BLASTX nr result

ID: Dioscorea21_contig00009277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009277
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|2...   113   3e-23
ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
gb|ABK95860.1| unknown [Populus trichocarpa]                          109   5e-22
ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein...   108   8e-22
ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, ch...   103   4e-20

>ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|222845483|gb|EEE83030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  113 bits (283), Expect = 3e-23
 Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
 Frame = -2

Query: 708 NGNRTYLRKNPYVPVSTITRGRKRCFTVVAKAVXXXXXXXXXS-FVKYVRNAWNNSEDRL 532
           +G R   R    +P+STI + R+ C  VV KA             VK V+N W++SEDRL
Sbjct: 16  HGKRIPFRTLQKLPLSTI-KERQNCVAVVVKATGESSESSTSLSIVKSVQNIWDDSEDRL 74

Query: 531 ALVGLGFXXXXXXXXXXXXXXXIDKLPFIPSALEFIGILFSWWFIYRYLLFKPDREELVR 352
            LVGLGF               +DKLP +PSALEF+GIL+S WF+YRYLL KP+REEL +
Sbjct: 75  PLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVYRYLLLKPNREELFQ 134

Query: 351 NVKNSISDILGQ 316
            +K S+ DILGQ
Sbjct: 135 IIKKSVGDILGQ 146


>ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|222840724|gb|EEE78271.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  112 bits (279), Expect = 1e-22
 Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
 Frame = -2

Query: 708 NGNRTYLRKNPYVPVSTITRGRKRCFTVVAKAVXXXXXXXXXS-FVKYVRNAWNNSEDRL 532
           +G RT       +P+S I + R+ C +VV +A             VK V+N W++SEDRL
Sbjct: 16  HGKRTLSSTLQTLPLSPI-KDRQNCVSVVVRATGESSESSAPLGIVKSVKNIWDDSEDRL 74

Query: 531 ALVGLGFXXXXXXXXXXXXXXXIDKLPFIPSALEFIGILFSWWFIYRYLLFKPDREELVR 352
           ALVGLGF               IDKLP +PS LE IGILFS WFIYRYLLFKP+REEL +
Sbjct: 75  ALVGLGFAALVAIWTSAKLILAIDKLPVVPSVLELIGILFSSWFIYRYLLFKPNREELFQ 134

Query: 351 NVKNSISDILGQ 316
            +K S+++ILGQ
Sbjct: 135 IIKKSVANILGQ 146


>gb|ABK95860.1| unknown [Populus trichocarpa]
          Length = 146

 Score =  109 bits (273), Expect = 5e-22
 Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
 Frame = -2

Query: 672 VPVSTITRGRKRCFTVVAKAVXXXXXXXXXS-FVKYVRNAWNNSEDRLALVGLGFXXXXX 496
           +P+STI + R+ C  V  KA             VK V+N W++SEDRL LVGLGF     
Sbjct: 28  LPLSTI-KERQNCVAVAVKATGESSESSTSLSIVKSVQNIWDDSEDRLPLVGLGFAALVA 86

Query: 495 XXXXXXXXXXIDKLPFIPSALEFIGILFSWWFIYRYLLFKPDREELVRNVKNSISDILGQ 316
                     +DKLP +PSALEF+GIL+S WF+YRYLL KP+REEL + +K S+ DILGQ
Sbjct: 87  VWASANVITAVDKLPVVPSALEFVGILYSSWFVYRYLLLKPNREELFQIIKKSVGDILGQ 146


>ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|225442617|ref|XP_002284537.1| PREDICTED: thylakoid
           membrane phosphoprotein 14 kDa, chloroplastic isoform 1
           [Vitis vinifera] gi|297743263|emb|CBI36130.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  108 bits (271), Expect = 8e-22
 Identities = 60/119 (50%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
 Frame = -2

Query: 669 PVSTITRGRKRCFTVVAKAVXXXXXXXXXS-FVKYVRNAWNNSEDRLALVGLGFXXXXXX 493
           PVS I RGR+   +VVAKA             VK V+N W + EDR AL GLGF      
Sbjct: 29  PVS-INRGRQSSLSVVAKATGESSESSTTLSIVKSVQNVWGDPEDRFALFGLGFAAIVAV 87

Query: 492 XXXXXXXXXIDKLPFIPSALEFIGILFSWWFIYRYLLFKPDREELVRNVKNSISDILGQ 316
                    ID LP IP   EFIGIL+SWWFIYRYLLFKP+REEL   +  S+S++LGQ
Sbjct: 88  WASANLITAIDNLPLIPGVFEFIGILYSWWFIYRYLLFKPNREELFEIINKSVSEVLGQ 146


>ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
           putative [Ricinus communis] gi|223544924|gb|EEF46439.1|
           Thylakoid membrane phosphoprotein 14 kDa, chloroplast
           precursor, putative [Ricinus communis]
          Length = 146

 Score =  103 bits (256), Expect = 4e-20
 Identities = 60/130 (46%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = -2

Query: 702 NRTYLRKNPYV-PVSTITRGRKRCFTVVAKAVXXXXXXXXXSFVKYVRNAWNNSEDRLAL 526
           +RT L + P   PV  +   + R   V+  A          S VK V+N W++SEDR A+
Sbjct: 17  SRTTLFRTPQKGPVFPLKETQNRVAVVMKAAGESSESSSSLSIVKSVKNVWDSSEDRWAI 76

Query: 525 VGLGFXXXXXXXXXXXXXXXIDKLPFIPSALEFIGILFSWWFIYRYLLFKPDREELVRNV 346
            GLGF               +DKLP IPS LE IGIL+S WFIYRYLLFKPDREEL + +
Sbjct: 77  GGLGFAAIVGVWASANLVSAVDKLPLIPSVLELIGILYSSWFIYRYLLFKPDREELFQII 136

Query: 345 KNSISDILGQ 316
             S+S ILGQ
Sbjct: 137 NKSVSSILGQ 146


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