BLASTX nr result

ID: Dioscorea21_contig00009413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009413
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001065202.1| Os10g0544600 [Oryza sativa Japonica Group] g...   293   7e-77
gb|EEE51341.1| hypothetical protein OsJ_32340 [Oryza sativa Japo...   293   7e-77
ref|XP_002467562.1| hypothetical protein SORBIDRAFT_01g030190 [S...   287   3e-75
ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|2...   284   3e-74
ref|NP_195309.2| NEP1-interacting protein 1 [Arabidopsis thalian...   282   1e-73

>ref|NP_001065202.1| Os10g0544600 [Oryza sativa Japonica Group]
           gi|13357247|gb|AAK20044.1|AC025783_4 hypothetical
           protein [Oryza sativa Japonica Group]
           gi|31433346|gb|AAP54875.1| Zinc finger, C3HC4 type
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113639811|dbj|BAF27116.1| Os10g0544600 [Oryza sativa
           Japonica Group] gi|215692678|dbj|BAG88098.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740757|dbj|BAG97413.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767394|dbj|BAG99622.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218184958|gb|EEC67385.1| hypothetical protein
           OsI_34527 [Oryza sativa Indica Group]
          Length = 233

 Score =  293 bits (749), Expect = 7e-77
 Identities = 137/196 (69%), Positives = 163/196 (83%)
 Frame = -1

Query: 905 RFLCAVVTCVFALVGSFVGAVTGALIGLATESGLFRGAGIGAISGAVFSIEVVESSLALW 726
           R LCAV TCVFA VGS VGAVTG+ IGLATESG+ RGAGIGAISGAVFSIEV ESS  LW
Sbjct: 37  RVLCAVATCVFAAVGSVVGAVTGSAIGLATESGMLRGAGIGAISGAVFSIEVAESSRDLW 96

Query: 725 HSNESGIWSILYVIDIITSLLSGRLVREKVGPAVQSAVQSQMNAVDLPFAEAIDLFETGG 546
           HS++S +W ++Y++DII+SLLSGRLVREKVGPAVQSAVQSQ++A+  PFAE  DLFETGG
Sbjct: 97  HSSDSAVWCLVYMVDIISSLLSGRLVREKVGPAVQSAVQSQISAISSPFAETSDLFETGG 156

Query: 545 TKGMSKDSVDKIQKISVTAENNVDDSGEKICCSVCLQDLQIGETVRSLPHCEHMFHLLCI 366
           TKG+  D++ ++  I +T +N VD +GE ICCSVCLQD ++GE  R LP C H+FH+ CI
Sbjct: 157 TKGLPADTLRRLPAIKITGDNAVDSAGEPICCSVCLQDFRVGEMARRLPSCRHVFHVPCI 216

Query: 365 DSWLIRHGSCPLCRRD 318
           D WL+RHGSCPLCRRD
Sbjct: 217 DCWLVRHGSCPLCRRD 232


>gb|EEE51341.1| hypothetical protein OsJ_32340 [Oryza sativa Japonica Group]
          Length = 309

 Score =  293 bits (749), Expect = 7e-77
 Identities = 137/196 (69%), Positives = 163/196 (83%)
 Frame = -1

Query: 905 RFLCAVVTCVFALVGSFVGAVTGALIGLATESGLFRGAGIGAISGAVFSIEVVESSLALW 726
           R LCAV TCVFA VGS VGAVTG+ IGLATESG+ RGAGIGAISGAVFSIEV ESS  LW
Sbjct: 113 RVLCAVATCVFAAVGSVVGAVTGSAIGLATESGMLRGAGIGAISGAVFSIEVAESSRDLW 172

Query: 725 HSNESGIWSILYVIDIITSLLSGRLVREKVGPAVQSAVQSQMNAVDLPFAEAIDLFETGG 546
           HS++S +W ++Y++DII+SLLSGRLVREKVGPAVQSAVQSQ++A+  PFAE  DLFETGG
Sbjct: 173 HSSDSAVWCLVYMVDIISSLLSGRLVREKVGPAVQSAVQSQISAISSPFAETSDLFETGG 232

Query: 545 TKGMSKDSVDKIQKISVTAENNVDDSGEKICCSVCLQDLQIGETVRSLPHCEHMFHLLCI 366
           TKG+  D++ ++  I +T +N VD +GE ICCSVCLQD ++GE  R LP C H+FH+ CI
Sbjct: 233 TKGLPADTLRRLPAIKITGDNAVDSAGEPICCSVCLQDFRVGEMARRLPSCRHVFHVPCI 292

Query: 365 DSWLIRHGSCPLCRRD 318
           D WL+RHGSCPLCRRD
Sbjct: 293 DCWLVRHGSCPLCRRD 308


>ref|XP_002467562.1| hypothetical protein SORBIDRAFT_01g030190 [Sorghum bicolor]
           gi|241921416|gb|EER94560.1| hypothetical protein
           SORBIDRAFT_01g030190 [Sorghum bicolor]
          Length = 226

 Score =  287 bits (735), Expect = 3e-75
 Identities = 133/199 (66%), Positives = 163/199 (81%)
 Frame = -1

Query: 914 LLGRFLCAVVTCVFALVGSFVGAVTGALIGLATESGLFRGAGIGAISGAVFSIEVVESSL 735
           L GR LCAV TCVFA VGS VGAVTG+++GLATESG+ RGAGIGAISGAVFSIEV ESS 
Sbjct: 27  LAGRVLCAVATCVFAAVGSLVGAVTGSMVGLATESGMLRGAGIGAISGAVFSIEVAESSR 86

Query: 734 ALWHSNESGIWSILYVIDIITSLLSGRLVREKVGPAVQSAVQSQMNAVDLPFAEAIDLFE 555
            LWHS +SG+WS+LY++DII+ LLSGRLVREKVGPAVQSAVQSQ++A+  PF E  DLFE
Sbjct: 87  DLWHSADSGVWSLLYMVDIISGLLSGRLVREKVGPAVQSAVQSQISAISSPFEETSDLFE 146

Query: 554 TGGTKGMSKDSVDKIQKISVTAENNVDDSGEKICCSVCLQDLQIGETVRSLPHCEHMFHL 375
           TG  +G+ +D+V ++ +  + A+  VD +G+ +CCSVCLQD ++GE  R LP C H+FH+
Sbjct: 147 TGSVRGLPEDAVRRLPETVIAADTAVDAAGQALCCSVCLQDFRVGEPARRLPGCRHLFHV 206

Query: 374 LCIDSWLIRHGSCPLCRRD 318
            CID WL+RHGSCPLCRRD
Sbjct: 207 PCIDCWLVRHGSCPLCRRD 225


>ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|222836721|gb|EEE75114.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  284 bits (726), Expect = 3e-74
 Identities = 136/202 (67%), Positives = 164/202 (81%)
 Frame = -1

Query: 923 VSHLLGRFLCAVVTCVFALVGSFVGAVTGALIGLATESGLFRGAGIGAISGAVFSIEVVE 744
           VS ++G    A+ T  FALVG+ +GA+TGALIG  TESG  RGA +GAISGAVFSIEV E
Sbjct: 22  VSAIIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFE 81

Query: 743 SSLALWHSNESGIWSILYVIDIITSLLSGRLVREKVGPAVQSAVQSQMNAVDLPFAEAID 564
           SSL LW S+ESGI  +LY+ID+I SLLSGRLVRE++GPA+ SAVQSQM AV+  F E  +
Sbjct: 82  SSLVLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFEEIPN 141

Query: 563 LFETGGTKGMSKDSVDKIQKISVTAENNVDDSGEKICCSVCLQDLQIGETVRSLPHCEHM 384
           +F+TGG+KG+  DS++KI KI +T+ NNVD+SGEK+ CSVCLQD Q+GETVRSLPHC HM
Sbjct: 142 IFDTGGSKGLPGDSLEKIPKIRITSNNNVDESGEKVSCSVCLQDFQLGETVRSLPHCHHM 201

Query: 383 FHLLCIDSWLIRHGSCPLCRRD 318
           FHL CID WL+RH SCPLCRRD
Sbjct: 202 FHLPCIDKWLLRHASCPLCRRD 223


>ref|NP_195309.2| NEP1-interacting protein 1 [Arabidopsis thaliana]
           gi|68565196|sp|Q8GT75.2|NIP1_ARATH RecName:
           Full=NEP1-interacting protein 1; AltName: Full=RING-H2
           finger protein ATL26 gi|26451101|dbj|BAC42655.1| unknown
           protein [Arabidopsis thaliana]
           gi|30017273|gb|AAP12870.1| At4g35840 [Arabidopsis
           thaliana] gi|332661179|gb|AEE86579.1| NEP1-interacting
           protein 1 [Arabidopsis thaliana]
          Length = 236

 Score =  282 bits (721), Expect = 1e-73
 Identities = 138/205 (67%), Positives = 163/205 (79%)
 Frame = -1

Query: 932 RSTVSHLLGRFLCAVVTCVFALVGSFVGAVTGALIGLATESGLFRGAGIGAISGAVFSIE 753
           R T+S +LG  L AV+T  FALVG+ +GA+TGALIG  TESG  RGA +GAISGAVFSIE
Sbjct: 31  RFTLSAVLGTILSAVLTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIE 90

Query: 752 VVESSLALWHSNESGIWSILYVIDIITSLLSGRLVREKVGPAVQSAVQSQMNAVDLPFAE 573
           V ESSL LW SNES    +LY+ID+I SL+SGRLVRE++GPA+ SAVQSQM AVD  F E
Sbjct: 91  VFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQMGAVDSTFEE 150

Query: 572 AIDLFETGGTKGMSKDSVDKIQKISVTAENNVDDSGEKICCSVCLQDLQIGETVRSLPHC 393
              +F+TGG+KG++ D VDKI KI +T +NN+D SG K  CSVCLQD Q+GETVRSLPHC
Sbjct: 151 LSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHC 210

Query: 392 EHMFHLLCIDSWLIRHGSCPLCRRD 318
            HMFHL CID+WL RHGSCP+CRRD
Sbjct: 211 HHMFHLPCIDNWLFRHGSCPMCRRD 235


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