BLASTX nr result

ID: Dioscorea21_contig00009444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009444
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315904.1| predicted protein [Populus trichocarpa] gi|2...   353   2e-95
ref|XP_003536657.1| PREDICTED: sec-independent protein transloca...   350   2e-94
ref|XP_003555930.1| PREDICTED: sec-independent protein transloca...   349   6e-94
gb|ACU19983.1| unknown [Glycine max]                                  347   3e-93
ref|XP_002468243.1| hypothetical protein SORBIDRAFT_01g042360 [S...   344   2e-92

>ref|XP_002315904.1| predicted protein [Populus trichocarpa] gi|222864944|gb|EEF02075.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  353 bits (907), Expect = 2e-95
 Identities = 172/201 (85%), Positives = 187/201 (93%)
 Frame = -3

Query: 605 PENLSKENDGSPIYNFLYPGKELLPDDKEMSIFDHLEELRERIFVSILAVGVAMLGCFAF 426
           P+N  ++++GSPIYNFLYP KELLPDDKEMS+FDHLEELRERIFVS+ AVG A++GCFAF
Sbjct: 20  PQNFGQDSEGSPIYNFLYPQKELLPDDKEMSLFDHLEELRERIFVSVFAVGAAIVGCFAF 79

Query: 425 SKELIVFLEAPVAVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLT 246
           SKEL++ LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLT
Sbjct: 80  SKELVILLEAPVKSQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLT 139

Query: 245 KDERRFLGPIVLGSSVLFYTGIAFSYAVLTPAALKFFVSYAEGAVESLWSIDQYFEFILV 66
           K ERRFLGPIVLGSSVLFY GI FSY +LTPAAL FFVSYAEGAVESLWSIDQYFEF+LV
Sbjct: 140 KSERRFLGPIVLGSSVLFYAGIIFSYLILTPAALNFFVSYAEGAVESLWSIDQYFEFVLV 199

Query: 65  LMFSTGLSFQVPVIQLLLGQV 3
           LMFSTGLSFQVPVIQ+LLGQV
Sbjct: 200 LMFSTGLSFQVPVIQILLGQV 220


>ref|XP_003536657.1| PREDICTED: sec-independent protein translocase protein TatC-like
           [Glycine max]
          Length = 346

 Score =  350 bits (899), Expect = 2e-94
 Identities = 176/222 (79%), Positives = 194/222 (87%), Gaps = 6/222 (2%)
 Frame = -3

Query: 650 GTFIEAKPDN------TLKETPENLSKENDGSPIYNFLYPGKELLPDDKEMSIFDHLEEL 489
           G+ +E +P+N      T +ET  N  ++ D   IY+FLYP KELLPDDKEMSIFDHLEEL
Sbjct: 67  GSALEERPENADLFESTAEETQGNFGQDGDRGAIYDFLYPDKELLPDDKEMSIFDHLEEL 126

Query: 488 RERIFVSILAVGVAMLGCFAFSKELIVFLEAPVAVQGVRFLQLSPGEFFFTTLKVSGYCG 309
           R+RIFVS+LAVG ++LGCFAFSKELI+ LEAPV  QGVRFLQL+PGEFFFTTLKVSGYCG
Sbjct: 127 RQRIFVSVLAVGASILGCFAFSKELIMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCG 186

Query: 308 LLLGSPVILYEIIAFVLPGLTKDERRFLGPIVLGSSVLFYTGIAFSYAVLTPAALKFFVS 129
           LLLGSPVILYE+IAFVLPGLTK ERRFLGPIVLGSSVLFY GI FSY VLTPAAL FFV+
Sbjct: 187 LLLGSPVILYEVIAFVLPGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVT 246

Query: 128 YAEGAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLLLGQV 3
           YAEGAVESLWSIDQYFEF+LVLMFSTGLSFQVPVIQ LLGQ+
Sbjct: 247 YAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 288


>ref|XP_003555930.1| PREDICTED: sec-independent protein translocase protein TatC-like
           [Glycine max]
          Length = 344

 Score =  349 bits (895), Expect = 6e-94
 Identities = 177/222 (79%), Positives = 193/222 (86%), Gaps = 6/222 (2%)
 Frame = -3

Query: 650 GTFIEAKPDNT------LKETPENLSKENDGSPIYNFLYPGKELLPDDKEMSIFDHLEEL 489
           G+ +E +P NT       +ET  N  ++ +  PIYNFLYP KELLPDDKEMSIFDHLEEL
Sbjct: 65  GSALEERPGNTDLFESTTEETQGNFRQDGEPGPIYNFLYPDKELLPDDKEMSIFDHLEEL 124

Query: 488 RERIFVSILAVGVAMLGCFAFSKELIVFLEAPVAVQGVRFLQLSPGEFFFTTLKVSGYCG 309
           R+RIFVS+LAVG ++LGCFAFSKELI+ LEAPV  QGVRFLQL+PGEFFFTTLKVSGYCG
Sbjct: 125 RQRIFVSVLAVGASILGCFAFSKELIMILEAPVKSQGVRFLQLAPGEFFFTTLKVSGYCG 184

Query: 308 LLLGSPVILYEIIAFVLPGLTKDERRFLGPIVLGSSVLFYTGIAFSYAVLTPAALKFFVS 129
           LLLG PVILYEIIAFVLPGLTK ERRFLGPIVLGSSVLFY GI FSY VLTPAAL FFV+
Sbjct: 185 LLLGIPVILYEIIAFVLPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVT 244

Query: 128 YAEGAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLLLGQV 3
           YAEGAVESLWSIDQYFEF+LVLMFSTGLSFQVPVIQ LLGQ+
Sbjct: 245 YAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 286


>gb|ACU19983.1| unknown [Glycine max]
          Length = 343

 Score =  347 bits (889), Expect = 3e-93
 Identities = 174/219 (79%), Positives = 192/219 (87%), Gaps = 3/219 (1%)
 Frame = -3

Query: 650 GTFIEAKPD---NTLKETPENLSKENDGSPIYNFLYPGKELLPDDKEMSIFDHLEELRER 480
           G+ +E +PD   +T  ET  N  ++ D   IY+FLYP KE LPDDKEMSIFDHLEELR+R
Sbjct: 67  GSALEERPDLFESTAVETQGNFGQDGDRGAIYDFLYPDKEFLPDDKEMSIFDHLEELRQR 126

Query: 479 IFVSILAVGVAMLGCFAFSKELIVFLEAPVAVQGVRFLQLSPGEFFFTTLKVSGYCGLLL 300
           IFVS+LAVG ++LGCFAFSKELI+ LEAPV  QGVRFLQL+PGEFFFTTLKVSG+CGLLL
Sbjct: 127 IFVSVLAVGASILGCFAFSKELIMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGHCGLLL 186

Query: 299 GSPVILYEIIAFVLPGLTKDERRFLGPIVLGSSVLFYTGIAFSYAVLTPAALKFFVSYAE 120
           GSPVILYE+IAFVLPGLTK ERRFLGPIVLGSSVLFY GI FSY VLTPAAL FFV+YAE
Sbjct: 187 GSPVILYEVIAFVLPGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAE 246

Query: 119 GAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLLLGQV 3
           GAVESLWSIDQYFEF+LVLMFSTGLSFQVPVIQ LLGQ+
Sbjct: 247 GAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 285


>ref|XP_002468243.1| hypothetical protein SORBIDRAFT_01g042360 [Sorghum bicolor]
           gi|241922097|gb|EER95241.1| hypothetical protein
           SORBIDRAFT_01g042360 [Sorghum bicolor]
          Length = 352

 Score =  344 bits (882), Expect = 2e-92
 Identities = 168/195 (86%), Positives = 185/195 (94%)
 Frame = -3

Query: 587 ENDGSPIYNFLYPGKELLPDDKEMSIFDHLEELRERIFVSILAVGVAMLGCFAFSKELIV 408
           E + S +YNFLYP K+LLPDDKEMSIFDHLEELRERIF+S+LAVG A+LGCFAFSK+L++
Sbjct: 100 EEEQSALYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAFSKDLVL 159

Query: 407 FLEAPVAVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTKDERRF 228
           FLEAPV VQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLT+DER+F
Sbjct: 160 FLEAPVTVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKF 219

Query: 227 LGPIVLGSSVLFYTGIAFSYAVLTPAALKFFVSYAEGAVESLWSIDQYFEFILVLMFSTG 48
           LGPIVLGSSVLFY GI FSY VL+PAAL FFV+YA+GAVESLWSIDQYFEFILVLMFSTG
Sbjct: 220 LGPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTG 279

Query: 47  LSFQVPVIQLLLGQV 3
           LSFQVPVIQLLLGQ+
Sbjct: 280 LSFQVPVIQLLLGQL 294


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