BLASTX nr result

ID: Dioscorea21_contig00009429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009429
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437125.1| hypothetical protein SORBIDRAFT_10g021600 [S...    60   1e-07
ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Br...    59   4e-07
gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]                     58   7e-07
ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG3...    58   7e-07
emb|CBI21998.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002437125.1| hypothetical protein SORBIDRAFT_10g021600 [Sorghum bicolor]
           gi|241915348|gb|EER88492.1| hypothetical protein
           SORBIDRAFT_10g021600 [Sorghum bicolor]
          Length = 192

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -3

Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289
           GYVK FTLSSTMGPGFPV+I SLSVAAD+Y K+QV
Sbjct: 157 GYVKKFTLSSTMGPGFPVTIPSLSVAADHYNKVQV 191


>ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Brachypodium distachyon]
          Length = 405

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -3

Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289
           GYVK FTLSSTMGPGFPV+I SLS AAD+Y K+QV
Sbjct: 370 GYVKKFTLSSTMGPGFPVTIPSLSAAADHYNKVQV 404


>gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]
          Length = 409

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -3

Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289
           GYVK FTLSSTMGPG PV+I SLSVAAD+Y K+QV
Sbjct: 374 GYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408


>ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG34349.1| 50S ribosomal
           protein L1 [Zea mays]
          Length = 409

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -3

Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289
           GYVK FTLSSTMGPG PV+I SLSVAAD+Y K+QV
Sbjct: 374 GYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408


>emb|CBI21998.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = -3

Query: 396 AGYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQVK 286
           AGYV  F L STMGPGFPVSIQSLS+AAD+Y KL  +
Sbjct: 238 AGYVNAFHLCSTMGPGFPVSIQSLSMAADHYNKLHAQ 274


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