BLASTX nr result
ID: Dioscorea21_contig00009215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00009215
(1270 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase fami... 243 1e-61
gb|ACL54708.1| unknown [Zea mays] 243 1e-61
ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea ma... 238 2e-60
emb|CBI26041.3| unnamed protein product [Vitis vinifera] 237 5e-60
ref|NP_001048702.1| Os03g0108600 [Oryza sativa Japonica Group] g... 236 1e-59
>gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 649
Score = 243 bits (619), Expect = 1e-61
Identities = 148/342 (43%), Positives = 186/342 (54%), Gaps = 14/342 (4%)
Frame = +1
Query: 211 YKRIPMDTPGAYQLIDEHTGEKFIVWXXXXXXXXXXIPSEQVLSWKPEAVKSSDSLVDDD 390
+ ++PMDTPGAY+L+D TG IVW +PS VLS D
Sbjct: 51 FDKVPMDTPGAYRLVDRDTGRSVIVWGGTDDSDEASMPSPAVLS-----------RTTDR 99
Query: 391 RVARSLTGFSKLKASKIRGLVI-----KRSSGTRT---------LNCKENAPATYQEEPD 528
R ++ + F + KA KI+ LV KR S R+ N ++ +Y E
Sbjct: 100 RHSQGIGNFGRFKAQKIKSLVTRSAHRKRESSNRSSTAWSDESSFNGSDDEEESYFERRK 159
Query: 529 FVRARTRFGLLHDKGRDGDIQDGSGSFSNVRPDFVGEXXXXXXXXXXXXXXXXXXXXXXX 708
V R + RDG + S S+V + G+
Sbjct: 160 HVSDSERHPKMSSGSRDGRTRSAH-SLSSVLSQYRGDDDTDFPGSEATSGSKRWGNVADV 218
Query: 709 XXXXXXXXXXXXXNTTAAARLPQRSRKSANGGFFSNKSFENLGCSPYMVQSLKDLQFIRP 888
N PQR + +GGFFS +SF+ +GCS M+ +L++ F RP
Sbjct: 219 TYGRQNQKQREPLN------FPQR-KGPLDGGFFSRRSFKEIGCSDEMLGALRNFDFPRP 271
Query: 889 SHIQAMAYGPVLEGKSCIIADQSGSGKTLAYLAPTIQRLRQEELAGLHKSSARSPRVIIL 1068
SHIQAMAYGP+LEG+SC++ADQSGSGKTLAYL P IQ LR EE+ GLHKSS R+PRVI+L
Sbjct: 272 SHIQAMAYGPILEGRSCVVADQSGSGKTLAYLCPIIQNLRNEEVQGLHKSSPRNPRVIVL 331
Query: 1069 APTAELASQVLNNCRSISKVGVPFRSMVATGGFRQKTQLDNL 1194
PTAELASQVLNNCR ISK GVPFRSMVATGGFRQKTQL++L
Sbjct: 332 TPTAELASQVLNNCRLISKSGVPFRSMVATGGFRQKTQLESL 373
>gb|ACL54708.1| unknown [Zea mays]
Length = 424
Score = 243 bits (619), Expect = 1e-61
Identities = 148/342 (43%), Positives = 186/342 (54%), Gaps = 14/342 (4%)
Frame = +1
Query: 211 YKRIPMDTPGAYQLIDEHTGEKFIVWXXXXXXXXXXIPSEQVLSWKPEAVKSSDSLVDDD 390
+ ++PMDTPGAY+L+D TG IVW +PS VLS D
Sbjct: 51 FDKVPMDTPGAYRLVDRDTGRSVIVWGGTDDSDEASMPSPAVLS-----------RTTDR 99
Query: 391 RVARSLTGFSKLKASKIRGLVI-----KRSSGTRT---------LNCKENAPATYQEEPD 528
R ++ + F + KA KI+ LV KR S R+ N ++ +Y E
Sbjct: 100 RHSQGIGNFGRFKAQKIKSLVTRSAHRKRESSNRSSTAWSDESSFNGSDDEEESYFERRK 159
Query: 529 FVRARTRFGLLHDKGRDGDIQDGSGSFSNVRPDFVGEXXXXXXXXXXXXXXXXXXXXXXX 708
V R + RDG + S S+V + G+
Sbjct: 160 HVSDSERHPKMSSGSRDGRTRSAH-SLSSVLSQYRGDDDTDFPGSEATSGSKRWGNVADV 218
Query: 709 XXXXXXXXXXXXXNTTAAARLPQRSRKSANGGFFSNKSFENLGCSPYMVQSLKDLQFIRP 888
N PQR + +GGFFS +SF+ +GCS M+ +L++ F RP
Sbjct: 219 TYGRQNQKQREPLN------FPQR-KGPLDGGFFSRRSFKEIGCSDEMLGALRNFDFPRP 271
Query: 889 SHIQAMAYGPVLEGKSCIIADQSGSGKTLAYLAPTIQRLRQEELAGLHKSSARSPRVIIL 1068
SHIQAMAYGP+LEG+SC++ADQSGSGKTLAYL P IQ LR EE+ GLHKSS R+PRVI+L
Sbjct: 272 SHIQAMAYGPILEGRSCVVADQSGSGKTLAYLCPIIQNLRNEEVQGLHKSSPRNPRVIVL 331
Query: 1069 APTAELASQVLNNCRSISKVGVPFRSMVATGGFRQKTQLDNL 1194
PTAELASQVLNNCR ISK GVPFRSMVATGGFRQKTQL++L
Sbjct: 332 TPTAELASQVLNNCRLISKSGVPFRSMVATGGFRQKTQLESL 373
>ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea mays]
gi|219887353|gb|ACL54051.1| unknown [Zea mays]
gi|413957213|gb|AFW89862.1| putative DEAD-box
ATP-dependent RNA helicase family protein [Zea mays]
Length = 655
Score = 238 bits (607), Expect = 2e-60
Identities = 147/342 (42%), Positives = 184/342 (53%), Gaps = 14/342 (4%)
Frame = +1
Query: 211 YKRIPMDTPGAYQLIDEHTGEKFIVWXXXXXXXXXXIPSEQVLSWKPEAVKSSDSLVDDD 390
+ ++PMDTPGAY+L+D TG IVW +PS VLS + S
Sbjct: 51 FDKVPMDTPGAYRLVDRDTGRSVIVWGGTDDSDEASMPSPAVLSRTTDRRHSQGV----- 105
Query: 391 RVARSLTGFSKLKASKIRGLVI-----KRSSGTRT---------LNCKENAPATYQEEPD 528
+ F + KA KI+ LV KR S R+ N ++ +Y E
Sbjct: 106 GGGTGIGNFGRFKAQKIKSLVTRSAHRKRESSNRSSTAWSDESSFNGSDDEEESYFERRK 165
Query: 529 FVRARTRFGLLHDKGRDGDIQDGSGSFSNVRPDFVGEXXXXXXXXXXXXXXXXXXXXXXX 708
V R + RDG + S S+V + G+
Sbjct: 166 HVSDSERHPKMSSGSRDGRTRSAH-SLSSVLSQYRGDDDTDFPGSEATSGSKRWGNVADV 224
Query: 709 XXXXXXXXXXXXXNTTAAARLPQRSRKSANGGFFSNKSFENLGCSPYMVQSLKDLQFIRP 888
N PQR + +GGFFS +SF+ +GCS M+ +L++ F RP
Sbjct: 225 TYGRQNQKQREPLN------FPQR-KGPLDGGFFSRRSFKEIGCSDEMLGALRNFDFPRP 277
Query: 889 SHIQAMAYGPVLEGKSCIIADQSGSGKTLAYLAPTIQRLRQEELAGLHKSSARSPRVIIL 1068
SHIQAMAYGP+LEG+SC++ADQSGSGKTLAYL P IQ LR EE+ GLHKSS R+PRVI+L
Sbjct: 278 SHIQAMAYGPILEGRSCVVADQSGSGKTLAYLCPIIQNLRNEEVQGLHKSSPRNPRVIVL 337
Query: 1069 APTAELASQVLNNCRSISKVGVPFRSMVATGGFRQKTQLDNL 1194
PTAELASQVLNNCR ISK GVPFRSMVATGGFRQKTQL++L
Sbjct: 338 TPTAELASQVLNNCRLISKSGVPFRSMVATGGFRQKTQLESL 379
>emb|CBI26041.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 237 bits (604), Expect = 5e-60
Identities = 154/359 (42%), Positives = 186/359 (51%), Gaps = 17/359 (4%)
Frame = +1
Query: 172 RRNGRKLPVCRLAYKRIPMDTPGAYQLIDEHTGEKFIVWXXXXXXXXXXIPSEQVLSWKP 351
R K+ + Y R MDTPGAYQLID+ TGEKFIVW IPS+ VLSW P
Sbjct: 35 RSRKSKVMLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPP--IPSKDVLSWNP 92
Query: 352 ----------------EAVKSSDSLVDDDRVARSLTG-FSKLKASKIRGLVIKRSSGTRT 480
E + V + +TG F +LKA +++ L T+T
Sbjct: 93 VDNNTPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALT------TKT 146
Query: 481 LNCKENAPATYQEEPDFVRARTRFGLLHDKGRDGDIQDGSGSFSNVRPDFVGEXXXXXXX 660
K R + + DK DI G FS ++
Sbjct: 147 SKAK--------------RELNEYKIHSDKTVKRDI----GKFSELQITPEKPHRSDNKI 188
Query: 661 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTAAARLPQRSRKSANGGFFSNKSFENLGC 840
TT + + A+ FFS KSF +LGC
Sbjct: 189 AGADVLVPRVSTANLQGWGYGETMRNFEFETTNIPKRRGKGNSLADSDFFSGKSFRDLGC 248
Query: 841 SPYMVQSLKDLQFIRPSHIQAMAYGPVLEGKSCIIADQSGSGKTLAYLAPTIQRLRQEEL 1020
S YM++SL+ F+RPSHIQAMA+ V+EGKSCIIADQSGSGKTLAYL P IQRLR+EEL
Sbjct: 249 SDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTLAYLLPVIQRLREEEL 308
Query: 1021 AGLHKSSARSPRVIILAPTAELASQVLNNCRSISKVGVPFRSMVATGGFRQKTQLDNLQ 1197
GL KSSA P+V+IL PTAELASQVL+NCRSISK G PFRSM ATGGFRQ+TQL+NLQ
Sbjct: 309 QGLGKSSAGCPQVVILVPTAELASQVLSNCRSISKFGAPFRSMAATGGFRQRTQLENLQ 367
>ref|NP_001048702.1| Os03g0108600 [Oryza sativa Japonica Group]
gi|113547173|dbj|BAF10616.1| Os03g0108600, partial [Oryza
sativa Japonica Group]
Length = 653
Score = 236 bits (601), Expect = 1e-59
Identities = 146/337 (43%), Positives = 191/337 (56%), Gaps = 9/337 (2%)
Frame = +1
Query: 211 YKRIPMDTPGAYQLIDEHTGEKFIVWXXXXXXXXXXIPSEQVLSWKPEAVKSSDSLVDDD 390
Y+R+PMDTPGAY+L+D TG IVW +PS VLS + D ++
Sbjct: 66 YERVPMDTPGAYRLVDRATGRSVIVWGGTDDVS---MPSPAVLS---TTTRVPDRPKENG 119
Query: 391 RVARSLTGFSKLKASKIRGLVIKRSSGTRTLNCKENAPATYQEEPD---------FVRAR 543
R + S+ F +LKA K++ L +RS+ + + + + + E P F R R
Sbjct: 120 R-STSIGNFGRLKAQKVKVLA-RRSAHLKREDSGRISTSRFSESPSDESDEDGTYFERDR 177
Query: 544 TRFGLLHDKGRDGDIQDGSGSFSNVRPDFVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 723
R + + RD D G+ S ++V + G
Sbjct: 178 ARNTRQNSRSRD-DKTRGAHSLNSVLRQYRGADDLDFPGSEATSGSKRWGNI-------- 228
Query: 724 XXXXXXXXNTTAAARLPQRSRKSANGGFFSNKSFENLGCSPYMVQSLKDLQFIRPSHIQA 903
+ R QR + + GFFS +SF+ +GCS ++ +L+ F RPSHIQA
Sbjct: 229 --------SDVTFGRQNQRQKGPLDSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQA 280
Query: 904 MAYGPVLEGKSCIIADQSGSGKTLAYLAPTIQRLRQEELAGLHKSSARSPRVIILAPTAE 1083
MAY PVLEGKSCII DQSGSGKTLAYL P +Q LR+EE+ GLH+SS R+PRV++L PTAE
Sbjct: 281 MAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAE 340
Query: 1084 LASQVLNNCRSISKVGVPFRSMVATGGFRQKTQLDNL 1194
LASQVLNNCRSISK GVPFRSMVATGGFRQKTQL++L
Sbjct: 341 LASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESL 377