BLASTX nr result

ID: Dioscorea21_contig00009287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009287
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV89263.1| IAA9 [Musa acuminata AAA Group]                        214   1e-53
gb|ADL36581.1| ARF domain class transcription factor [Malus x do...   173   2e-41
ref|XP_002284128.1| PREDICTED: auxin-responsive protein IAA27 is...   173   2e-41
ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 is...   173   2e-41
ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-li...   166   3e-39

>gb|AEV89263.1| IAA9 [Musa acuminata AAA Group]
          Length = 314

 Score =  214 bits (545), Expect = 1e-53
 Identities = 121/202 (59%), Positives = 138/202 (68%), Gaps = 12/202 (5%)
 Frame = -1

Query: 572 MTPPLEHDYIGLSATMEAPEKVTAGEEGHKLGLKETELRLGPPGSESPERTKGMGLTLGL 393
           M+PPLEHDYIGLS    +        E   L LKETELRLG PGSESP+R + +GLTLGL
Sbjct: 1   MSPPLEHDYIGLSELPFSAAAAAGAAEDGALNLKETELRLGLPGSESPDRKEKVGLTLGL 60

Query: 392 MPKSFVSGAKRGFSDAIDXXXXXXXXXXXG-SEVEVGKGGGLFSPKGE-------GSGNG 237
           +PK F SGAKRGFSDAID             SEVE GKGG LFSP+G+       G GN 
Sbjct: 61  LPKVFGSGAKRGFSDAIDGAGKWELASGGCGSEVEGGKGGALFSPRGQDGGGQLSGHGNA 120

Query: 236 VKDGAGQAGEVKK---GQNGGKDA-DRGMAPALKAQVVGWPPIRSYRKNTMATNPSKNKD 69
            KD A +A   ++   GQ G     DRG+APA KAQV+GWPPIRSYRKNTMATNPSK+K+
Sbjct: 121 GKDVAPKADGQERMAAGQVGNSAGNDRGVAPAAKAQVLGWPPIRSYRKNTMATNPSKDKE 180

Query: 68  DAEGKQSAGCLYVKVSMDGAPY 3
           +A+ KQ  GCLYVKVSMDGAPY
Sbjct: 181 NADEKQGPGCLYVKVSMDGAPY 202


>gb|ADL36581.1| ARF domain class transcription factor [Malus x domestica]
          Length = 319

 Score =  173 bits (439), Expect = 2e-41
 Identities = 113/218 (51%), Positives = 128/218 (58%), Gaps = 28/218 (12%)
 Frame = -1

Query: 572 MTPPLEHDYIGLSATMEAPEKVTAGEEGHKLGLKETELRLGPPGSESPERTKGMGLTLGL 393
           M+  LEHDYIGLS +ME   K  A      L LK TELRLG PGS+SPER  G G   G+
Sbjct: 1   MSISLEHDYIGLSPSMETSTKSDA------LNLKATELRLGLPGSQSPERDGGGGGGGGV 54

Query: 392 MPKS----------FVSGAKRGFSDAIDXXXXXXXXXXXG-SEVEVGKGGGLFSPKGEGS 246
             K+           VSGAKRGFSDAID           G SEVE+GKGG L SP+G  +
Sbjct: 55  EEKATGFSVCGVKGLVSGAKRGFSDAIDGASGKWVFSGSGGSEVELGKGGNLLSPRGVNA 114

Query: 245 GNGVKDGA-------GQAGE-VKKG---------QNGGKDADRGMAPALKAQVVGWPPIR 117
           G  +  G        G AG  VK G         +   + +    APA KAQVVGWPPIR
Sbjct: 115 GKALAAGCEPSNQPTGLAGSAVKDGVQQSPKPLHEKKSQGSAGSTAPAAKAQVVGWPPIR 174

Query: 116 SYRKNTMATNPSKNKDDAEGKQSAGCLYVKVSMDGAPY 3
           S+RKN+MA+ PSKN DDAEGK  AGCLYVKVSMDGAPY
Sbjct: 175 SFRKNSMASVPSKNGDDAEGKMGAGCLYVKVSMDGAPY 212


>ref|XP_002284128.1| PREDICTED: auxin-responsive protein IAA27 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score =  173 bits (439), Expect = 2e-41
 Identities = 110/214 (51%), Positives = 131/214 (61%), Gaps = 24/214 (11%)
 Frame = -1

Query: 572 MTPPLEHDYIGLS--ATMEAPEKVTAGEEGHK-LGLKETELRLGPPGSESPERTKGMG-- 408
           M+  LEHDYIGLS  ++ME+ EK+T   EG   L LK TELRLG PGSESPER   +G  
Sbjct: 1   MSKQLEHDYIGLSEVSSMESSEKLTTDSEGSNGLNLKATELRLGLPGSESPERIDSVGGL 60

Query: 407 ----LTLGLMPKSFVSGAKRGFSDAIDXXXXXXXXXXXG-SEVEVGKGGGLFSPKGEGSG 243
                 LG++ K+ VSGAKRGFSDAID           G SE ++ KGGGLFSP+G G+G
Sbjct: 61  DKNGYPLGVL-KNLVSGAKRGFSDAIDGGSGKWVFSGSGGSETDLTKGGGLFSPRG-GNG 118

Query: 242 NGVKDGAGQAGEVKKGQNGGKDAD--------------RGMAPALKAQVVGWPPIRSYRK 105
            G   G  ++             D              +  APA KAQVVGWPPIRS+RK
Sbjct: 119 GGKHLGGSESNNQHSSLGTPVKNDVVPQSPKPMHEKKPQISAPAAKAQVVGWPPIRSFRK 178

Query: 104 NTMATNPSKNKDDAEGKQSAGCLYVKVSMDGAPY 3
           N+MA+N  KN +DAEGK  +GCLYVKVSMDGAPY
Sbjct: 179 NSMASNLPKNDEDAEGKLGSGCLYVKVSMDGAPY 212


>ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 isoform 1 [Vitis
           vinifera]
          Length = 320

 Score =  173 bits (439), Expect = 2e-41
 Identities = 110/214 (51%), Positives = 131/214 (61%), Gaps = 24/214 (11%)
 Frame = -1

Query: 572 MTPPLEHDYIGLS--ATMEAPEKVTAGEEGHK-LGLKETELRLGPPGSESPERTKGMG-- 408
           M+  LEHDYIGLS  ++ME+ EK+T   EG   L LK TELRLG PGSESPER   +G  
Sbjct: 1   MSKQLEHDYIGLSEVSSMESSEKLTTDSEGSNGLNLKATELRLGLPGSESPERIDSVGGL 60

Query: 407 ----LTLGLMPKSFVSGAKRGFSDAIDXXXXXXXXXXXG-SEVEVGKGGGLFSPKGEGSG 243
                 LG++ K+ VSGAKRGFSDAID           G SE ++ KGGGLFSP+G G+G
Sbjct: 61  DKNGYPLGVL-KNLVSGAKRGFSDAIDGGSGKWVFSGSGGSETDLTKGGGLFSPRG-GNG 118

Query: 242 NGVKDGAGQAGEVKKGQNGGKDAD--------------RGMAPALKAQVVGWPPIRSYRK 105
            G   G  ++             D              +  APA KAQVVGWPPIRS+RK
Sbjct: 119 GGKHLGGSESNNQHSSLGTPVKNDVVPQSPKPMHEKKPQISAPAAKAQVVGWPPIRSFRK 178

Query: 104 NTMATNPSKNKDDAEGKQSAGCLYVKVSMDGAPY 3
           N+MA+N  KN +DAEGK  +GCLYVKVSMDGAPY
Sbjct: 179 NSMASNLPKNDEDAEGKLGSGCLYVKVSMDGAPY 212


>ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-like isoform 2 [Vitis
           vinifera]
          Length = 334

 Score =  166 bits (421), Expect = 3e-39
 Identities = 114/241 (47%), Positives = 138/241 (57%), Gaps = 51/241 (21%)
 Frame = -1

Query: 572 MTPPLEHDYIGLSA--TME-APEKVTAG---------EEGHKLGLKETELRLGPPGSESP 429
           M+ PLEHDYIGLS   +ME A +K+++          E+   L L+ETELRLG PGSESP
Sbjct: 1   MSIPLEHDYIGLSEAPSMERASDKISSASSSTISSESEKSTALNLRETELRLGLPGSESP 60

Query: 428 ERTKGMGLTL--------------GLMPKSFVSGAKRGFSDAIDXXXXXXXXXXXGSEVE 291
           ER   +G++L              G + K FVSGAKRGFSDAID           GSEV+
Sbjct: 61  ERKPQLGVSLFGKDLEDKTNGYSLGSL-KGFVSGAKRGFSDAIDGSGKWVFSVNGGSEVD 119

Query: 290 VGKGGGLFSPKGEGSGNGVKDGAG-------------------------QAGEVKKGQNG 186
           +GKG  LFSP+G   GNGVK   G                         +  + KK Q  
Sbjct: 120 LGKGAVLFSPRG---GNGVKPLGGLDNNSAQKSCMPGPAMKDVAAPSSPKPVQEKKPQAS 176

Query: 185 GKDADRGMAPALKAQVVGWPPIRSYRKNTMATNPSKNKDDAEGKQSAGCLYVKVSMDGAP 6
             + +   APA KAQVVGWPPIRS+RKNTMA++ +KN +DAEGK   GCLYVKVSMDGAP
Sbjct: 177 AAN-EHASAPAAKAQVVGWPPIRSFRKNTMASS-AKNNEDAEGKSGLGCLYVKVSMDGAP 234

Query: 5   Y 3
           Y
Sbjct: 235 Y 235


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