BLASTX nr result

ID: Dioscorea21_contig00009083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009083
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW82782.1| hypothetical protein ZEAMMB73_481254 [Zea mays]        123   2e-26
ref|NP_001132052.1| uncharacterized protein LOC100193464 [Zea ma...   123   2e-26
ref|XP_002440505.1| hypothetical protein SORBIDRAFT_09g002090 [S...   121   8e-26
ref|NP_001054500.1| Os05g0121700 [Oryza sativa Japonica Group] g...   118   7e-25
ref|XP_003566651.1| PREDICTED: DNA repair protein RAD51 homolog ...   115   6e-24

>gb|AFW82782.1| hypothetical protein ZEAMMB73_481254 [Zea mays]
          Length = 390

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/115 (55%), Positives = 89/115 (77%), Gaps = 3/115 (2%)
 Frame = +2

Query: 200 ELFRSSML--QMAGRIVVLRPTSLSEFTQSLEKIKLSLVQREVNLLLIDSMDGLISGNPR 373
           ++FR   L  +MAGRI+V+RPTSL++FT+SLE++K++L+Q +V LL++DS+  L+S    
Sbjct: 162 QIFRQEGLAQKMAGRILVMRPTSLADFTKSLEEMKVTLLQHDVKLLIVDSVAALMS---M 218

Query: 374 ENESCTRGSRQQPLGWTLSFMKSVAEFSRIPIVVTNQVRGQST-EAFHYPFEGQR 535
           ENE  T G RQ PL W+LSF+KS+AEFSRIP+VVTNQVR QS  + +H+ FE  R
Sbjct: 219 ENEKATAGFRQHPLRWSLSFLKSIAEFSRIPVVVTNQVRSQSNDDGYHFSFEVDR 273


>ref|NP_001132052.1| uncharacterized protein LOC100193464 [Zea mays]
           gi|194693306|gb|ACF80737.1| unknown [Zea mays]
          Length = 363

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/115 (55%), Positives = 89/115 (77%), Gaps = 3/115 (2%)
 Frame = +2

Query: 200 ELFRSSML--QMAGRIVVLRPTSLSEFTQSLEKIKLSLVQREVNLLLIDSMDGLISGNPR 373
           ++FR   L  +MAGRI+V+RPTSL++FT+SLE++K++L+Q +V LL++DS+  L+S    
Sbjct: 162 QIFRQEGLAQKMAGRILVMRPTSLADFTKSLEEMKVTLLQHDVKLLIVDSVAALMS---M 218

Query: 374 ENESCTRGSRQQPLGWTLSFMKSVAEFSRIPIVVTNQVRGQST-EAFHYPFEGQR 535
           ENE  T G RQ PL W+LSF+KS+AEFSRIP+VVTNQVR QS  + +H+ FE  R
Sbjct: 219 ENEKATAGFRQHPLRWSLSFLKSIAEFSRIPVVVTNQVRSQSNDDGYHFSFEVDR 273


>ref|XP_002440505.1| hypothetical protein SORBIDRAFT_09g002090 [Sorghum bicolor]
           gi|241945790|gb|EES18935.1| hypothetical protein
           SORBIDRAFT_09g002090 [Sorghum bicolor]
          Length = 364

 Score =  121 bits (303), Expect = 8e-26
 Identities = 63/112 (56%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = +2

Query: 200 ELFRSSML--QMAGRIVVLRPTSLSEFTQSLEKIKLSLVQREVNLLLIDSMDGLISGNPR 373
           ++FR   L  +MAGRI+V+RPT+L++FT+SLE++K++L+Q +V LL++DSM  L+S    
Sbjct: 162 QIFRQEGLAQKMAGRILVIRPTTLADFTKSLEEMKVTLLQHDVKLLIVDSMAALMS---L 218

Query: 374 ENESCTRGSRQQPLGWTLSFMKSVAEFSRIPIVVTNQVRGQST-EAFHYPFE 526
           ENE  T G  Q PL WTLSF+KS+AEFSRIP+VVTNQVR QS  + +H+ FE
Sbjct: 219 ENEKVTAGFSQHPLRWTLSFLKSIAEFSRIPVVVTNQVRSQSNDDGYHFSFE 270


>ref|NP_001054500.1| Os05g0121700 [Oryza sativa Japonica Group]
           gi|54287477|gb|AAV31221.1| putative DNA repair protein
           RAD51 [Oryza sativa Japonica Group]
           gi|113578051|dbj|BAF16414.1| Os05g0121700 [Oryza sativa
           Japonica Group] gi|215741250|dbj|BAG97745.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215741600|dbj|BAG98095.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195995|gb|EEC78422.1| hypothetical protein
           OsI_18249 [Oryza sativa Indica Group]
           gi|222630019|gb|EEE62151.1| hypothetical protein
           OsJ_16938 [Oryza sativa Japonica Group]
          Length = 363

 Score =  118 bits (295), Expect = 7e-25
 Identities = 64/115 (55%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = +2

Query: 200 ELFRSSML--QMAGRIVVLRPTSLSEFTQSLEKIKLSLVQREVNLLLIDSMDGLISGNPR 373
           ++FR   L  +MAGRI+VLRPTSLSEFT+SLE++K++L+Q +V LL++DSM  L+S    
Sbjct: 161 QIFRQEGLAQKMAGRILVLRPTSLSEFTKSLEQMKVTLLQHDVKLLVVDSMAALMSS--- 217

Query: 374 ENESCTRGSRQQPLGWTLSFMKSVAEFSRIPIVVTNQVRGQST-EAFHYPFEGQR 535
           E E    G RQ PL W LSF+KS+AEFS+IP+VVTNQVR QS  + + Y FE ++
Sbjct: 218 EIEKSATGLRQHPLRWALSFLKSIAEFSQIPVVVTNQVRSQSNDDGYRYSFEVEK 272


>ref|XP_003566651.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Brachypodium
           distachyon]
          Length = 364

 Score =  115 bits (287), Expect = 6e-24
 Identities = 61/112 (54%), Positives = 83/112 (74%), Gaps = 3/112 (2%)
 Frame = +2

Query: 200 ELFRSSML--QMAGRIVVLRPTSLSEFTQSLEKIKLSLVQREVNLLLIDSMDGLISGNPR 373
           ++FR   L  +M GRI+V+RPTSLS+FT+SLE++K++L+Q +V LL++DSM  L+S    
Sbjct: 162 QIFRQEGLAQKMTGRILVMRPTSLSDFTKSLEQMKVTLLQNDVKLLIVDSMAALMS---T 218

Query: 374 ENESCTRGSRQQPLGWTLSFMKSVAEFSRIPIVVTNQVRGQS-TEAFHYPFE 526
           ENE       Q PL W LSF+KS+AEFSRIP++VTNQVR QS  + +HY FE
Sbjct: 219 ENERGASDRTQHPLRWALSFLKSIAEFSRIPVIVTNQVRSQSKDDGYHYLFE 270


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