BLASTX nr result

ID: Dioscorea21_contig00009282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009282
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26542.1| unknown [Picea sitchensis]                             158   4e-37
gb|ABK22473.1| unknown [Picea sitchensis]                             157   1e-36
ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   156   2e-36
gb|AFK41314.1| unknown [Lotus japonicus]                              155   5e-36
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...   155   5e-36

>gb|ABK26542.1| unknown [Picea sitchensis]
          Length = 91

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/80 (97%), Positives = 78/80 (97%)
 Frame = -3

Query: 495 SVKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 316
           S KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA
Sbjct: 11  SAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 70

Query: 315 FIRGNNVLYISTSKRTHGEG 256
           FIRGNNVLYISTSKRT GEG
Sbjct: 71  FIRGNNVLYISTSKRTLGEG 90


>gb|ABK22473.1| unknown [Picea sitchensis]
          Length = 91

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = -3

Query: 495 SVKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 316
           S KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA
Sbjct: 11  SAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 70

Query: 315 FIRGNNVLYISTSKRTHGEG 256
           FIRGNNVLYISTSKR+ GEG
Sbjct: 71  FIRGNNVLYISTSKRSLGEG 90


>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/80 (96%), Positives = 77/80 (96%)
 Frame = -3

Query: 495 SVKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 316
           S KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA
Sbjct: 11  STKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 70

Query: 315 FIRGNNVLYISTSKRTHGEG 256
           FIRGNNVLYISTSKRT  EG
Sbjct: 71  FIRGNNVLYISTSKRTLAEG 90


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  155 bits (391), Expect = 5e-36
 Identities = 76/80 (95%), Positives = 77/80 (96%)
 Frame = -3

Query: 495 SVKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 316
           + KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA
Sbjct: 10  TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 69

Query: 315 FIRGNNVLYISTSKRTHGEG 256
           FIRGNNVLYISTSKRT  EG
Sbjct: 70  FIRGNNVLYISTSKRTLAEG 89


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score =  155 bits (391), Expect = 5e-36
 Identities = 76/80 (95%), Positives = 77/80 (96%)
 Frame = -3

Query: 495 SVKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 316
           + KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA
Sbjct: 11  TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 70

Query: 315 FIRGNNVLYISTSKRTHGEG 256
           FIRGNNVLYISTSKRT  EG
Sbjct: 71  FIRGNNVLYISTSKRTLAEG 90


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