BLASTX nr result
ID: Dioscorea21_contig00009429
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00009429 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002437125.1| hypothetical protein SORBIDRAFT_10g021600 [S... 60 1e-07 ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Br... 59 4e-07 gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays] 58 7e-07 ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG3... 58 7e-07 emb|CBI21998.3| unnamed protein product [Vitis vinifera] 55 6e-06 >ref|XP_002437125.1| hypothetical protein SORBIDRAFT_10g021600 [Sorghum bicolor] gi|241915348|gb|EER88492.1| hypothetical protein SORBIDRAFT_10g021600 [Sorghum bicolor] Length = 192 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/35 (82%), Positives = 32/35 (91%) Frame = -3 Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289 GYVK FTLSSTMGPGFPV+I SLSVAAD+Y K+QV Sbjct: 157 GYVKKFTLSSTMGPGFPVTIPSLSVAADHYNKVQV 191 >ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Brachypodium distachyon] Length = 405 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/35 (80%), Positives = 31/35 (88%) Frame = -3 Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289 GYVK FTLSSTMGPGFPV+I SLS AAD+Y K+QV Sbjct: 370 GYVKKFTLSSTMGPGFPVTIPSLSAAADHYNKVQV 404 >gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays] Length = 409 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/35 (80%), Positives = 31/35 (88%) Frame = -3 Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289 GYVK FTLSSTMGPG PV+I SLSVAAD+Y K+QV Sbjct: 374 GYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408 >ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG34349.1| 50S ribosomal protein L1 [Zea mays] Length = 409 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/35 (80%), Positives = 31/35 (88%) Frame = -3 Query: 393 GYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQV 289 GYVK FTLSSTMGPG PV+I SLSVAAD+Y K+QV Sbjct: 374 GYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408 >emb|CBI21998.3| unnamed protein product [Vitis vinifera] Length = 274 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/37 (72%), Positives = 30/37 (81%) Frame = -3 Query: 396 AGYVKNFTLSSTMGPGFPVSIQSLSVAADNYVKLQVK 286 AGYV F L STMGPGFPVSIQSLS+AAD+Y KL + Sbjct: 238 AGYVNAFHLCSTMGPGFPVSIQSLSMAADHYNKLHAQ 274