BLASTX nr result

ID: Dioscorea21_contig00009078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009078
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270042.1| PREDICTED: LRR receptor-like serine/threonin...   115   3e-24
ref|XP_002450813.1| hypothetical protein SORBIDRAFT_05g018970 [S...   115   4e-24
ref|XP_002268910.2| PREDICTED: LRR receptor-like serine/threonin...   115   5e-24
emb|CAN72773.1| hypothetical protein VITISV_015942 [Vitis vinifera]   115   5e-24
emb|CBI18489.3| unnamed protein product [Vitis vinifera]              112   4e-23

>ref|XP_002270042.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1024

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
 Frame = -3

Query: 448 GILPKSMGKLCKLQELDLSSNLINGAI-DDFVNSLSNCPENKKSIRNSYFS-----VYTD 287
           G +PKS+  LC LQEL+L  N ++G +  DFV   ++  E      N +       +   
Sbjct: 377 GEIPKSLSNLCNLQELELDRNNLSGQLAPDFVACANDTLETLFLSDNQFSGSVPALIGFS 436

Query: 286 GMLILNVGSNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYNL 107
            +  L++  N+ NGT+PES+G+LANL++L +  NS  GT++E H  NL+ LSY++ S N 
Sbjct: 437 SLRELHLDFNQLNGTLPESVGQLANLQSLDIASNSLQGTISEAHLFNLSWLSYLNLSSNS 496

Query: 106 LQLNVPNDWVPPFHADAIMMCSCRIGSVFPAWLKT 2
           L  N+  DWVPPF   ++ + SC++G  FP+WL+T
Sbjct: 497 LTFNMSLDWVPPFQLLSLRLASCKLGPRFPSWLRT 531


>ref|XP_002450813.1| hypothetical protein SORBIDRAFT_05g018970 [Sorghum bicolor]
           gi|241936656|gb|EES09801.1| hypothetical protein
           SORBIDRAFT_05g018970 [Sorghum bicolor]
          Length = 621

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
 Frame = -3

Query: 448 GILPKSMGKLCKLQELDLSSNLINGAIDDFVNSLSNCPENKKSIRN------SYFSVYTD 287
           G LP  MG+L  L  LDLS N I+G + D +  L+       +  N      S+   +T 
Sbjct: 380 GTLPNWMGQLTSLGYLDLSQNNISGMLPDSLRMLTGLEYLALTYNNITGPLPSFVGEFT- 438

Query: 286 GMLILNVGSNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYNL 107
           G+  L++  NR  G VP  IG L NL  L L  N+ DGT+TE HFA+L  L ++D SYN 
Sbjct: 439 GLSYLDLSYNRLTGQVPREIGMLRNLENLDLTSNNLDGTITEEHFASLKSLRWLDLSYNS 498

Query: 106 LQLNVPNDWVPPFHADAIMMCSCRIGSVFPAWLK 5
           L++ + ++W PPF        SCR+G  FP+WLK
Sbjct: 499 LKIEISSEWQPPFRLQQADFASCRMGPAFPSWLK 532


>ref|XP_002268910.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO2-like [Vitis vinifera]
          Length = 1198

 Score =  115 bits (287), Expect = 5e-24
 Identities = 63/156 (40%), Positives = 95/156 (60%), Gaps = 7/156 (4%)
 Frame = -3

Query: 448  GILPKSMGKLCKLQELDLSSNLINGAID-DFVNSLSNCPENKKSIRNSYFSVYTDGML-- 278
            G +PKS   LC LQEL+L  N ++G I  DFV   ++  E   S+ ++ FS     ++  
Sbjct: 547  GEIPKSPSNLCNLQELELDRNNLSGQIALDFVACANDTLETL-SLSDNQFSGSVPALIGF 605

Query: 277  ----ILNVGSNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYN 110
                 L++  N+ NGT+PES+G+LANL++L +  NS   T+ E H  NL+ LSY+D S N
Sbjct: 606  SSLRKLHLDFNQLNGTLPESVGQLANLQSLDIASNSLQDTINEAHLFNLSRLSYLDLSSN 665

Query: 109  LLQLNVPNDWVPPFHADAIMMCSCRIGSVFPAWLKT 2
             L  N+  +WVPPF   ++ + SC++G  FP+WL+T
Sbjct: 666  SLTFNMSFEWVPPFQLYSLRLASCKLGPHFPSWLRT 701



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = -3

Query: 448 GILPKSMGKLCKLQELDLSSNLINGAIDDFVNS---LSNCPENKKSIRNSYFSVYTDGML 278
           G +P ++GK+  L  LDLS N + G+I D V     LS+   +   ++ S  +   + +L
Sbjct: 379 GSIPDTVGKMVSLSHLDLSGNQLQGSIPDTVGKMVLLSHLDLSGNQLQGSIPNTVGNMVL 438

Query: 277 ILNVG--SNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYNLL 104
           + + G   N+  G++P+++G++  L  L L  N   G++ +     +  LS++D S N L
Sbjct: 439 LSHFGLSYNQLRGSIPDTVGKMVLLSRLDLSNNQLQGSVPD-TVGKMVLLSHLDLSGNQL 497

Query: 103 QLNVPN 86
           Q +VP+
Sbjct: 498 QGSVPD 503



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
 Frame = -3

Query: 403  LDLSSNLINGAIDDFVNSLSNCPENKKSIRNSYFS-------VYTDGMLILNVGSNRFNG 245
            LDLS+N ++G+I   + ++ N P     + N+  +          + +++LN+ +NRF+G
Sbjct: 778  LDLSNNKLSGSIS-LLCAVVNPPLVLLDLSNNSLTGGLPNCWAQWERLVVLNLENNRFSG 836

Query: 244  TVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYNLLQLNVPNDWV 77
             +P S G L ++RTL L+ N+  G L    F N T L ++D   N L   +P +W+
Sbjct: 837  QIPNSFGSLRSIRTLHLRNNNLTGEL-PLSFKNCTKLRFIDLGKNRLSGKIP-EWI 890


>emb|CAN72773.1| hypothetical protein VITISV_015942 [Vitis vinifera]
          Length = 986

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
 Frame = -3

Query: 448 GILPKSMGKLCKLQELDLSSNLINGAI-DDFVNSLSNCPENKKSIRNSYFS-----VYTD 287
           G +PKS+  LC LQEL+L  N ++G +  DFV   ++  E      N +       +   
Sbjct: 209 GEIPKSLSNLCNLQELELDRNNLSGQLAPDFVACANDTLETLFLSDNQFSGSVPALIGFS 268

Query: 286 GMLILNVGSNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYNL 107
            +  L++  N+ NGT+PES+G+LANL++L +  NS  GT++E H  NL+ LSY++ S N 
Sbjct: 269 SLRELHLDFNKLNGTLPESVGQLANLQSLDIALNSLQGTISEAHLFNLSWLSYLNLSSNS 328

Query: 106 LQLNVPNDWVPPFHADAIMMCSCRIGSVFPAWLKT 2
           L  N+  DWVPPF   ++ + SC++G  FP+WL+T
Sbjct: 329 LTFNMSLDWVPPFQLLSLRLASCKLGPRFPSWLRT 363


>emb|CBI18489.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
 Frame = -3

Query: 451  SGILPKSMGKLCKLQELDLSSNLINGAIDDFVNSLSNCPENKKSIRNSYFSVYTD-GMLI 275
            SG LP S+G+L +L++LD+SSN ++G++ D +  LS     + S  +   S+    G L 
Sbjct: 1035 SGSLPDSIGQLSQLEQLDVSSNHLSGSLPDSIGQLSQLQGLQVSSNHLSGSLPDSIGQLS 1094

Query: 274  ----LNVGSNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLSYMDFSYNL 107
                L+V SN  +G++P+SIG+L+ L  L +  N   G+L+E HF  L+ L Y+    N 
Sbjct: 1095 QLQGLHVSSNHLSGSLPDSIGQLSQLEQLDVSSNHLSGSLSEQHFLKLSKLEYLYMGSNS 1154

Query: 106  LQLNVPNDWVPPFHADAIMMCSCRIGSVFPAWLKT 2
              LNV  +WVP F  D + MCSC +G  FPAWL++
Sbjct: 1155 FHLNVSPNWVPLFQVDELDMCSCHLGPSFPAWLQS 1189



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
 Frame = -3

Query: 448  GILPKSMGKLCKLQELDLSSNLINGAIDDFVNSLSNCPENKKSIRNSYFSVYTDGML--- 278
            G +P S+G  C L+ LDLS NL+NG++ + +  L  C         +  S+Y + ++   
Sbjct: 907  GSIPSSIGNFCNLKYLDLSFNLLNGSLPEIIKGLETCSSKSPLPNLTKLSLYNNQLMGKL 966

Query: 277  -----------ILNVGSNRFNGTVPESIGRLANLRTLLLQENSFDGTLTEHHFANLTDLS 131
                        L++ +N+F G +P S+G L +L  L L EN  +G+L +     L+ + 
Sbjct: 967  PNWLGELKNLKALDLSNNKFEGPIPASLGTLQHLEFLYLLENELNGSLPD-SIGQLSQVQ 1025

Query: 130  YMDFSYNLLQLNVPN 86
            ++    N L  ++P+
Sbjct: 1026 HLIVYSNHLSGSLPD 1040


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