BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009089
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580198.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   167   2e-39
gb|ACN25943.1| unknown [Zea mays] gi|413919011|gb|AFW58943.1| pu...   166   7e-39
ref|NP_001152715.1| ring domain containing protein [Zea mays] gi...   166   7e-39
ref|NP_001130966.1| uncharacterized LOC100192071 [Zea mays] gi|1...   165   1e-38
gb|AFW72516.1| putative RING zinc finger domain superfamily prot...   156   4e-36

>ref|XP_003580198.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Brachypodium
           distachyon]
          Length = 259

 Score =  167 bits (424), Expect = 2e-39
 Identities = 100/229 (43%), Positives = 126/229 (55%), Gaps = 23/229 (10%)
 Frame = +2

Query: 5   MNQASAGGCFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQVQA--------AEVEQQCP 160
           M  A+  G FDCNICLDFA DPVVTLCGHLYCWPCIY+WLQ  A        +   QQCP
Sbjct: 33  MPAAAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLQPAAESASSNNRSSARQQCP 92

Query: 161 VCKAALSENTLVPLYGRGHYTTDGKQSNSQVPQRRPAVQYDNSDIXXXXXXXXXXXXXYL 340
           VCKA LS ++LVPLYGRG   +  K  +     RRP V  +N++               +
Sbjct: 93  VCKATLSADSLVPLYGRG--GSSKKSLDGMAIPRRPMVHRENAEHHHTQSNIDDRHHQNM 150

Query: 341 ESH---IDTSNDNLHSGSVE-----------NRVINSIAGDVLGGIASAVVPWALRGR-A 475
           E         + + HSG+ E             +I+S AG VLGG+A AV+P A RG+  
Sbjct: 151 EPRPLLRPLRHAHHHSGATEFDFIHPPSPLGRGLIHSTAGGVLGGMAEAVLPSAFRGQLP 210

Query: 476 PGMYNLSMNHQTGNVGDFRLRQHEMESERSLYQIWIFLSCCALLCLILF 622
           P MY  S  +   +    RLR+ +ME ERSL+ IW FL    +LCL+LF
Sbjct: 211 PSMYYTSPYYIAAHNMGPRLRRQQMEVERSLHHIWFFLFVFVVLCLLLF 259


>gb|ACN25943.1| unknown [Zea mays] gi|413919011|gb|AFW58943.1| putative RING zinc
           finger domain superfamily protein isoform 1 [Zea mays]
           gi|413919012|gb|AFW58944.1| putative RING zinc finger
           domain superfamily protein isoform 2 [Zea mays]
          Length = 261

 Score =  166 bits (419), Expect = 7e-39
 Identities = 95/226 (42%), Positives = 124/226 (54%), Gaps = 24/226 (10%)
 Frame = +2

Query: 17  SAGGCFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQV--------QAAEVEQQCPVCKA 172
           +  GCFDCNICLDFA +PVVTLCGHLYCWPCIY+WL+           +   +QCPVCKA
Sbjct: 38  TGSGCFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASDNGSSARRQCPVCKA 97

Query: 173 ALSENTLVPLYGRGHYTTDGKQSNSQVPQRRPAVQYD-----------NSDIXXXXXXXX 319
            LS +TLVPLYGRG   +  K  +     RRP V  +           N           
Sbjct: 98  TLSPDTLVPLYGRGG--SSKKSLDGMAIPRRPMVHREAVEQQNARSHVNDQHYHQSTGDS 155

Query: 320 XXXXXYLESH---IDTSNDNLHSGSVENR-VINSIAGDVLGGIASAVVPWALRGRAPG-M 484
                 +++H   +    D ++  +   R +I+S AG VLGG+A  V+PW LRG+ P  +
Sbjct: 156 PQHQPLMQAHHHPVPPGFDFIYPPAPVGRGLIHSTAGGVLGGMAEVVLPWVLRGQLPASL 215

Query: 485 YNLSMNHQTGNVGDFRLRQHEMESERSLYQIWIFLSCCALLCLILF 622
           +  S  H      + RLR+ +ME ERSL+QIW FL    LLCL+LF
Sbjct: 216 HYTSPYHVAAQNVNPRLRRQQMEIERSLHQIWFFLFVFVLLCLLLF 261


>ref|NP_001152715.1| ring domain containing protein [Zea mays]
           gi|195659279|gb|ACG49107.1| ring domain containing
           protein [Zea mays]
          Length = 256

 Score =  166 bits (419), Expect = 7e-39
 Identities = 95/226 (42%), Positives = 124/226 (54%), Gaps = 24/226 (10%)
 Frame = +2

Query: 17  SAGGCFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQV--------QAAEVEQQCPVCKA 172
           +  GCFDCNICLDFA +PVVTLCGHLYCWPCIY+WL+           +   +QCPVCKA
Sbjct: 33  TGSGCFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASDNGSSARRQCPVCKA 92

Query: 173 ALSENTLVPLYGRGHYTTDGKQSNSQVPQRRPAVQYD-----------NSDIXXXXXXXX 319
            LS +TLVPLYGRG   +  K  +     RRP V  +           N           
Sbjct: 93  TLSPDTLVPLYGRGG--SSKKSLDGMAIPRRPMVHREAVEQQNARSHVNDQHYHQSTGDS 150

Query: 320 XXXXXYLESH---IDTSNDNLHSGSVENR-VINSIAGDVLGGIASAVVPWALRGRAPG-M 484
                 +++H   +    D ++  +   R +I+S AG VLGG+A  V+PW LRG+ P  +
Sbjct: 151 PQHQPLMQAHHHPVPPGFDFIYPPAPVGRGLIHSTAGGVLGGMAEVVLPWVLRGQLPASL 210

Query: 485 YNLSMNHQTGNVGDFRLRQHEMESERSLYQIWIFLSCCALLCLILF 622
           +  S  H      + RLR+ +ME ERSL+QIW FL    LLCL+LF
Sbjct: 211 HYTSPYHVAAQNVNPRLRRQQMEIERSLHQIWFFLFVFVLLCLLLF 256


>ref|NP_001130966.1| uncharacterized LOC100192071 [Zea mays] gi|194690576|gb|ACF79372.1|
           unknown [Zea mays] gi|195626014|gb|ACG34837.1| ring
           domain containing protein [Zea mays]
           gi|238013336|gb|ACR37703.1| unknown [Zea mays]
           gi|414586142|tpg|DAA36713.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 261

 Score =  165 bits (417), Expect = 1e-38
 Identities = 97/232 (41%), Positives = 127/232 (54%), Gaps = 25/232 (10%)
 Frame = +2

Query: 2   NMNQASAGGCFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQV--------QAAEVEQQC 157
           +M   +  GCF+CNICLDFA +PVVT CGHLYCWPCIY+WL+          ++   +QC
Sbjct: 32  DMPATTGSGCFECNICLDFASEPVVTFCGHLYCWPCIYEWLRPGVESAASDNSSSARRQC 91

Query: 158 PVCKAALSENTLVPLYGRGHYTTDGKQSNSQVPQRRPAVQYD------------NSDIXX 301
           PVCKA LS +TLVPLYGRG      K  +     RRP V  +            N     
Sbjct: 92  PVCKATLSTDTLVPLYGRG--GNSKKSLDGMAIPRRPMVHRETVEEQQNAQSNVNDQHYH 149

Query: 302 XXXXXXXXXXXYLESH---IDTSNDNLHSGSVENR-VINSIAGDVLGGIASAVVPWALRG 469
                       L++H   I T  D ++  +   R +I+S AG VLGG+A  V+P ALRG
Sbjct: 150 QSMEDNSQRQPLLQAHHHPIPTGFDFIYPPAPVGRGLIHSTAGGVLGGMAEIVLPLALRG 209

Query: 470 RAP-GMYNLSMNHQTGNVGDFRLRQHEMESERSLYQIWIFLSCCALLCLILF 622
           + P  +Y  +  H      + RLR+H+ME ERSL+QIW FL    +LCL+LF
Sbjct: 210 QMPASLYYTNPYHAATQNVNPRLRRHQMEIERSLHQIWFFLCVFVVLCLLLF 261


>gb|AFW72516.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 255

 Score =  156 bits (395), Expect = 4e-36
 Identities = 98/230 (42%), Positives = 121/230 (52%), Gaps = 28/230 (12%)
 Frame = +2

Query: 17  SAGGCFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQVQAAE------VEQQCPVCKAAL 178
           S  GCFDCNICL+ A +PVVTLCGHLYCWPCIY+WL+   AE        +QCPVCKAA+
Sbjct: 37  SGSGCFDCNICLECATEPVVTLCGHLYCWPCIYEWLRHDVAEAGARSSARRQCPVCKAAV 96

Query: 179 SENTLVPLYGRGHYTTDGKQSNSQVPQRRPAVQYDNSDIXXXXXXXXXXXXXYLESHIDT 358
           S + LVPLYGRG  ++  K   S    RRPA++    D              +   H +T
Sbjct: 97  SPDALVPLYGRGGSSSAKKPLASIPRPRRPALRQSTHD-------SGSGGHHHHHRHAET 149

Query: 359 SN----------------DNLHSGSVENRVI----NSIAGDVLGGIASAVVPWALRG--R 472
           S                 D L S    +R +     S  G +LGG+A AV+P  LRG  R
Sbjct: 150 STPARSLRHPAHAHAAQFDALLSAPFGDRGMLHSTTSTTGGMLGGMAVAVLPLVLRGQAR 209

Query: 473 APGMYNLSMNHQTGNVGDFRLRQHEMESERSLYQIWIFLSCCALLCLILF 622
            PGMY  S  H        R R+  +E ERSL+QIW FL    +LCL+LF
Sbjct: 210 VPGMYYPSPYHLMSP----RQRRWHVEVERSLHQIWFFLCVFVVLCLLLF 255