BLASTX nr result

ID: Dioscorea21_contig00009310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009310
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]                144   6e-33
ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-lik...   140   1e-31
dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare]    139   3e-31
gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indi...   138   5e-31
ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group] g...   138   5e-31

>gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
          Length = 823

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/77 (85%), Positives = 71/77 (92%)
 Frame = +2

Query: 2   EKVAENNIGKIRKVYDAFLVEFPLCFGYWKKYADHEGRLDSVGKVIEVYERAVLAVTYSV 181
           EKVAE NI KIRKVYDAFLVEFPLCFGYWKKYADHE RLDS  KV+EVYERA+LAVTYSV
Sbjct: 179 EKVAETNILKIRKVYDAFLVEFPLCFGYWKKYADHEARLDSANKVLEVYERAILAVTYSV 238

Query: 182 DIWLHYCVFTMSTYEDP 232
           DIWL+YC+F +STYEDP
Sbjct: 239 DIWLYYCLFAISTYEDP 255


>ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-like [Brachypodium
           distachyon]
          Length = 724

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/77 (81%), Positives = 71/77 (92%)
 Frame = +2

Query: 2   EKVAENNIGKIRKVYDAFLVEFPLCFGYWKKYADHEGRLDSVGKVIEVYERAVLAVTYSV 181
           E++AE+NI K+RKVYDAFL EFPLCFGYWKKYADHEGRLD V KVIEV+ERAVLAVTYSV
Sbjct: 80  ERIAESNILKMRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVSKVIEVFERAVLAVTYSV 139

Query: 182 DIWLHYCVFTMSTYEDP 232
           DIWL+YC F +STY+DP
Sbjct: 140 DIWLNYCQFAISTYDDP 156


>dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 437

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/77 (81%), Positives = 68/77 (88%)
 Frame = +2

Query: 2   EKVAENNIGKIRKVYDAFLVEFPLCFGYWKKYADHEGRLDSVGKVIEVYERAVLAVTYSV 181
           E++AE+NI KIRKVYDAFL EFPLCFGYWKKYADHEGRLD V KV EVYERAVLAVTYSV
Sbjct: 169 ERIAESNIVKIRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVNKVFEVYERAVLAVTYSV 228

Query: 182 DIWLHYCVFTMSTYEDP 232
           DIW +YC F +STY DP
Sbjct: 229 DIWCNYCQFAISTYNDP 245


>gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indica Group]
          Length = 789

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/77 (83%), Positives = 68/77 (88%)
 Frame = +2

Query: 2   EKVAENNIGKIRKVYDAFLVEFPLCFGYWKKYADHEGRLDSVGKVIEVYERAVLAVTYSV 181
           EK AE+NI K+RKVYDAFL EFPLCFGYWKKYADHE RLD V KVIEVYERAVLAVTYSV
Sbjct: 148 EKTAESNILKLRKVYDAFLAEFPLCFGYWKKYADHEARLDGVTKVIEVYERAVLAVTYSV 207

Query: 182 DIWLHYCVFTMSTYEDP 232
           DIW +YC F +STYEDP
Sbjct: 208 DIWYNYCQFAISTYEDP 224


>ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group]
           gi|108706795|gb|ABF94590.1| Pre-mRNA processing protein
           prp39, putative, expressed [Oryza sativa Japonica Group]
           gi|113547811|dbj|BAF11254.1| Os03g0210400 [Oryza sativa
           Japonica Group]
          Length = 789

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/77 (83%), Positives = 68/77 (88%)
 Frame = +2

Query: 2   EKVAENNIGKIRKVYDAFLVEFPLCFGYWKKYADHEGRLDSVGKVIEVYERAVLAVTYSV 181
           EK AE+NI K+RKVYDAFL EFPLCFGYWKKYADHE RLD V KVIEVYERAVLAVTYSV
Sbjct: 148 EKTAESNILKLRKVYDAFLAEFPLCFGYWKKYADHEARLDGVTKVIEVYERAVLAVTYSV 207

Query: 182 DIWLHYCVFTMSTYEDP 232
           DIW +YC F +STYEDP
Sbjct: 208 DIWYNYCQFAISTYEDP 224


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