BLASTX nr result

ID: Dioscorea21_contig00009184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009184
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19230.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002283927.2| PREDICTED: transport inhibitor response 1-li...   161   6e-38
ref|XP_002302328.1| f-box family protein [Populus trichocarpa] g...   160   8e-38
ref|XP_002306554.1| f-box family protein [Populus trichocarpa] g...   159   2e-37
gb|AAK16647.1|AF139835_1 F-box containing protein TIR1 [Populus ...   157   8e-37

>emb|CBI19230.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/99 (73%), Positives = 90/99 (90%)
 Frame = -1

Query: 312 YIGKYGKLVRTLSVAFAGNTDLGLRYVLEGCPKLQKLEIRDSPFGDLGLLSGIPHYYHMR 133
           YIGKYGKLVRTLSVAFAG++D+GL+YVLEGCPKLQKLEIRDSPFGD  L SG+ HYY+MR
Sbjct: 430 YIGKYGKLVRTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMR 489

Query: 132 FLWMSACKLSLRGCREVAQRLPNLVVEVIGDKDQEDEDG 16
           FLWMS+C+LS +GC E+A+ +P LVVEVI ++++ED+DG
Sbjct: 490 FLWMSSCRLSRQGCEEIARAMPGLVVEVIRNENEEDKDG 528


>ref|XP_002283927.2| PREDICTED: transport inhibitor response 1-like protein [Vitis
           vinifera] gi|147845617|emb|CAN80598.1| hypothetical
           protein VITISV_002642 [Vitis vinifera]
          Length = 601

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/99 (73%), Positives = 90/99 (90%)
 Frame = -1

Query: 312 YIGKYGKLVRTLSVAFAGNTDLGLRYVLEGCPKLQKLEIRDSPFGDLGLLSGIPHYYHMR 133
           YIGKYGKLVRTLSVAFAG++D+GL+YVLEGCPKLQKLEIRDSPFGD  L SG+ HYY+MR
Sbjct: 479 YIGKYGKLVRTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMR 538

Query: 132 FLWMSACKLSLRGCREVAQRLPNLVVEVIGDKDQEDEDG 16
           FLWMS+C+LS +GC E+A+ +P LVVEVI ++++ED+DG
Sbjct: 539 FLWMSSCRLSRQGCEEIARAMPGLVVEVIRNENEEDKDG 577


>ref|XP_002302328.1| f-box family protein [Populus trichocarpa]
           gi|222844054|gb|EEE81601.1| f-box family protein
           [Populus trichocarpa]
          Length = 635

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/98 (76%), Positives = 88/98 (89%)
 Frame = -1

Query: 312 YIGKYGKLVRTLSVAFAGNTDLGLRYVLEGCPKLQKLEIRDSPFGDLGLLSGIPHYYHMR 133
           YIGKYGK+VRTLSVAFAG++D+GL+YVLEGCPKLQKLEIRDSPFGD  LLSG+ HYY+MR
Sbjct: 512 YIGKYGKIVRTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDSPFGDAALLSGLHHYYNMR 571

Query: 132 FLWMSACKLSLRGCREVAQRLPNLVVEVIGDKDQEDED 19
           FLWMSACKLS +GC+++AQ LP+LVVEVI  +D  D D
Sbjct: 572 FLWMSACKLSHQGCQQIAQALPHLVVEVIKHEDNVDMD 609


>ref|XP_002306554.1| f-box family protein [Populus trichocarpa]
           gi|222856003|gb|EEE93550.1| f-box family protein
           [Populus trichocarpa]
          Length = 635

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/98 (75%), Positives = 87/98 (88%)
 Frame = -1

Query: 312 YIGKYGKLVRTLSVAFAGNTDLGLRYVLEGCPKLQKLEIRDSPFGDLGLLSGIPHYYHMR 133
           YIGKYGK+VRTLSVAFAG++D+GL+YVLEGCP+LQKLEIRDSPFGD  LLSG+ HYY+MR
Sbjct: 512 YIGKYGKIVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMR 571

Query: 132 FLWMSACKLSLRGCREVAQRLPNLVVEVIGDKDQEDED 19
           FLWMSACKLS +GC+++AQ LP LVVEVI  +D  D D
Sbjct: 572 FLWMSACKLSRQGCQQIAQALPRLVVEVIKHEDNVDVD 609


>gb|AAK16647.1|AF139835_1 F-box containing protein TIR1 [Populus tremula x Populus
           tremuloides]
          Length = 635

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/98 (74%), Positives = 85/98 (86%)
 Frame = -1

Query: 312 YIGKYGKLVRTLSVAFAGNTDLGLRYVLEGCPKLQKLEIRDSPFGDLGLLSGIPHYYHMR 133
           YIGKYGK+VRTLSVAFAG++D+GL+YVLEGCP+LQKLEIRDSPFGD  LLSG+ HYY+MR
Sbjct: 512 YIGKYGKIVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMR 571

Query: 132 FLWMSACKLSLRGCREVAQRLPNLVVEVIGDKDQEDED 19
           FLWMSACKLS +GC+++ Q LP LVVEVI   D  D D
Sbjct: 572 FLWMSACKLSRQGCQQITQALPRLVVEVIKHDDNVDMD 609


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