BLASTX nr result

ID: Dioscorea21_contig00009146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009146
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...   131   8e-29
ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like...   127   2e-27
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici...   127   2e-27
ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like...   126   3e-27
ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like...   126   3e-27

>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  131 bits (330), Expect = 8e-29
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = -2

Query: 601 GISPGGDEAGVTKDDKKQEKTVFELKLETFEAASKIKVIKEVRGFTNLGLKEAKELVEKT 422
           G++     A   K++KK EKTVFELKLE+FEAASKIKVIKEVR FT+LGLKEAK+LVEKT
Sbjct: 127 GMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLKEAKDLVEKT 186

Query: 421 PVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 332
           P V+K GVSKEEG+QIIEKMKA+GAKVVLE
Sbjct: 187 PSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 217

 Score =  127 bits (319), Expect = 2e-27
 Identities = 63/78 (80%), Positives = 75/78 (96%)
 Frame = -2

Query: 565 KDDKKQEKTVFELKLETFEAASKIKVIKEVRGFTNLGLKEAKELVEKTPVVIKGGVSKEE 386
           K+++K EKTVFELKLE++EAASKIK+IKEVRGFT+LGLKEAK+LVEKTP VIK GVSKEE
Sbjct: 140 KEEQKPEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEAKDLVEKTPAVIKKGVSKEE 199

Query: 385 GQQIIEKMKAVGAKVVLE 332
           G+QIIEK+KA+GAKVV+E
Sbjct: 200 GEQIIEKLKALGAKVVME 217


>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223526735|gb|EEF28965.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 301

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/82 (76%), Positives = 74/82 (90%)
 Frame = -2

Query: 577 AGVTKDDKKQEKTVFELKLETFEAASKIKVIKEVRGFTNLGLKEAKELVEKTPVVIKGGV 398
           A   K++KK EKTVFELKLE++EAASKIK+IKEVR FT+LGLKEAK+LVEKTP ++K GV
Sbjct: 220 AAAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKTPSILKAGV 279

Query: 397 SKEEGQQIIEKMKAVGAKVVLE 332
           SKEE +QIIEKMKAVGAKVV+E
Sbjct: 280 SKEEAEQIIEKMKAVGAKVVME 301


>ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  126 bits (316), Expect = 3e-27
 Identities = 64/90 (71%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = -2

Query: 598 ISPGGDEAG-VTKDDKKQEKTVFELKLETFEAASKIKVIKEVRGFTNLGLKEAKELVEKT 422
           +S GG +A    K++KK EKTVFELKLE++EAASKIK+IKEVR FT+LGLKEAK+LVEK 
Sbjct: 117 VSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKA 176

Query: 421 PVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 332
           P V+K GVSKEEG+Q++EK+KA+GAKVVLE
Sbjct: 177 PSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


>ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  126 bits (316), Expect = 3e-27
 Identities = 64/90 (71%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = -2

Query: 598 ISPGGDEAG-VTKDDKKQEKTVFELKLETFEAASKIKVIKEVRGFTNLGLKEAKELVEKT 422
           +S GG +A    K++KK EKTVFELKLE++EAASKIK+IKEVR FT+LGLKEAK+LVEK 
Sbjct: 117 VSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKA 176

Query: 421 PVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 332
           P V+K GVSKEEG+Q++EK+KA+GAKVVLE
Sbjct: 177 PSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


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