BLASTX nr result

ID: Dioscorea21_contig00009106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009106
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601721.1| hypothetical protein MTR_3g084700 [Medicago ...    65   5e-09
ref|XP_003601720.1| F-box domain containing protein [Medicago tr...    63   3e-08
ref|XP_003589016.1| hypothetical protein MTR_1g016400 [Medicago ...    62   4e-08

>ref|XP_003601721.1| hypothetical protein MTR_3g084700 [Medicago truncatula]
           gi|355490769|gb|AES71972.1| hypothetical protein
           MTR_3g084700 [Medicago truncatula]
          Length = 314

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
 Frame = -1

Query: 453 DKSLCLIQYIKSRAVVIWVMESPVSRGSWMKVYEVDLVSLGLGDVHQTLDSFTMINSKLL 274
           + S+CL+Q +++    +W ++   S GSW KV +V + +LGL + +  +  F ++N  LL
Sbjct: 203 NSSICLVQ-LRNSVFTVWFIKDYES-GSWKKVLKVRVRALGLNETNPNVRKFMVMNGSLL 260

Query: 273 VFTVQDCLYTYGLKDKQMNKLGE---HNQGLYPQLRPYANTFHPCG 145
           VF  +  LY+YGL+ +    L E   HN    P+   Y++T   CG
Sbjct: 261 VFATEQKLYSYGLEGESYMMLEEICGHNYAFNPRFISYSDTLRSCG 306


>ref|XP_003601720.1| F-box domain containing protein [Medicago truncatula]
           gi|355490768|gb|AES71971.1| F-box domain containing
           protein [Medicago truncatula]
          Length = 514

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
 Frame = -1

Query: 543 EKRTSEFMSLPEEAQKIGIDNYRIQVAPWTDK-----SLCLIQYIKSRAVVIWVMESPVS 379
           E   S  + LP EA K   +   + +  W  K     S+CL++  KS    IWV++   S
Sbjct: 239 ENGISTMLKLPREAIKGCHNMCTMGIFNWGKKTSYNSSICLVKLSKS-VFTIWVLKDYES 297

Query: 378 RGSWMKVYEVDLVSLGLGDVHQTLDSFTMINSKLLVFTVQDCLYTYGL---KDKQMNKLG 208
            GSW KV +V + +LGL +    +  F ++N  LL+F  ++ +Y+ GL   +   + ++ 
Sbjct: 298 -GSWQKVLKVRVRALGLKEKDPNVRGFMVMNGDLLIFATEEKVYSCGLDCERYMMVEEIC 356

Query: 207 EHNQGLYPQLRPYANTFHPC 148
           +H+ G YP+   Y++T   C
Sbjct: 357 QHSCGFYPRFISYSDTLRLC 376


>ref|XP_003589016.1| hypothetical protein MTR_1g016400 [Medicago truncatula]
           gi|355478064|gb|AES59267.1| hypothetical protein
           MTR_1g016400 [Medicago truncatula]
          Length = 385

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
 Frame = -1

Query: 543 EKRTSEFMSLPEEAQKIGIDNYRIQVAPW-----TDKSLCLIQYIKSRAVVIWVMESPVS 379
           E   S  + LP EA +       + +  W     + +S+CL++  KS    +W ++   S
Sbjct: 240 ENGNSTMLRLPREAIRGCHTMTNMGIFNWGKVSSSKRSICLVKVRKS-VFTVWYLKDYES 298

Query: 378 RGSWMKVYEVDLVSLGLGDVHQTLDSFTMINSKLLVFTVQDCLYTYGLKDKQ---MNKLG 208
             SW KV +V +  LGL + +  +  FT+ N  +LVF  ++ +Y+ GL +++   + ++G
Sbjct: 299 -SSWQKVLKVRVRGLGLQEKNPQVTGFTVTNGDILVFATEEKVYSCGLNEERFMMVEEIG 357

Query: 207 EHNQGLYPQLRPYANTFHPCG 145
           +HN     +L  Y++TF  CG
Sbjct: 358 QHNCRFNLRLISYSDTFRSCG 378


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