BLASTX nr result

ID: Dioscorea21_contig00009339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009339
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   282   e-104
ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2...   277   e-101
ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...   272   e-101
ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...   279   e-100
ref|XP_002451483.1| hypothetical protein SORBIDRAFT_04g002690 [S...   256   2e-99

>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
            gi|297735744|emb|CBI18431.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  282 bits (721), Expect(2) = e-104
 Identities = 131/149 (87%), Positives = 143/149 (95%)
 Frame = +2

Query: 602  FAFAHCTECRAVFILRANVPPDRWWLRLKFQFLVVRDHALIFIIVQLVVAFLGMLVYRFY 781
            FAFAHCTECRAVFILRANVPPDRWWLRLKFQ LV RDHA IF+IVQL+VAFLG+LVY+FY
Sbjct: 110  FAFAHCTECRAVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGVLVYKFY 169

Query: 782  GEELREMFGYEQHPYGFYSMAILAVVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 961
            GEELREMFGY++HPYGFY+MA+LA+VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE
Sbjct: 170  GEELREMFGYDEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 229

Query: 962  YVVENRDDNKDPPQLGPSHVTELRMLGLY 1048
            YVVE+R+ NKD P+L PSHVTELRMLGLY
Sbjct: 230  YVVEDREVNKDVPELDPSHVTELRMLGLY 258



 Score =  123 bits (309), Expect(2) = e-104
 Identities = 64/107 (59%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
 Frame = +1

Query: 226 MQLASNGIQVEVTLEIEPVLQQSTTTDDFEVLQSPSEIRLVSED-----DDPQGLDADEH 390
           MQL SN  Q E   E EP+L QS      E   +  EIR V  D      D + LD DE+
Sbjct: 1   MQLVSNDRQTEDGSETEPILCQSNIEQRLEESSTSCEIRTVEVDCSIVDGDLENLDTDEN 60

Query: 391 TNLVNADLPQCRICLDTEGDDLIAPCHCKGTQKYVHRSCLDNWRSTK 531
             LVNAD PQCRICLD  G+DLIAPCHC+GTQKYVHRSCLDNWRSTK
Sbjct: 61  CALVNADQPQCRICLDIGGEDLIAPCHCRGTQKYVHRSCLDNWRSTK 107


>ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1|
            predicted protein [Populus trichocarpa]
          Length = 259

 Score =  277 bits (708), Expect(2) = e-101
 Identities = 127/149 (85%), Positives = 143/149 (95%)
 Frame = +2

Query: 602  FAFAHCTECRAVFILRANVPPDRWWLRLKFQFLVVRDHALIFIIVQLVVAFLGMLVYRFY 781
            FAFAHCTECRA+F+LRANVP DRWWLRLKFQFLV RDHA IF++VQL+VAFLG+LVY+FY
Sbjct: 111  FAFAHCTECRAMFVLRANVPADRWWLRLKFQFLVARDHAFIFVVVQLIVAFLGVLVYKFY 170

Query: 782  GEELREMFGYEQHPYGFYSMAILAVVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 961
            GEELREMFGYE+HPYGFY+MA+LA+VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE
Sbjct: 171  GEELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 230

Query: 962  YVVENRDDNKDPPQLGPSHVTELRMLGLY 1048
            YVVE+R+ +KD P+LG SHV+ELRMLGLY
Sbjct: 231  YVVEDREASKDVPELGASHVSELRMLGLY 259



 Score =  119 bits (298), Expect(2) = e-101
 Identities = 63/109 (57%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
 Frame = +1

Query: 226 MQLASNGIQVEVTLEIEPVLQQSTTTDDFEVLQSPS--EIRLVSED-----DDPQGLDAD 384
           MQL SN  + E   E EP+L  S  +   E  +SPS  EI+ +  D     DD + +  D
Sbjct: 1   MQLVSNDSRKEDISESEPILSHSNISQHSEE-ESPSSLEIKSLGRDCEIHVDDSESIQID 59

Query: 385 EHTNLVNADLPQCRICLDTEGDDLIAPCHCKGTQKYVHRSCLDNWRSTK 531
           E  +LVN D PQCRICLD EG+DLIAPCHCKGTQKYVHRSCLDNWRSTK
Sbjct: 60  ETCHLVNPDHPQCRICLDNEGEDLIAPCHCKGTQKYVHRSCLDNWRSTK 108


>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223547231|gb|EEF48726.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 256

 Score =  272 bits (695), Expect(2) = e-101
 Identities = 125/149 (83%), Positives = 140/149 (93%)
 Frame = +2

Query: 602  FAFAHCTECRAVFILRANVPPDRWWLRLKFQFLVVRDHALIFIIVQLVVAFLGMLVYRFY 781
            FAFAHCTECRA FILRANVPPDRWWLRLKFQFLV RDH  IF++VQL+VAFLGM VY+FY
Sbjct: 108  FAFAHCTECRASFILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVYKFY 167

Query: 782  GEELREMFGYEQHPYGFYSMAILAVVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 961
            GEELREMFGYE+HPYGFY++A+LA+VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE
Sbjct: 168  GEELREMFGYEEHPYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 227

Query: 962  YVVENRDDNKDPPQLGPSHVTELRMLGLY 1048
            YVVE+R+ +K+ P+L  +HVTELRMLGLY
Sbjct: 228  YVVEDREASKNVPELDATHVTELRMLGLY 256



 Score =  122 bits (307), Expect(2) = e-101
 Identities = 62/105 (59%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
 Frame = +1

Query: 226 MQLASNGIQVEVTLEIEPVLQQSTTTDDFEVLQSPSEIRLVSED---DDPQGLDADEHTN 396
           MQL SN  Q E   E EP+L+QS      E   S  EI  + +D   DD + +  DE  +
Sbjct: 1   MQLVSNDSQKEDISEREPILRQSNIVQRSEESSSSCEITSIGQDCDGDDLESVHVDETCH 60

Query: 397 LVNADLPQCRICLDTEGDDLIAPCHCKGTQKYVHRSCLDNWRSTK 531
           LVN D PQCRICLD  G+DLIAPCHCKGTQKYVHRSCLDNWRSTK
Sbjct: 61  LVNPDQPQCRICLDNGGEDLIAPCHCKGTQKYVHRSCLDNWRSTK 105


>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
            gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score =  279 bits (714), Expect(2) = e-100
 Identities = 131/149 (87%), Positives = 143/149 (95%)
 Frame = +2

Query: 602  FAFAHCTECRAVFILRANVPPDRWWLRLKFQFLVVRDHALIFIIVQLVVAFLGMLVYRFY 781
            FAF+HCTECRAVFILRANVPPDRWWLRLKFQFLV RDHA IFIIVQLVVAFLG+LVY+FY
Sbjct: 109  FAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFY 168

Query: 782  GEELREMFGYEQHPYGFYSMAILAVVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 961
            G+ELREMFGYE+HPYGFY+MA+LA+VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE
Sbjct: 169  GDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 228

Query: 962  YVVENRDDNKDPPQLGPSHVTELRMLGLY 1048
            YVVE+R+  K+ P+L PSHVTELRMLGLY
Sbjct: 229  YVVEDREHVKNVPELDPSHVTELRMLGLY 257



 Score =  112 bits (280), Expect(2) = e-100
 Identities = 61/110 (55%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
 Frame = +1

Query: 226 MQLASNGIQVEVTLEIEPVLQQ--------STTTDDFEVLQSPSEIRLVSEDDDPQGLDA 381
           MQLASNG + E + E EP+L            ++   E++   +     S DDD Q +  
Sbjct: 1   MQLASNGDKEECS-ESEPILNHHHLHLPPPGESSFSCEIIPISAA---ASGDDDLQNVRV 56

Query: 382 DEHTNLVNADLPQCRICLDTEGDDLIAPCHCKGTQKYVHRSCLDNWRSTK 531
           DE  +LVNAD PQCRICLD  G+DLIAPCHCKGTQKYVHRSCLDNWRSTK
Sbjct: 57  DETCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTK 106


>ref|XP_002451483.1| hypothetical protein SORBIDRAFT_04g002690 [Sorghum bicolor]
            gi|241931314|gb|EES04459.1| hypothetical protein
            SORBIDRAFT_04g002690 [Sorghum bicolor]
          Length = 272

 Score =  256 bits (653), Expect(2) = 2e-99
 Identities = 119/149 (79%), Positives = 132/149 (88%)
 Frame = +2

Query: 602  FAFAHCTECRAVFILRANVPPDRWWLRLKFQFLVVRDHALIFIIVQLVVAFLGMLVYRFY 781
            FAF+HCTECRA F LRANVPPDRWWLRLKFQ LVVRDH LIF IVQLVVAF+GM+VYR Y
Sbjct: 124  FAFSHCTECRAAFFLRANVPPDRWWLRLKFQLLVVRDHTLIFFIVQLVVAFMGMVVYRVY 183

Query: 782  GEELREMFGYEQHPYGFYSMAILAVVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE 961
            G+ELREMFGYE+HPY FY+MA LA+VLVGLLYGFFIAIICGQRI ERHYHVLAKQELTKE
Sbjct: 184  GDELREMFGYEEHPYAFYAMATLAIVLVGLLYGFFIAIICGQRITERHYHVLAKQELTKE 243

Query: 962  YVVENRDDNKDPPQLGPSHVTELRMLGLY 1048
            Y+VE+ +     P L P+HVTEL++LGLY
Sbjct: 244  YIVEDLEGADQVPDLDPNHVTELKILGLY 272



 Score =  134 bits (337), Expect(2) = 2e-99
 Identities = 67/119 (56%), Positives = 82/119 (68%), Gaps = 12/119 (10%)
 Frame = +1

Query: 211 WMFFAMQLASNGIQVEVTLEIEP------VLQQSTTTDDFEVLQ------SPSEIRLVSE 354
           W+ F MQLAS+G Q E T++  P      VL    T+    +++      + SEI+ VS 
Sbjct: 3   WVLFIMQLASHGTQTEETMQSVPHCDHAEVLDSQPTSSQLNLIERSTEHLASSEIKPVSV 62

Query: 355 DDDPQGLDADEHTNLVNADLPQCRICLDTEGDDLIAPCHCKGTQKYVHRSCLDNWRSTK 531
           DDD + +DA+E T+LV  D+PQCRICLD EGDDLIAPC CKGTQKYVHRSCLDNWRSTK
Sbjct: 63  DDDNENVDANEETHLVIQDVPQCRICLDNEGDDLIAPCRCKGTQKYVHRSCLDNWRSTK 121


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