BLASTX nr result

ID: Dioscorea21_contig00009341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009341
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteo...   239   6e-61
ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycin...   238   2e-60
ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|1...   237   3e-60
ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo...   236   5e-60
gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]       236   7e-60

>ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 4, chloroplastic-like [Glycine max]
          Length = 304

 Score =  239 bits (611), Expect = 6e-61
 Identities = 134/206 (65%), Positives = 144/206 (69%), Gaps = 4/206 (1%)
 Frame = -2

Query: 1003 MPSLSSKTGKTRFYNGA--PFRTSLTSDFVAPFVG-GGVTSEFSGQKIXXXXXXXXXXXX 833
            +PS S      R  N +  P RTSL++ FVAP+ G    +S FSG K+            
Sbjct: 19   LPSSSRTVTPIRCMNTSTSPVRTSLSTSFVAPYAGICSASSPFSGHKLRPSSLNPASFLG 78

Query: 832  XXXXG-VVTMVIPFLRGNAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQY 656
                  VVTMVIPF RG+AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQY
Sbjct: 79   SNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQY 138

Query: 655  EDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVXXXXXXXXXXXX 476
            ED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCV            
Sbjct: 139  EDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLA 198

Query: 475  XXXXXXXXXLPSSTIMIKQPIARFQG 398
                     LPSSTIMI+QPIARFQG
Sbjct: 199  AGAKGNRSALPSSTIMIRQPIARFQG 224



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -1

Query: 260 KSKEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGREDRSVVSDLRKAQLI 105
           K+ EQIE DI+RPKYFSPSEAVEYGIIDKV+YN+RG EDR VVSDL+KA+LI
Sbjct: 253 KTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGTEDRGVVSDLKKARLI 304


>ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max]
            gi|255635880|gb|ACU18287.1| unknown [Glycine max]
          Length = 304

 Score =  238 bits (607), Expect = 2e-60
 Identities = 134/206 (65%), Positives = 143/206 (69%), Gaps = 4/206 (1%)
 Frame = -2

Query: 1003 MPSLSSKTGKTRFYNGAP--FRTSLTSDFVAPFVG-GGVTSEFSGQKIXXXXXXXXXXXX 833
            +PS S      R  N +    RTSL+S+FVAP+ G     S FSG K+            
Sbjct: 19   LPSSSRTATPIRAMNSSTSSVRTSLSSNFVAPYTGINSAYSLFSGHKLRLSSLNPGSFRG 78

Query: 832  XXXXG-VVTMVIPFLRGNAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQY 656
                  VVTMVIPF RG+AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQY
Sbjct: 79   SNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQY 138

Query: 655  EDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVXXXXXXXXXXXX 476
            ED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCV            
Sbjct: 139  EDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLA 198

Query: 475  XXXXXXXXXLPSSTIMIKQPIARFQG 398
                     LPSSTIMI+QPIARFQG
Sbjct: 199  AGAKGNRSALPSSTIMIRQPIARFQG 224



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -1

Query: 260 KSKEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGREDRSVVSDLRKAQLI 105
           K+ EQIE DI+RPKYFSPSEAVEYGIIDKV+YN+RG EDR VVSDL+KA+LI
Sbjct: 253 KTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGSEDRGVVSDLKKARLI 304


>ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|118483146|gb|ABK93479.1|
           unknown [Populus trichocarpa]
           gi|222870265|gb|EEF07396.1| predicted protein [Populus
           trichocarpa]
          Length = 310

 Score =  237 bits (605), Expect = 3e-60
 Identities = 125/184 (67%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
 Frame = -2

Query: 946 RTSLTSDFVAPFVGGGVTSEFSGQKIXXXXXXXXXXXXXXXXG-VVTMVIPFLRGNAWEQ 770
           R SL++ F++PF GG +T +FSG KI                  VVTMVIP+ RG+AWEQ
Sbjct: 47  RASLSTCFLSPFAGGSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQ 106

Query: 769 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEK 590
           PPPDLASYL+KNRIVYLGMSLVPSVTELILAEFLYLQYED EKPIYLYINSTGTTKGGEK
Sbjct: 107 PPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEK 166

Query: 589 LGYETEAFAIYDVMRYVKPPIFTLCVXXXXXXXXXXXXXXXXXXXXXLPSSTIMIKQPIA 410
           LGYETEAFAIYDVM YVKPPIFTLCV                     LPSSTIM+KQPI 
Sbjct: 167 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQPIG 226

Query: 409 RFQG 398
           RFQG
Sbjct: 227 RFQG 230



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = -1

Query: 263 GKSKEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGREDRSVVSDLRKAQLI 105
           GK  E+IE DI RPKYFSP+EAVEYGIIDKV+YNER  EDR VVSDL+KAQLI
Sbjct: 258 GKLPEEIEADISRPKYFSPTEAVEYGIIDKVIYNERTTEDRGVVSDLKKAQLI 310


>ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
           gi|449510487|ref|XP_004163680.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
          Length = 304

 Score =  236 bits (603), Expect = 5e-60
 Identities = 127/202 (62%), Positives = 143/202 (70%), Gaps = 2/202 (0%)
 Frame = -2

Query: 997 SLSSKTGKTRFYNGAPFRTS-LTSDFVAPFVGGGVTSEFSGQKIXXXXXXXXXXXXXXXX 821
           S + K+ +T   + +  R + L+++F+ PF GG V+ EFSG K+                
Sbjct: 23  SHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGEFSGVKLRPSSLNPNYSPGSKGK 82

Query: 820 G-VVTMVIPFLRGNAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDAE 644
             VVTMVIPF RG+AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYED  
Sbjct: 83  RGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDET 142

Query: 643 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVXXXXXXXXXXXXXXXX 464
           KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPPIFTLCV                
Sbjct: 143 KPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAP 202

Query: 463 XXXXXLPSSTIMIKQPIARFQG 398
                LPSSTIMIK+PIARFQG
Sbjct: 203 GNRSALPSSTIMIKEPIARFQG 224



 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 46/53 (86%), Positives = 48/53 (90%)
 Frame = -1

Query: 263 GKSKEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGREDRSVVSDLRKAQLI 105
           GKS E+IE DIRRPKYFSPSEAVEYGIIDKVLYNER  EDR VVSDL+KAQLI
Sbjct: 252 GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI 304


>gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
          Length = 305

 Score =  236 bits (602), Expect = 7e-60
 Identities = 126/184 (68%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
 Frame = -2

Query: 946 RTSLTSDFVAPFVGGGVTSEFSGQKIXXXXXXXXXXXXXXXXG-VVTMVIPFLRGNAWEQ 770
           R SL++ F+ PF G  ++SEFSG K+                  VVTMVI F RG+AWEQ
Sbjct: 41  RASLSTSFLCPFAGNSLSSEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQ 100

Query: 769 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEK 590
           PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYED  KPIYLYINSTGTTKGGEK
Sbjct: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEK 160

Query: 589 LGYETEAFAIYDVMRYVKPPIFTLCVXXXXXXXXXXXXXXXXXXXXXLPSSTIMIKQPIA 410
           LGYETEAFAIYDVMRYVKPPIFTLCV                     LPSSTIM+KQPIA
Sbjct: 161 LGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIA 220

Query: 409 RFQG 398
           RFQG
Sbjct: 221 RFQG 224



 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 47/53 (88%), Positives = 48/53 (90%)
 Frame = -1

Query: 263 GKSKEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGREDRSVVSDLRKAQLI 105
           GKS EQIE DIRRPKYFSPSEAVEYGIIDKVLYNER  EDR VVSDL+KAQLI
Sbjct: 252 GKSTEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERSTEDRGVVSDLKKAQLI 304


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