BLASTX nr result

ID: Dioscorea21_contig00009389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009389
         (1849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]   496   e-138
ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...   494   e-137
ref|XP_002298618.1| f-box family protein [Populus trichocarpa] g...   461   e-127
ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus ...   448   e-123
ref|XP_002328886.1| f-box family protein [Populus trichocarpa] g...   437   e-120

>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score =  496 bits (1277), Expect = e-138
 Identities = 236/364 (64%), Positives = 293/364 (80%), Gaps = 2/364 (0%)
 Frame = +2

Query: 563  GSSKVMEPQDADYSYVPLLSDEIALLILARVPRSEYQRLCYVNRRYQTLVRSGELYSIRK 742
            GSS  ++ QDADYS  P LS E+  LILARVPRSEY + C+VN+RY TL++SGEL+ IR+
Sbjct: 152  GSSSAVDTQDADYSDGPSLSYEVEGLILARVPRSEYWKFCFVNKRYLTLLKSGELFKIRR 211

Query: 743  EIGIKEPSILMLASGESNWWCYDPRSRVRRNLPVLPADECFSSFDKESLCAGTHLLVSGK 922
            EIG+KE S+ MLASGE++WW +D +   RR LP+LP+D CF+S DKES+CAGTHL+VSG+
Sbjct: 212  EIGVKESSVFMLASGETSWWAFDRQFEYRRRLPILPSDPCFTSADKESVCAGTHLIVSGR 271

Query: 923  EISGSVIWRYELASDQWFKGPLMINPRCLFASANCGNEACVAGGIA--PTMEILNTAEKY 1096
            E  G VIWRYELA ++WFKGP M+NPRC+FASANCG  ACVAGGI+   T E+LN+AE Y
Sbjct: 272  EFEGVVIWRYELAMNKWFKGPSMLNPRCMFASANCGXFACVAGGISMVSTKEVLNSAEIY 331

Query: 1097 DPESKTWNQLPRMKQRRKLCSGCYMDKKFYVIGGQNEKGDNLTCGEFYDAEKNVWELIPD 1276
            +P++K+W+ LPRM +RRK CSGCYMD KFYVIGGQ+EKG+ LTCGE YD ++  W+LIPD
Sbjct: 332  NPDNKSWDTLPRMNKRRKHCSGCYMDNKFYVIGGQDEKGEGLTCGEAYDEDRKAWDLIPD 391

Query: 1277 MLQKDAPTWSSRSPPLIAVVNNELYSLEASSNRLKVYLKKSNCWKDLGEVPVRADHSRGW 1456
            ML KDAP  +S SPPL+AVVNN+LYSLEASSN LKVYLKK+N W+ LG VPVRAD +RGW
Sbjct: 392  ML-KDAPVSTSESPPLVAVVNNDLYSLEASSNELKVYLKKTNSWRRLGTVPVRADFNRGW 450

Query: 1457 GVAFKSLGDELLVIGSRALTHAFRGMTICTCKPDPELDFPRWRVLENDGLHWSSFIFNCS 1636
            GVAFKSLG+ELLVIG+ +++ A  GMTI TC PDP+ +   W+ L++     S FI NCS
Sbjct: 451  GVAFKSLGNELLVIGASSVSFAGHGMTIYTCXPDPDAEELLWKPLDSGRNRLSHFILNCS 510

Query: 1637 IMVA 1648
            IM+A
Sbjct: 511  IMIA 514


>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis vinifera]
          Length = 437

 Score =  494 bits (1273), Expect = e-137
 Identities = 236/364 (64%), Positives = 293/364 (80%), Gaps = 2/364 (0%)
 Frame = +2

Query: 563  GSSKVMEPQDADYSYVPLLSDEIALLILARVPRSEYQRLCYVNRRYQTLVRSGELYSIRK 742
            GSS  ++ QDADYS  P LS E+  LILARVPRSEY + C+VN+RY TL++SGEL+ IR+
Sbjct: 75   GSSSAVDTQDADYSDGPSLSYEVEGLILARVPRSEYWKFCFVNKRYLTLLKSGELFKIRR 134

Query: 743  EIGIKEPSILMLASGESNWWCYDPRSRVRRNLPVLPADECFSSFDKESLCAGTHLLVSGK 922
            EIG+KE S+ MLASGE++WW +D +   RR LP+LP+D CF+S DKES+CAGTHL+VSG+
Sbjct: 135  EIGVKESSVFMLASGETSWWAFDRQFESRRRLPILPSDPCFTSADKESVCAGTHLIVSGR 194

Query: 923  EISGSVIWRYELASDQWFKGPLMINPRCLFASANCGNEACVAGGIA--PTMEILNTAEKY 1096
            E  G VIWRYELA ++WFKGP M+NPRC+FASANCG  ACVAGGI+   T E+LN+AE Y
Sbjct: 195  EFEGVVIWRYELAMNKWFKGPSMLNPRCMFASANCGAFACVAGGISMVSTKEVLNSAEIY 254

Query: 1097 DPESKTWNQLPRMKQRRKLCSGCYMDKKFYVIGGQNEKGDNLTCGEFYDAEKNVWELIPD 1276
            +P++K+W+ LPRM +RRK CSGCYMD KFYVIGGQ+EKG+ LTCGE YD ++  W+LIPD
Sbjct: 255  NPDNKSWDTLPRMNKRRKHCSGCYMDNKFYVIGGQDEKGEGLTCGEAYDEDRKAWDLIPD 314

Query: 1277 MLQKDAPTWSSRSPPLIAVVNNELYSLEASSNRLKVYLKKSNCWKDLGEVPVRADHSRGW 1456
            ML KDAP  +S SPPL+AVVNN+LYSLEASSN LKVYLKK+N W+ LG VPVRAD +RGW
Sbjct: 315  ML-KDAPVSTSESPPLVAVVNNDLYSLEASSNELKVYLKKTNSWRRLGTVPVRADFNRGW 373

Query: 1457 GVAFKSLGDELLVIGSRALTHAFRGMTICTCKPDPELDFPRWRVLENDGLHWSSFIFNCS 1636
            GVAFKSLG+ELLVIG+ +++ A  GMTI TC PDP+ +   W+ L++     S FI NCS
Sbjct: 374  GVAFKSLGNELLVIGASSVSFAGHGMTIYTCCPDPDAEELLWKPLDSGRNRLSHFILNCS 433

Query: 1637 IMVA 1648
            IM+A
Sbjct: 434  IMIA 437


>ref|XP_002298618.1| f-box family protein [Populus trichocarpa]
            gi|222845876|gb|EEE83423.1| f-box family protein [Populus
            trichocarpa]
          Length = 390

 Score =  461 bits (1187), Expect = e-127
 Identities = 234/400 (58%), Positives = 293/400 (73%), Gaps = 3/400 (0%)
 Frame = +2

Query: 458  KKINADELSNKKEIEVLNNSPKYGLSTDRGRNRANGSSKVMEPQDADYSYVPLLSDEIAL 637
            KKI   E+S          S  Y      GR    G S  ++PQD DYSY P LSDE+  
Sbjct: 2    KKIGVCEISR-------GGSGCYNFFCSNGRV---GDSSNVKPQDTDYSYAPQLSDELEN 51

Query: 638  LILARVPRSEYQRLCYVNRRYQTLVRSGELYSIRKEIGIKEPSILMLASGESNWWCYDPR 817
            LILARVPRSEY +   VN+R  +LV+SGEL+ IR+EIG++E S+ + A+G+ +WW +D +
Sbjct: 52   LILARVPRSEYWKFPNVNKRILSLVKSGELFKIRREIGVRESSVFIFATGDKSWWAFDRQ 111

Query: 818  SRVRRNLPVLPADECFSSFDKESLCAGTHLLVSGKEISGSVIWRYELASDQWFKGPLMIN 997
               RR LP LPAD CFS  DKESLCAGTHL++SG+EI G V+WRYEL ++ W KGP MIN
Sbjct: 112  FCSRRKLPDLPADCCFSFGDKESLCAGTHLIISGREIEGVVVWRYELETNSWNKGPSMIN 171

Query: 998  PRCLFASANCGNEACVAGGIAPT-MEILNTAEKYDPESKTWNQLPRMKQRRKLCSGCYMD 1174
            PRCLFASA+CG  A VAGG+  T +++LN+AEKY+P++K+W  LPRM+QRRKLCSGC+MD
Sbjct: 172  PRCLFASASCGAFAFVAGGVTGTGVDVLNSAEKYNPDTKSWEDLPRMRQRRKLCSGCFMD 231

Query: 1175 KKFYVIGGQNEKGDNLTCGEFYDAEKNVWELIPDMLQKDAPTWSSRSPPLIAVVNNELYS 1354
             KFYVIGG+NE+G+ LTC E YD +K  W+LIPDML+ D P  + +SPPLIAVVNNELY+
Sbjct: 232  NKFYVIGGRNEEGNVLTCAEAYDEDKKAWDLIPDMLE-DTPIATFQSPPLIAVVNNELYA 290

Query: 1355 LEASSNRLKVYLKKSNCWKDLGEVPVRADHSRGWGVAFKSLGDELLVIGSRALTHAFR-- 1528
            LE SSN+LKVYLK+S  WK LG VPVRAD ++GWGVAFKSLG+ELLVIG+   T ++   
Sbjct: 291  LEPSSNQLKVYLKRSRTWKKLGAVPVRADSNKGWGVAFKSLGNELLVIGASTSTVSYSGD 350

Query: 1529 GMTICTCKPDPELDFPRWRVLENDGLHWSSFIFNCSIMVA 1648
            GM I TC+PD E +  +WR LE      S+FI NCS+MVA
Sbjct: 351  GMAIYTCRPDSEAEELQWRPLECGKNRLSNFILNCSVMVA 390


>ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223549425|gb|EEF50913.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 483

 Score =  448 bits (1153), Expect = e-123
 Identities = 223/396 (56%), Positives = 285/396 (71%), Gaps = 3/396 (0%)
 Frame = +2

Query: 470  ADELSNKKEIEVLNNSPKYGLSTDRGRNRANGSSKVMEPQDADYSYVPLLSDEIALLILA 649
            + E ++  E   +    +Y  ST  GR    G S  ++PQDADY   P LSDE+   ILA
Sbjct: 92   SSETASTCETNTIKGLSRYAFSTSDGRV---GDSSSVQPQDADYFEYPQLSDEVENQILA 148

Query: 650  RVPRSEYQRLCYVNRRYQTLVRSGELYSIRKEIGIKEPSILMLASGESNWWCYDPRSRVR 829
            RVPRSEY +   VN+R   LV+SGEL+ IR+E+G++E S+ M  +G+S WW +D +   R
Sbjct: 149  RVPRSEYWKFPLVNKRIYALVKSGELFKIRRELGVRESSVFMFTTGDSGWWAFDRQFSCR 208

Query: 830  RNLPVLPADECFSSFDKESLCAGTHLLVSGKEISGSVIWRYELASDQWFKGPLMINPRCL 1009
            R LP LPAD CFSS DKE++CAGTHL++SG+EI+G V+WRYEL +++W KGP MI PRCL
Sbjct: 209  RKLPDLPADPCFSSGDKETVCAGTHLIISGREINGVVVWRYELETNRWRKGPSMIKPRCL 268

Query: 1010 FASANCGNEACVAGGIAPTMEILNTAEKYDPESKTWNQLPRMKQRRKLCSGCYMDKKFYV 1189
            FASA+CG  A VAGG+     +LN+AEKY+P++++W  LPRM+++R+L SGCYMD KFYV
Sbjct: 269  FASASCGLFAFVAGGVTEAGAVLNSAEKYNPDTRSWETLPRMQRKRRLSSGCYMDNKFYV 328

Query: 1190 IGGQNEKGDNLTCGEFYDAEKNVWELIPDMLQKDAPTWSSRSPPLIAVVNNELYSLEASS 1369
            IGG+NE+G  LTCGE YD +K  WELIPDML+ D P  + +SPPL+AVVNNELYSLE SS
Sbjct: 329  IGGRNEEGRCLTCGEAYDEDKKTWELIPDMLE-DTPVATYQSPPLVAVVNNELYSLETSS 387

Query: 1370 NRLKVYLKKSNCWKDLGEVPVRADHSRGWGVAFKSLGDELLVIGSRA--LTHAFRGMTIC 1543
            N LKVY K+S  W+ LG VPVRAD SRGWGVAFKSLG+ELLVIG+    ++++  GM I 
Sbjct: 388  NELKVYSKRSKTWRKLGPVPVRADSSRGWGVAFKSLGNELLVIGASTSIVSYSGDGMAIY 447

Query: 1544 TCKPDPELDFP-RWRVLENDGLHWSSFIFNCSIMVA 1648
            TC PD + D    W  LE      S+FI NCS+MVA
Sbjct: 448  TCCPDDKTDHALHWTPLECGRNRLSNFILNCSVMVA 483


>ref|XP_002328886.1| f-box family protein [Populus trichocarpa]
            gi|222839316|gb|EEE77653.1| f-box family protein [Populus
            trichocarpa]
          Length = 389

 Score =  437 bits (1125), Expect = e-120
 Identities = 219/368 (59%), Positives = 270/368 (73%), Gaps = 2/368 (0%)
 Frame = +2

Query: 551  NRANGSSKVMEPQDADYSYVPLLSDEIALLILARVPRSEYQRLCYVNRRYQTLVRSGELY 730
            +R  G S  +EPQDADYSYVP L DE+   ILARVPRSEY +   VN+R  +LV+SGEL 
Sbjct: 23   DRRAGDSSSVEPQDADYSYVPQLCDELENQILARVPRSEYWKFRIVNKRILSLVKSGELL 82

Query: 731  SIRKEIGIKEPSILMLASGESNWWCYDPRSRVRRNLPVLPADECFSSFDKESLCAGTHLL 910
            +IR+EIG +E  + + A+G+ +WW +D +   RR LP +PAD CFS  DKES+CAGTHL+
Sbjct: 83   NIRREIGFRESLVFIFATGDKSWWAFDQQFSSRRKLPDIPADCCFSFGDKESICAGTHLI 142

Query: 911  VSGKEISGSVIWRYELASDQWFKGPLMINPRCLFASANCGNEACVAGGIAPTMEILNTAE 1090
            +SG+EI G V+WRYEL ++ W KGP MINPRCLFASA+CG  A VAGG+  T   LN+AE
Sbjct: 143  ISGREIEGVVVWRYELETNSWNKGPSMINPRCLFASASCGAFAFVAGGVTGTGFDLNSAE 202

Query: 1091 KYDPESKTWNQLPRMKQRRKLCSGCYMDKKFYVIGGQNEKGDNLTCGEFYDAEKNVWELI 1270
            KY+P++K+W  LPRM  +RKLCSGC+MD KFYVIGG+NE+G  LT  E YD +K  W+LI
Sbjct: 203  KYNPDTKSWEDLPRMWHKRKLCSGCFMDNKFYVIGGRNEEGKVLTSAEVYDEDKKAWDLI 262

Query: 1271 PDMLQKDAPTWSSRSPPLIAVVNNELYSLEASSNRLKVYLKKSNCWKDLGEVPVRADHSR 1450
            PDML+ D    + +SPPLIAVVNN LYSLE SSN+L VYLKKS  WK LG VPVRAD + 
Sbjct: 263  PDMLE-DTTIATFQSPPLIAVVNNALYSLEPSSNQLMVYLKKSKTWKKLGPVPVRADSNT 321

Query: 1451 GWGVAFKSLGDELLVIGSRALTHAFR--GMTICTCKPDPELDFPRWRVLENDGLHWSSFI 1624
            GWGVAFKSLG+ELLVIG+   T ++   GM I TC+P  E +   WR LE      S+FI
Sbjct: 322  GWGVAFKSLGNELLVIGASTSTVSYSGDGMAIYTCRPGSEAEELLWRPLECGKNRLSNFI 381

Query: 1625 FNCSIMVA 1648
             NCS+MVA
Sbjct: 382  LNCSVMVA 389


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