BLASTX nr result

ID: Dioscorea21_contig00008988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008988
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]   188   5e-46
ref|XP_003596000.1| Translation initiation factor IF-2 [Medicago...   187   8e-46
ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   187   1e-45
emb|CBI21817.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002532827.1| mitochondrial translational initiation facto...   186   2e-45

>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score =  188 bits (477), Expect = 5e-46
 Identities = 96/124 (77%), Positives = 110/124 (88%)
 Frame = +3

Query: 6    FEVVESLDVAREKAEACGVSSRAARISAKAGEGKITLSSIASAVSAGKQGGLDMHQLNII 185
            FEVV SLD+ARE+AEA   S R  RISAKAG+GK+TLSS ASAVS G Q GLD+HQLNII
Sbjct: 732  FEVVGSLDIARERAEARAESLRQERISAKAGDGKVTLSSFASAVSGGSQSGLDLHQLNII 791

Query: 186  LKVDVQGSIEAIRQAIQVLPQDNVTLKFLLQAPGDISASDVDLAVATQAVIFGFNVKAPG 365
            +KVDVQGSIEA+RQA+QVLPQDNV LKFLLQA GDISASD+DLAVA++A++ GFNV+APG
Sbjct: 792  MKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISASDIDLAVASKAIVIGFNVRAPG 851

Query: 366  SVKS 377
            SVKS
Sbjct: 852  SVKS 855


>ref|XP_003596000.1| Translation initiation factor IF-2 [Medicago truncatula]
            gi|355485048|gb|AES66251.1| Translation initiation factor
            IF-2 [Medicago truncatula]
          Length = 1041

 Score =  187 bits (475), Expect = 8e-46
 Identities = 95/124 (76%), Positives = 112/124 (90%)
 Frame = +3

Query: 6    FEVVESLDVAREKAEACGVSSRAARISAKAGEGKITLSSIASAVSAGKQGGLDMHQLNII 185
            FEVVESLD AREKAE+  +S R  RISAKAG+GK+TLSS+ASAVS+GK  GLD+HQLNII
Sbjct: 770  FEVVESLDTAREKAESRVMSLRDERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNII 829

Query: 186  LKVDVQGSIEAIRQAIQVLPQDNVTLKFLLQAPGDISASDVDLAVATQAVIFGFNVKAPG 365
            LKVD+QGSIEA++QA+QVLPQDNVTLKFL++  GD+S SDVDLA A++A+IFGFNVKAPG
Sbjct: 830  LKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDVSTSDVDLAAASKAIIFGFNVKAPG 889

Query: 366  SVKS 377
            SVKS
Sbjct: 890  SVKS 893


>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
            chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/124 (76%), Positives = 110/124 (88%)
 Frame = +3

Query: 6    FEVVESLDVAREKAEACGVSSRAARISAKAGEGKITLSSIASAVSAGKQGGLDMHQLNII 185
            FEVV SLD+ARE+AEA   S R  RIS+KAG+GK+TLSS ASAVS G Q GLD+HQLNII
Sbjct: 742  FEVVGSLDIARERAEARAESLRQERISSKAGDGKVTLSSFASAVSGGSQSGLDLHQLNII 801

Query: 186  LKVDVQGSIEAIRQAIQVLPQDNVTLKFLLQAPGDISASDVDLAVATQAVIFGFNVKAPG 365
            +KVDVQGSIEA+RQA+QVLPQDNV LKFLLQA GDISASD+DLAVA++A++ GFNV+APG
Sbjct: 802  MKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISASDIDLAVASKAIVIGFNVRAPG 861

Query: 366  SVKS 377
            SVKS
Sbjct: 862  SVKS 865


>emb|CBI21817.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/124 (76%), Positives = 110/124 (88%)
 Frame = +3

Query: 6    FEVVESLDVAREKAEACGVSSRAARISAKAGEGKITLSSIASAVSAGKQGGLDMHQLNII 185
            FEVV SLD+ARE+AEA   S R  RIS+KAG+GK+TLSS ASAVS G Q GLD+HQLNII
Sbjct: 632  FEVVGSLDIARERAEARAESLRQERISSKAGDGKVTLSSFASAVSGGSQSGLDLHQLNII 691

Query: 186  LKVDVQGSIEAIRQAIQVLPQDNVTLKFLLQAPGDISASDVDLAVATQAVIFGFNVKAPG 365
            +KVDVQGSIEA+RQA+QVLPQDNV LKFLLQA GDISASD+DLAVA++A++ GFNV+APG
Sbjct: 692  MKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISASDIDLAVASKAIVIGFNVRAPG 751

Query: 366  SVKS 377
            SVKS
Sbjct: 752  SVKS 755


>ref|XP_002532827.1| mitochondrial translational initiation factor, putative [Ricinus
            communis] gi|223527418|gb|EEF29557.1| mitochondrial
            translational initiation factor, putative [Ricinus
            communis]
          Length = 1033

 Score =  186 bits (471), Expect = 2e-45
 Identities = 94/124 (75%), Positives = 111/124 (89%)
 Frame = +3

Query: 6    FEVVESLDVAREKAEACGVSSRAARISAKAGEGKITLSSIASAVSAGKQGGLDMHQLNII 185
            FE V SLD+AREKAEA     R  RI+AKAG+GKITLSS+ASAVS+G+  G+D+HQLNII
Sbjct: 760  FEAVASLDIAREKAEARAELLRNERITAKAGDGKITLSSLASAVSSGRLSGIDLHQLNII 819

Query: 186  LKVDVQGSIEAIRQAIQVLPQDNVTLKFLLQAPGDISASDVDLAVATQAVIFGFNVKAPG 365
            LKVDVQGS+EA+RQA+QVLPQDNVTLKFLLQA GD+S+SDVDLA+A++A+I GFNVKAPG
Sbjct: 820  LKVDVQGSVEAVRQALQVLPQDNVTLKFLLQATGDVSSSDVDLAIASEAIILGFNVKAPG 879

Query: 366  SVKS 377
            SVKS
Sbjct: 880  SVKS 883


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