BLASTX nr result

ID: Dioscorea21_contig00009045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009045
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW88523.1| 30S ribosomal protein S1 [Zea mays]                     60   2e-07
ref|XP_003558047.1| PREDICTED: 30S ribosomal protein S1, chlorop...    60   2e-07
gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]         60   2e-07
gb|EEE58946.1| hypothetical protein OsJ_10622 [Oryza sativa Japo...    60   2e-07
ref|NP_001150148.1| LOC100283777 [Zea mays] gi|194703708|gb|ACF8...    60   2e-07

>gb|AFW88523.1| 30S ribosomal protein S1 [Zea mays]
          Length = 401

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -3

Query: 253 KLVFEKADEMAQLFTRRIAQAEAMAREDMLRYQTEEVL 140
           KLVFEKADEMAQ+F +RIAQAEAMAR DMLR+Q E  L
Sbjct: 338 KLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPESGL 375


>ref|XP_003558047.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 401

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -3

Query: 253 KLVFEKADEMAQLFTRRIAQAEAMAREDMLRYQTEEVL 140
           KLVFEKADEMAQ+F +RIAQAEAMAR DMLR+Q E  L
Sbjct: 336 KLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPESGL 373


>gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]
          Length = 415

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -3

Query: 253 KLVFEKADEMAQLFTRRIAQAEAMAREDMLRYQTEEVL 140
           KLVFEKADEMAQ+F +RIAQAEAMAR DMLR+Q E  L
Sbjct: 348 KLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPESGL 385


>gb|EEE58946.1| hypothetical protein OsJ_10622 [Oryza sativa Japonica Group]
          Length = 382

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -3

Query: 253 KLVFEKADEMAQLFTRRIAQAEAMAREDMLRYQTEEVL 140
           KLVFEKADEMAQ+F +RIAQAEAMAR DMLR+Q E  L
Sbjct: 317 KLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPESGL 354


>ref|NP_001150148.1| LOC100283777 [Zea mays] gi|194703708|gb|ACF85938.1| unknown [Zea
           mays] gi|195637122|gb|ACG38029.1| 30S ribosomal protein
           S1 [Zea mays] gi|223948553|gb|ACN28360.1| unknown [Zea
           mays]
          Length = 401

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -3

Query: 253 KLVFEKADEMAQLFTRRIAQAEAMAREDMLRYQTEEVL 140
           KLVFEKADEMAQ+F +RIAQAEAMAR DMLR+Q E  L
Sbjct: 338 KLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPESGL 375


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