BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008993
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   440   e-121
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     308   9e-82
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]                 307   3e-81
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]   288   1e-75
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               287   3e-75

>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  440 bits (1131), Expect = e-121
 Identities = 201/277 (72%), Positives = 240/277 (86%)
 Frame = +3

Query: 6    SRMSALLRSGVLGAVSPPSDVVCFGCKLGKQLQRPYSLSMSQTTAPFELIHSDVWGPAPF 185
            SR++ L+  GVLG+V   +  VC GCKLGKQ+Q PY  S S+++ PF+L+HSDVWG +PF
Sbjct: 335  SRLATLINQGVLGSVPVDTTFVCKGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPF 394

Query: 186  VSKGGHRYYVLFIDDYTRFTWLYFMTNRSQLLSIYRSFSTMIHTQFSASIKIFRSDSGGE 365
             SKGGH YYV+F+DDY+R+TW+YFM +RSQL+SIY+SF+ MIHTQFS++I+IFRSDSGGE
Sbjct: 395  PSKGGHNYYVIFVDDYSRYTWIYFMKHRSQLISIYQSFAQMIHTQFSSAIRIFRSDSGGE 454

Query: 366  YTSHAFRAFLSSEGTLPQLSCPGAHPQNGVAERKHRHILETTRALLLGSFLPPHFWAEAV 545
            Y S+AFR FL S+GTLPQLSCPGAH QNGVAERKHRHI+ET R LL+ SF+P HFWAEA+
Sbjct: 455  YMSNAFREFLVSQGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAEAI 514

Query: 546  STSVYLINLQPSTHLNGCSPGECLHGTPPRYDHLRVFGCRCFVLLSPREKTKLTAQSVSC 725
            ST+VYLIN+QPS+ L G SPGE L G+PPRYDHLRVFGC C+VLL+PRE+TKLTAQSV C
Sbjct: 515  STAVYLINMQPSSSLQGRSPGEVLFGSPPRYDHLRVFGCTCYVLLAPRERTKLTAQSVEC 574

Query: 726  VFLGYSLEHKGYRCYDPVTRRIRISRDVTFDESTPFY 836
            VFLGYSLEHKGYRCYDP  RRIRISRDVTFDE+ PF+
Sbjct: 575  VFLGYSLEHKGYRCYDPSARRIRISRDVTFDENKPFF 611


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  308 bits (790), Expect = 9e-82
 Identities = 143/202 (70%), Positives = 171/202 (84%)
 Frame = +3

Query: 6    SRMSALLRSGVLGAVSPPSDVVCFGCKLGKQLQRPYSLSMSQTTAPFELIHSDVWGPAPF 185
            SR+S L++ GVLG VS  +D VC GCKLGKQ+Q PY  SMS++T+PF L+HSDVWGPAPF
Sbjct: 648  SRLSTLVQQGVLGNVSIETDFVCKGCKLGKQVQLPYRSSMSRSTSPFALVHSDVWGPAPF 707

Query: 186  VSKGGHRYYVLFIDDYTRFTWLYFMTNRSQLLSIYRSFSTMIHTQFSASIKIFRSDSGGE 365
             SKGGHRYYV+F+DD++R+TW+YFM +RS+L  +Y+SF++M+HTQFS SIK FRSDSGGE
Sbjct: 708  HSKGGHRYYVIFVDDFSRYTWIYFMKHRSELYQVYKSFASMVHTQFSTSIKNFRSDSGGE 767

Query: 366  YTSHAFRAFLSSEGTLPQLSCPGAHPQNGVAERKHRHILETTRALLLGSFLPPHFWAEAV 545
            Y S+AFR  LS  GTLPQLSCPGAH QNGVAERKHRHI+ET R LL+ S +PPHFWAEAV
Sbjct: 768  YLSNAFRQLLSDHGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASHVPPHFWAEAV 827

Query: 546  STSVYLINLQPSTHLNGCSPGE 611
            STSVYLINLQPS+ L G S G+
Sbjct: 828  STSVYLINLQPSSILQGRSAGD 849


>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
          Length = 1385

 Score =  307 bits (786), Expect = 3e-81
 Identities = 151/277 (54%), Positives = 190/277 (68%)
 Frame = +3

Query: 6    SRMSALLRSGVLGAVSPPSDVVCFGCKLGKQLQRPYSLSMSQTTAPFELIHSDVWGPAPF 185
            SR+S+L+R G+LG+VS    + C G                            VWGPAPF
Sbjct: 525  SRLSSLVRRGLLGSVSGDVSLDCQGY---------------------------VWGPAPF 557

Query: 186  VSKGGHRYYVLFIDDYTRFTWLYFMTNRSQLLSIYRSFSTMIHTQFSASIKIFRSDSGGE 365
            VSKGGHRYY++FIDD++R TW+YFM++RS+ LSIY+ F+TM+ TQFS  I++FR+DS GE
Sbjct: 558  VSKGGHRYYIIFIDDFSRHTWIYFMSSRSEALSIYKQFATMVRTQFSTPIRVFRADSTGE 617

Query: 366  YTSHAFRAFLSSEGTLPQLSCPGAHPQNGVAERKHRHILETTRALLLGSFLPPHFWAEAV 545
            Y SH   +FL+ +GTL Q SCPGAH QNGVAERKHRH+LE+ RAL++ + +PPHFWAEAV
Sbjct: 618  YLSHRLHSFLAEQGTLAQFSCPGAHAQNGVAERKHRHLLESARALMIAASIPPHFWAEAV 677

Query: 546  STSVYLINLQPSTHLNGCSPGECLHGTPPRYDHLRVFGCRCFVLLSPREKTKLTAQSVSC 725
            ST+ YL+N+QPS+ L G  P E L G  P Y  LR+F C C+VLL+PR            
Sbjct: 678  STATYLVNIQPSSALQGAIPFERLCGLLPDYSALRLFSCVCYVLLAPRG----------- 726

Query: 726  VFLGYSLEHKGYRCYDPVTRRIRISRDVTFDESTPFY 836
               G S +HKGYRC+DPV RR+RISRDVTFDES PFY
Sbjct: 727  ---GNSADHKGYRCWDPVGRRMRISRDVTFDESRPFY 760


>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
          Length = 1261

 Score =  288 bits (737), Expect = 1e-75
 Identities = 147/276 (53%), Positives = 187/276 (67%)
 Frame = +3

Query: 6    SRMSALLRSGVLGAVSPPSDVVCFGCKLGKQLQRPYSLSMSQTTAPFELIHSDVWGPAPF 185
            SR+  L+  G+LG+VS   +  C  C+LGKQ   P++ S S + + FELIHSDVWGP P 
Sbjct: 403  SRVQQLVSRGLLGSVSK-DNFDCTSCQLGKQPALPFNNSESISKSIFELIHSDVWGPFPV 461

Query: 186  VSKGGHRYYVLFIDDYTRFTWLYFMTNRSQLLSIYRSFSTMIHTQFSASIKIFRSDSGGE 365
             S GG RY+V+FIDDY+R++W++ M +RS++LSIY +F+ M+ TQFS  IK FRSD+  E
Sbjct: 462  ASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALE 521

Query: 366  YTSHAFRAFLSSEGTLPQLSCPGAHPQNGVAERKHRHILETTRALLLGSFLPPHFWAEAV 545
            YT HAF+A L S GT+   +CPG   QNG AERK RHIL+T RALLL + +P  FW EA 
Sbjct: 522  YTQHAFQALLHSYGTIHHPTCPGTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEAS 581

Query: 546  STSVYLINLQPSTHLNGCSPGECLHGTPPRYDHLRVFGCRCFVLLSPREKTKLTAQSVSC 725
              +V+ IN  PS  ++  +P E L G+PP Y HLR FG  CFVLL P E  KL  QS  C
Sbjct: 582  LHAVHAINRIPSAVIHNQTPYERLFGSPPNYHHLRSFGSACFVLLQPHEHNKLEPQSRLC 641

Query: 726  VFLGYSLEHKGYRCYDPVTRRIRISRDVTFDESTPF 833
             FLGY    KGYRCYDPV+ R+R+SR+V F E   F
Sbjct: 642  CFLGYGETQKGYRCYDPVSHRLRVSRNVVFWEHRLF 677


>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  287 bits (734), Expect = 3e-75
 Identities = 143/278 (51%), Positives = 185/278 (66%)
 Frame = +3

Query: 6    SRMSALLRSGVLGAVSPPSDVVCFGCKLGKQLQRPYSLSMSQTTAPFELIHSDVWGPAPF 185
            SR+  L  +G LG +       C GCKL K    P++ S S +++PF+LIHSDVWGP+P 
Sbjct: 491  SRLRFLASTGALGNLKTCDISDCSGCKLAKFSALPFNRSTSVSSSPFDLIHSDVWGPSPV 550

Query: 186  VSKGGHRYYVLFIDDYTRFTWLYFMTNRSQLLSIYRSFSTMIHTQFSASIKIFRSDSGGE 365
             +KGG RYYV FIDD+TR+ W+Y M +RS+   IY +F  +I TQ SA IK FR D GGE
Sbjct: 551  STKGGSRYYVSFIDDHTRYCWVYLMKHRSEFFEIYAAFRALIKTQHSAVIKCFRCDLGGE 610

Query: 366  YTSHAFRAFLSSEGTLPQLSCPGAHPQNGVAERKHRHILETTRALLLGSFLPPHFWAEAV 545
            YTS+ F   L+ +GT+ Q SC     QNGVAERKHRHI+ET R+LLL +F+   FW EAV
Sbjct: 611  YTSNKFCQMLALDGTIHQTSCTDTPEQNGVAERKHRHIVETARSLLLSAFVLSEFWGEAV 670

Query: 546  STSVYLINLQPSTHLNGCSPGECLHGTPPRYDHLRVFGCRCFVLLSPREKTKLTAQSVSC 725
             T+V LIN  PS+H +G SP E L+G  P Y   RVFGC  FVL    E+ KL+++S  C
Sbjct: 671  LTAVSLINTIPSSHSSGLSPFEKLYGHVPDYSSFRVFGCTYFVLHPHVERNKLSSRSAIC 730

Query: 726  VFLGYSLEHKGYRCYDPVTRRIRISRDVTFDESTPFYA 839
            VFLGY    KGYRC+DP+T+++ +S  V F E  PF++
Sbjct: 731  VFLGYGEGKKGYRCFDPITQKLYVSHHVVFLEHIPFFS 768