFT_06g016870 [S...    70   2e-10
tpg|DAA37769.1| TPA: putative thioredoxin superfamily protein [Z...    65   6e-09
dbj|BAJ86557.1| predicted protein [Hordeum vulgare subsp. vulgar...    64   1e-08
ref|XP_003579759.1| PREDICTED: thioredoxin M3, chloroplastic-lik...    63   2e-08
gb|ABC46707.1| chloroplast thioredoxin M-type [Arachis hypogaea]       58   9e-07

>ref|XP_002447848.1| hypothetical protein SORBIDRAFT_06g016870 [Sorghum bicolor]
           gi|241939031|gb|EES12176.1| hypothetical protein
           SORBIDRAFT_06g016870 [Sorghum bicolor]
          Length = 191

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 53/131 (40%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
 Frame = -1

Query: 339 AEAYPAPPC------LSCATLMAPEPSPFLSPARLPNRFFSCSRGLDGRGIRSIPSSYSP 178
           A A  APPC      L CA  +     PF S A  P+R         GR +    SSY+ 
Sbjct: 3   AAAVAAPPCPAPPRGLRCAKTV-----PFPSSAAAPSR---------GRVVYG--SSYAR 46

Query: 177 LLAWK-RRW-----------RRGSATSNFASNVCCALSGAPEVITASSWNTAILQSDAPV 34
              W+ RRW           RR +A    A  V CA S   E ITA SWN  ++ SD PV
Sbjct: 47  --RWQCRRWAHRPDAATTRIRRPTARRTAALRVTCAYSPGAERITACSWNEYVICSDVPV 104

Query: 33  LVEFWASWCGP 1
           L+EFWASWCGP
Sbjct: 105 LIEFWASWCGP 115


>tpg|DAA37769.1| TPA: putative thioredoxin superfamily protein [Zea mays]
          Length = 188

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/121 (38%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
 Frame = -1

Query: 327 PAPPCLSCATLMAPEPSPFLSPARLPNRFFSCSRGLDGRGIRSIPSSYSPLLAWK-RRW- 154
           PAPP +       P PS   S           SRG  G G     SSY+    W+ RRW 
Sbjct: 10  PAPPRVFRCAKTLPAPSAATS-----------SRGRVGYG-----SSYAR--RWQCRRWT 51

Query: 153 ----------RRGSATSNFASNVCCALSGAPEVITASSWNTAILQSDAPVLVEFWASWCG 4
                     RR +        V CA S   E ITA SWN  ++ SD PVL+EFWASWCG
Sbjct: 52  HRPDATTTRIRRATPRRTAVVRVNCAYSPRAETITACSWNEYVICSDVPVLIEFWASWCG 111

Query: 3   P 1
           P
Sbjct: 112 P 112


>dbj|BAJ86557.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326510531|dbj|BAJ87482.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 180

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
 Frame = -1

Query: 162 RRWRRGS---------ATSNFASNVCCALSGAPEVITASSWNTAILQSDAPVLVEFWASW 10
           RRW  G           T +  + V CA S   E ITA SWN  ++ SD PVLVEFWASW
Sbjct: 42  RRWAHGPDAASRIRRPTTGSSTARVSCAYSTGAEAITACSWNQNVICSDVPVLVEFWASW 101

Query: 9   CGP 1
           CGP
Sbjct: 102 CGP 104


>ref|XP_003579759.1| PREDICTED: thioredoxin M3, chloroplastic-like [Brachypodium
           distachyon]
          Length = 185

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
 Frame = -1

Query: 309 SCATLMAPEPSPFLSPARL-PNRFFSCSRGLDGRGIRSIPSSYSPLLAWKRRW-RRGSAT 136
           + A   AP  + F + A+L P+   + SR       R +  S S      RRW  R  A 
Sbjct: 4   AAAACSAPPRNLFCATAQLAPSAAAATSR-------RRVGCSISTRRWPCRRWAHRPDAA 56

Query: 135 SNF--------ASNVCCALSGAPEVITASSWNTAILQSDAPVLVEFWASWCGP 1
           S          A+ V CA S   E ITA SWN  ++ SD PVLVEFWASWCGP
Sbjct: 57  SRIRRTTPRPKAARVSCAYSTGAEAITACSWNQYVICSDVPVLVEFWASWCGP 109


>gb|ABC46707.1| chloroplast thioredoxin M-type [Arachis hypogaea]
          Length = 180

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = -1

Query: 315 CLSCATLMAPEPSPFLSPARLPNRF-FSCSRGLDGRGIRSIPSSYSPLLAWKRRWRRGSA 139
           CL  +T +       LSP     +  FS  RG +   + S  S+ +P L         + 
Sbjct: 6   CLRLSTTVGTARIQCLSPLSSWKKLVFSSYRGFNKSMLYSTVSNSNPSLY------STAG 59

Query: 138 TSNFASNVCCALSGAPEV--ITASSWNTAILQSDAPVLVEFWASWCGP 1
           TS  +S VC A     EV  +T SSWN  ++ S+ PVLVEFWA WCGP
Sbjct: 60  TSRKSSFVCNAREKVNEVQVVTDSSWNKLVIGSETPVLVEFWAPWCGP 107


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