BLASTX nr result
ID: Dioscorea21_contig00009325
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00009325
(1320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vi... 295 2e-85
emb|CBI16750.3| unnamed protein product [Vitis vinifera] 295 2e-85
tpg|DAA36275.1| TPA: hypothetical protein ZEAMMB73_302708 [Zea m... 281 2e-83
ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|2... 286 3e-83
ref|XP_003580414.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like he... 280 8e-83
>ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vinifera]
Length = 1438
Score = 295 bits (755), Expect(2) = 2e-85
Identities = 144/195 (73%), Positives = 171/195 (87%)
Frame = +1
Query: 607 FSL*RFNIVQLFDKSFRSSHLRKMIVDLEVPRFDSGGIISQDPALSYLRSENNLNKDQRG 786
F++ RFN++QLF +S + SHLRKMIVDLEVPRFD G I SQDPA+SY+RSE +LN DQR
Sbjct: 966 FAVMRFNLIQLFLQSMQGSHLRKMIVDLEVPRFDGGCIFSQDPAISYIRSEKSLNNDQRQ 1025
Query: 787 AIQKILSAKDYALVLGMPGTGKTSTMVHAVKALLLRGASILLTSYTNTAFDNLLLKLKTE 966
AI KIL+AKDYAL+LGMPGTGKTSTMVHAVKALL+RGASILLTSYTN+A DNLL+KLK +
Sbjct: 1026 AILKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKAQ 1085
Query: 967 DIDFVRIGRHEAIHDDIRGHCFSASETCTVEDIRERMEQVRIVGVTCLGINHPLLANKTF 1146
+IDFVRIGRHE +H++I+GHCFS + +VEDI+ R++QV +V VTCLGI +PLLANK F
Sbjct: 1086 NIDFVRIGRHEVVHEEIQGHCFSGMDIHSVEDIKLRLDQVSVVAVTCLGITNPLLANKRF 1145
Query: 1147 DICIMDEAGQITLPV 1191
DICIMDEAGQ TLPV
Sbjct: 1146 DICIMDEAGQTTLPV 1160
Score = 48.9 bits (115), Expect(2) = 2e-85
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +2
Query: 365 ISLSRRLRLPWSNSSIELEDLVQEMWCIDKDEVSSSYAIMR*N 493
+ S+RLRLPWS S E +DL+ E++ I+KDE+ +S+A+MR N
Sbjct: 930 VCFSKRLRLPWSKRSSEEQDLLGEVFRINKDEIVTSFAVMRFN 972
>emb|CBI16750.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 295 bits (755), Expect(2) = 2e-85
Identities = 144/195 (73%), Positives = 171/195 (87%)
Frame = +1
Query: 607 FSL*RFNIVQLFDKSFRSSHLRKMIVDLEVPRFDSGGIISQDPALSYLRSENNLNKDQRG 786
F++ RFN++QLF +S + SHLRKMIVDLEVPRFD G I SQDPA+SY+RSE +LN DQR
Sbjct: 224 FAVMRFNLIQLFLQSMQGSHLRKMIVDLEVPRFDGGCIFSQDPAISYIRSEKSLNNDQRQ 283
Query: 787 AIQKILSAKDYALVLGMPGTGKTSTMVHAVKALLLRGASILLTSYTNTAFDNLLLKLKTE 966
AI KIL+AKDYAL+LGMPGTGKTSTMVHAVKALL+RGASILLTSYTN+A DNLL+KLK +
Sbjct: 284 AILKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKAQ 343
Query: 967 DIDFVRIGRHEAIHDDIRGHCFSASETCTVEDIRERMEQVRIVGVTCLGINHPLLANKTF 1146
+IDFVRIGRHE +H++I+GHCFS + +VEDI+ R++QV +V VTCLGI +PLLANK F
Sbjct: 344 NIDFVRIGRHEVVHEEIQGHCFSGMDIHSVEDIKLRLDQVSVVAVTCLGITNPLLANKRF 403
Query: 1147 DICIMDEAGQITLPV 1191
DICIMDEAGQ TLPV
Sbjct: 404 DICIMDEAGQTTLPV 418
Score = 48.9 bits (115), Expect(2) = 2e-85
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +2
Query: 365 ISLSRRLRLPWSNSSIELEDLVQEMWCIDKDEVSSSYAIMR*N 493
+ S+RLRLPWS S E +DL+ E++ I+KDE+ +S+A+MR N
Sbjct: 188 VCFSKRLRLPWSKRSSEEQDLLGEVFRINKDEIVTSFAVMRFN 230
>tpg|DAA36275.1| TPA: hypothetical protein ZEAMMB73_302708 [Zea mays]
Length = 1257
Score = 281 bits (720), Expect(2) = 2e-83
Identities = 137/195 (70%), Positives = 165/195 (84%)
Frame = +1
Query: 607 FSL*RFNIVQLFDKSFRSSHLRKMIVDLEVPRFDSGGIISQDPALSYLRSENNLNKDQRG 786
F + R NIVQLF ++ ++SHLRK+IVDLE PRFDSGG+ SQDPALSY+RS NLN DQ+
Sbjct: 793 FGIMRLNIVQLFAQNPQNSHLRKLIVDLEAPRFDSGGLFSQDPALSYIRSLPNLNNDQQR 852
Query: 787 AIQKILSAKDYALVLGMPGTGKTSTMVHAVKALLLRGASILLTSYTNTAFDNLLLKLKTE 966
++ KIL AKDYAL+LGMPGTGKT TMVHAVK+LL+RG SILLTSYTN+A D LL+KLKTE
Sbjct: 853 SLHKILGAKDYALILGMPGTGKTYTMVHAVKSLLIRGESILLTSYTNSAIDTLLMKLKTE 912
Query: 967 DIDFVRIGRHEAIHDDIRGHCFSASETCTVEDIRERMEQVRIVGVTCLGINHPLLANKTF 1146
+DF+RIGR EA+H D+R HC S +E +V+ I+ RMEQV++VGVTCLG+ HPLLA+K F
Sbjct: 913 GVDFIRIGRPEAVHPDVRAHCLSTTEAQSVDAIKARMEQVQVVGVTCLGMYHPLLAHKKF 972
Query: 1147 DICIMDEAGQITLPV 1191
D CIMDEAGQITLPV
Sbjct: 973 DTCIMDEAGQITLPV 987
Score = 55.8 bits (133), Expect(2) = 2e-83
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +2
Query: 365 ISLSRRLRLPWSNSSIELEDLVQEMWCIDKDEVSSSYAIMR*N 493
+SL RRLR+P SNS E EDL +E+W IDKDE SSS+ IMR N
Sbjct: 757 VSLPRRLRIPDSNSLSEQEDLTREIWRIDKDEFSSSFGIMRLN 799
>ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|222862027|gb|EEE99569.1|
predicted protein [Populus trichocarpa]
Length = 1152
Score = 286 bits (733), Expect(2) = 3e-83
Identities = 142/195 (72%), Positives = 169/195 (86%)
Frame = +1
Query: 607 FSL*RFNIVQLFDKSFRSSHLRKMIVDLEVPRFDSGGIISQDPALSYLRSENNLNKDQRG 786
FS+ RFN+VQLF +S +SSHLRKMIVDLE PRFDSG I SQDPALSY+ S NLN DQR
Sbjct: 693 FSVMRFNLVQLFLQSEQSSHLRKMIVDLEAPRFDSGCIFSQDPALSYIWSVKNLNGDQRR 752
Query: 787 AIQKILSAKDYALVLGMPGTGKTSTMVHAVKALLLRGASILLTSYTNTAFDNLLLKLKTE 966
AI K L+AKDYAL+LGMPGTGKTST+VHAVKA+L+RGASILLTSYTN+A DNLL+KLK +
Sbjct: 753 AILKTLTAKDYALILGMPGTGKTSTLVHAVKAMLMRGASILLTSYTNSAIDNLLIKLKAQ 812
Query: 967 DIDFVRIGRHEAIHDDIRGHCFSASETCTVEDIRERMEQVRIVGVTCLGINHPLLANKTF 1146
IDF+RIGRHE +H+++R +C SA + +VEDI+ R+EQV++V VTCLGI+ PLLANK F
Sbjct: 813 GIDFLRIGRHEVVHEEVRANCVSAMDVHSVEDIKLRLEQVKVVAVTCLGISSPLLANKKF 872
Query: 1147 DICIMDEAGQITLPV 1191
D+CIMDEAGQITLPV
Sbjct: 873 DVCIMDEAGQITLPV 887
Score = 50.1 bits (118), Expect(2) = 3e-83
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 365 ISLSRRLRLPWSNSSIELEDLVQEMWCIDKDEVSSSYAIMR*N 493
+S + LRLP SNSS E DL +E+W IDKDE +S+++MR N
Sbjct: 657 VSFPKHLRLPGSNSSSEAHDLFREVWQIDKDEFMTSFSVMRFN 699
>ref|XP_003580414.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Brachypodium
distachyon]
Length = 1281
Score = 280 bits (715), Expect(2) = 8e-83
Identities = 133/195 (68%), Positives = 167/195 (85%)
Frame = +1
Query: 607 FSL*RFNIVQLFDKSFRSSHLRKMIVDLEVPRFDSGGIISQDPALSYLRSENNLNKDQRG 786
F+ R N++QLF ++ ++S +RK++VDLE PRFDSGG++SQDPALSYLRS +LN DQ+
Sbjct: 809 FATMRLNLIQLFAQNPQNSKIRKLVVDLEAPRFDSGGLLSQDPALSYLRSLTSLNDDQQR 868
Query: 787 AIQKILSAKDYALVLGMPGTGKTSTMVHAVKALLLRGASILLTSYTNTAFDNLLLKLKTE 966
++QKIL+AKDYAL+LGMPGTGKT TMVHAVK+ L RG SILLTSYTN+A DNLL+KLK+E
Sbjct: 869 SLQKILAAKDYALILGMPGTGKTYTMVHAVKSFLRRGESILLTSYTNSAIDNLLMKLKSE 928
Query: 967 DIDFVRIGRHEAIHDDIRGHCFSASETCTVEDIRERMEQVRIVGVTCLGINHPLLANKTF 1146
+DF+RIGRHEA+H D+R HC S +E +V+ I+ RMEQV++VGVTCLG+ HPLLA+K F
Sbjct: 929 GVDFIRIGRHEAVHPDVRAHCLSTTEVHSVDAIKTRMEQVQVVGVTCLGVYHPLLAHKKF 988
Query: 1147 DICIMDEAGQITLPV 1191
D CIMDEAGQITLPV
Sbjct: 989 DTCIMDEAGQITLPV 1003
Score = 55.5 bits (132), Expect(2) = 8e-83
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +2
Query: 365 ISLSRRLRLPWSNSSIELEDLVQEMWCIDKDEVSSSYAIMR*N 493
+SLSRRLRLP S+S +E DL +E+W IDKDE SSS+A MR N
Sbjct: 773 VSLSRRLRLPGSSSLLEQGDLQRELWRIDKDEFSSSFATMRLN 815