BLASTX nr result
ID: Dioscorea21_contig00009369
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00009369
(1118 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japo... 361 2e-97
gb|EEC80778.1| hypothetical protein OsI_23301 [Oryza sativa Indi... 359 8e-97
ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG3... 355 1e-95
ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Br... 354 2e-95
gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays] 353 4e-95
>gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japonica Group]
Length = 417
Score = 361 bits (926), Expect = 2e-97
Identities = 213/369 (57%), Positives = 244/369 (66%), Gaps = 15/369 (4%)
Frame = +3
Query: 57 MARLELLFSHGRRHLSAPKLPFLGFLRFFSSDSS--------TVIKPVSYAVKPQESSSS 212
MA L LL SH RH P + LRF S+ S IKPVSYA KPQ +
Sbjct: 1 MAHLRLLLSHSSRHHPQPHR-LISLLRFSSNTGSGSGSGPTPPPIKPVSYAPKPQPAPE- 58
Query: 213 DAPSQTPAPQPESDSSSALPAATVPDSSSEQPIPRPWTRADARFVKDA-PRISPVSYPTK 389
+AP+ P D S P P S P + WTR + RFVKDA P I+PVSYP +
Sbjct: 59 EAPAAAEEAAPSDDPGSRPPPP--PRRSQGPPQRQQWTREEMRFVKDAGPSITPVSYPAR 116
Query: 390 VAPLPEDRTSEAT--EG-GDDALKREAREIESNARV--KSYFTVQAEEV-IPFPTLIKQE 551
VAPLPEDR +E EG D+ L+ E IE +A +S+F +QAEE P+PTLI E
Sbjct: 117 VAPLPEDRPAEEAPPEGPADEGLRGEGERIEMDATRARRSFFGMQAEEEQAPYPTLIPVE 176
Query: 552 KRPQKLPMDLGEAIREMKASTTTKKRNFLETVEAHVNLGVDPRRGDQMVRGALTLPHGSG 731
KRPQK+ +DL +AIRE+K S KKRNF ETVEAHV LGVDPRRGDQMVRGALTLPHG+G
Sbjct: 177 KRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGVDPRRGDQMVRGALTLPHGTG 236
Query: 732 KTVRVAVFXXXXXXXXXXXXXXDIVXXXXXXXXXXXXXXXXNFDKCIATPMFMPRLSKIA 911
KTVRVAVF D+V +FDKCIATPM+MPRLSK+A
Sbjct: 237 KTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSKVA 296
Query: 912 RILGPRGLMPNPKLGSVTSNVSIAVKEAKSGRIDFKIDKTAIVHVGLGKVNFSDEALREN 1091
RILGPRGLMPNPKLGSVT++VS AVK AKSGR+DFKIDKTAIVHVGLGK+NFSDE LREN
Sbjct: 297 RILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKINFSDENLREN 356
Query: 1092 IGAFVNALL 1118
IGAFV+ALL
Sbjct: 357 IGAFVHALL 365
>gb|EEC80778.1| hypothetical protein OsI_23301 [Oryza sativa Indica Group]
Length = 417
Score = 359 bits (921), Expect = 8e-97
Identities = 212/369 (57%), Positives = 243/369 (65%), Gaps = 15/369 (4%)
Frame = +3
Query: 57 MARLELLFSHGRRHLSAPKLPFLGFLRFFSSDSS--------TVIKPVSYAVKPQESSSS 212
MA L LL SH RH P + L F S+ S IKPVSYA KPQ +
Sbjct: 1 MAHLRLLLSHSSRHHPQPHR-LISLLHFSSNTGSGSGSGPTPPPIKPVSYAPKPQPAPE- 58
Query: 213 DAPSQTPAPQPESDSSSALPAATVPDSSSEQPIPRPWTRADARFVKDA-PRISPVSYPTK 389
+AP+ P D S P P S P + WTR + RFVKDA P I+PVSYP +
Sbjct: 59 EAPAAAEEAAPSDDPGSRPPPP--PRRSQGPPQRQQWTREEMRFVKDAGPSITPVSYPAR 116
Query: 390 VAPLPEDRTSEAT--EG-GDDALKREAREIESNARV--KSYFTVQAEEV-IPFPTLIKQE 551
VAPLPEDR +E EG D+ L+ E IE +A +S+F +QAEE P+PTLI E
Sbjct: 117 VAPLPEDRPAEEAPPEGPADEGLRGEGERIEMDATRARRSFFGMQAEEEQAPYPTLIPVE 176
Query: 552 KRPQKLPMDLGEAIREMKASTTTKKRNFLETVEAHVNLGVDPRRGDQMVRGALTLPHGSG 731
KRPQK+ +DL +AIRE+K S KKRNF ETVEAHV LGVDPRRGDQMVRGALTLPHG+G
Sbjct: 177 KRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGVDPRRGDQMVRGALTLPHGTG 236
Query: 732 KTVRVAVFXXXXXXXXXXXXXXDIVXXXXXXXXXXXXXXXXNFDKCIATPMFMPRLSKIA 911
KTVRVAVF D+V +FDKCIATPM+MPRLSK+A
Sbjct: 237 KTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSKVA 296
Query: 912 RILGPRGLMPNPKLGSVTSNVSIAVKEAKSGRIDFKIDKTAIVHVGLGKVNFSDEALREN 1091
RILGPRGLMPNPKLGSVT++VS AVK AKSGR+DFKIDKTAIVHVGLGK+NFSDE LREN
Sbjct: 297 RILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKINFSDENLREN 356
Query: 1092 IGAFVNALL 1118
IGAFV+ALL
Sbjct: 357 IGAFVHALL 365
>ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG34349.1| 50S ribosomal
protein L1 [Zea mays]
Length = 409
Score = 355 bits (911), Expect = 1e-95
Identities = 207/368 (56%), Positives = 247/368 (67%), Gaps = 14/368 (3%)
Frame = +3
Query: 57 MARLELLFSHGRRHLSAPKLPFLGFLRFFSSDSSTV--------IKPVSYAVKPQESSSS 212
MA L+LLFS+ RR+ P+ L L FSSD+ + IKPVSYA KPQ+ +
Sbjct: 1 MAHLQLLFSYSRRN---PQRHRLLSLFHFSSDAKSSSASPPPPPIKPVSYAPKPQQQAPP 57
Query: 213 DAPSQTPAPQPESDSSSALPAATVPDSSSEQPIP-RPWTRADARFVKDA-PRISPVSYPT 386
+ + P S LP +QP+P R WTR D R+VKDA P ISPVSYP+
Sbjct: 58 EESAAPTTPDVAPRDQSPLPRRP------QQPMPPREWTRQDMRYVKDAAPAISPVSYPS 111
Query: 387 KVAPLPEDRT--SEATEGGDDALKREAREIESNA--RVKSYFTVQAEEVIPFPTLIKQEK 554
+VAPLPEDR E E D L+ E+ I+ NA +S F + E+ +P+PT+I K
Sbjct: 112 RVAPLPEDRPVGGEVEEVQDGGLQGESERIQMNAVRPTRSVFGMHEEDRLPYPTVIPVVK 171
Query: 555 RPQKLPMDLGEAIREMKASTTTKKRNFLETVEAHVNLGVDPRRGDQMVRGALTLPHGSGK 734
RPQK+ +DL +AIR +K S KKRNF+ETVEAHV LGVDPRRGDQMVRGALTLPHG+GK
Sbjct: 172 RPQKVAIDLIDAIRLVKTSANEKKRNFVETVEAHVILGVDPRRGDQMVRGALTLPHGTGK 231
Query: 735 TVRVAVFXXXXXXXXXXXXXXDIVXXXXXXXXXXXXXXXXNFDKCIATPMFMPRLSKIAR 914
TVRVAVF D+V +FDKCIATPMFMPRLSK+AR
Sbjct: 232 TVRVAVFAEGPGADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMFMPRLSKVAR 291
Query: 915 ILGPRGLMPNPKLGSVTSNVSIAVKEAKSGRIDFKIDKTAIVHVGLGKVNFSDEALRENI 1094
ILGPRGLMPNPKLGSVT++VS AVK AKSGR+DFKIDKTAIVHVGLGKVNF++E+LRENI
Sbjct: 292 ILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFTEESLRENI 351
Query: 1095 GAFVNALL 1118
GAFV+ALL
Sbjct: 352 GAFVHALL 359
>ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Brachypodium distachyon]
Length = 405
Score = 354 bits (909), Expect = 2e-95
Identities = 206/364 (56%), Positives = 245/364 (67%), Gaps = 10/364 (2%)
Frame = +3
Query: 57 MARLELLFSHGRRHLSAPKLPFLGFLRFFSSDSSTV---IKPVSYAVKPQESSSSDAPSQ 227
MA L LL S R H +L L RFFS S++ IKPVSYA KPQ + ++
Sbjct: 1 MAHLRLLLSRSRCHPDPHRL--LPLFRFFSDSSTSAPPPIKPVSYAPKPQAPPEETSAAE 58
Query: 228 TPAPQPESDSSSALPAATVPDSSSEQPIPRPWTRADARFVKDA-PRISPVSYPTKVAPLP 404
P+ P+S P +QP P +TR + RFVKDA P I+PVSYP++V PLP
Sbjct: 59 APSASPDSQFPP-------PRRPQQQPPPPQFTRQEMRFVKDAGPAIAPVSYPSRVVPLP 111
Query: 405 EDRTSE--ATEGG-DDALKREAREIESN-ARVK-SYFTVQAEE-VIPFPTLIKQEKRPQK 566
+D ++ A EG ++ L+ E IE AR + S F VQ EE +P+PTLI KRPQK
Sbjct: 112 DDHPADEGAGEGAVEEGLRGEGERIEMEVARARRSIFGVQVEEETVPYPTLIPVVKRPQK 171
Query: 567 LPMDLGEAIREMKASTTTKKRNFLETVEAHVNLGVDPRRGDQMVRGALTLPHGSGKTVRV 746
+ +DL +A+RE+K+S KKRNF ETVEAHV LGVDPRRGDQMVRGA+TLPHG+GKTVRV
Sbjct: 172 VAIDLVDALREIKSSANEKKRNFTETVEAHVMLGVDPRRGDQMVRGAITLPHGTGKTVRV 231
Query: 747 AVFXXXXXXXXXXXXXXDIVXXXXXXXXXXXXXXXXNFDKCIATPMFMPRLSKIARILGP 926
AVF D+V +FDKCIATPMFMPRLSK+ARILGP
Sbjct: 232 AVFAEGPAAEEAKAAGADVVGGDELIEEIRKGGGKLSFDKCIATPMFMPRLSKVARILGP 291
Query: 927 RGLMPNPKLGSVTSNVSIAVKEAKSGRIDFKIDKTAIVHVGLGKVNFSDEALRENIGAFV 1106
RGLMPNPKLGSVT++VS AVK AKSGR+DFKIDKTAIVHVGLGKVNFS+E+LRENIGAFV
Sbjct: 292 RGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFSEESLRENIGAFV 351
Query: 1107 NALL 1118
NALL
Sbjct: 352 NALL 355
>gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]
Length = 409
Score = 353 bits (906), Expect = 4e-95
Identities = 207/368 (56%), Positives = 246/368 (66%), Gaps = 14/368 (3%)
Frame = +3
Query: 57 MARLELLFSHGRRHLSAPKLPFLGFLRFFSSDSSTV--------IKPVSYAVKPQESSSS 212
MA L LLFS+ RR+ P+ L L FSSD+ + IKPVSYA KPQ+ +
Sbjct: 1 MAHLRLLFSYLRRN---PQRHRLLSLFHFSSDAKSSSASPPPPPIKPVSYAPKPQQQAPP 57
Query: 213 DAPSQTPAPQPESDSSSALPAATVPDSSSEQPIP-RPWTRADARFVKDA-PRISPVSYPT 386
+ + P S LP +QP+P R WTR D R+VKDA P ISPVSYP+
Sbjct: 58 EESAAPTTPDVAPRDQSPLPRRP------QQPMPPREWTRQDMRYVKDAAPAISPVSYPS 111
Query: 387 KVAPLPEDRT--SEATEGGDDALKREAREIESNAR--VKSYFTVQAEEVIPFPTLIKQEK 554
+VAPLPEDR E E D L+ E+ I+ NA +S F + E+ +P+PT+I K
Sbjct: 112 RVAPLPEDRPVGGEVEEVQDGGLQGESERIQMNAARPTRSVFGMHEEDRLPYPTVIPVVK 171
Query: 555 RPQKLPMDLGEAIREMKASTTTKKRNFLETVEAHVNLGVDPRRGDQMVRGALTLPHGSGK 734
RPQK+ +DL +AIR +K S KKRNF+ETVEAHV LGVDPRRGDQMVRGALTLPHG+GK
Sbjct: 172 RPQKVAIDLIDAIRLVKTSANEKKRNFVETVEAHVILGVDPRRGDQMVRGALTLPHGTGK 231
Query: 735 TVRVAVFXXXXXXXXXXXXXXDIVXXXXXXXXXXXXXXXXNFDKCIATPMFMPRLSKIAR 914
TVRVAVF D+V +FDKCIATPMFMPRLSK+AR
Sbjct: 232 TVRVAVFAEGPGADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMFMPRLSKVAR 291
Query: 915 ILGPRGLMPNPKLGSVTSNVSIAVKEAKSGRIDFKIDKTAIVHVGLGKVNFSDEALRENI 1094
ILGPRGLMPNPKLGSVT++VS AVK AKSGR+DFKIDKTAIVHVGLGKVNF++E+LRENI
Sbjct: 292 ILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFTEESLRENI 351
Query: 1095 GAFVNALL 1118
GAFV+ALL
Sbjct: 352 GAFVHALL 359