BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008982
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM10996.1| nuclear matrix constituent protein 1 [Allium cepa]     85   3e-14
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...    72   2e-10
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]    64   8e-08
emb|CBI27082.3| unnamed protein product [Vitis vinifera]               60   1e-06
ref|XP_003520054.1| PREDICTED: putative nuclear matrix constitue...    58   6e-06

>dbj|BAM10996.1| nuclear matrix constituent protein 1 [Allium cepa]
          Length = 1217

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 86/298 (28%), Positives = 124/298 (41%), Gaps = 2/298 (0%)
 Frame = +1

Query: 34   GDRQLNGDGKISMNTRDE-SEGDSIHANQMQASSRQNKRPADTSMTTSDLDAEDSDXXXX 210
            GD  +  + K S    DE S+G S+H      + ++ +R   + MT S+ D E+S+    
Sbjct: 975  GDTLIVEEAKESSQQNDEQSQGASVHTGGTSNTRQKRRRAPASEMTNSEHDVEESESQSQ 1034

Query: 211  XXXXXXXXKRRHISTAPGTQTSIPGERRYNFRRSTIA-GTVGAVQAVPDQSKGRKTGRRQ 387
                    +++  ++A     +   ERRYN R ST+A  +V A  AV DQ+K       Q
Sbjct: 1035 SISIGRGRRKKRQTSAASEVQAPVVERRYNLRHSTVAKNSVAATLAVSDQAK------VQ 1088

Query: 388  TDESKMAKGDVVEDGEGSSRAAPTDEPSYACSGENKRTCSQQKTTLVETVVEAEISSQNI 567
            T  S  A  D       +++ +  D+P  A  G +K T + QKTT   T    E+SS+  
Sbjct: 1089 TKASHQASHD-------NNQISMGDDP--ALEGSHKVTHTVQKTT---TASVMEVSSKPA 1136

Query: 568  IQSGRREAEVVTNDYIIKRSEISVESMDGEDEVNGTELEAATPATPSDGDSGXXXXXXXX 747
            ++    E  VV +   ++ SE+S  S + E EV G    A  PATPS G S         
Sbjct: 1137 MEETHEENIVVRS---VEISEMSA-SEEAEGEVQGVPPIAEEPATPSSGSS--------- 1183

Query: 748  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHNASIGKKLWTFFTT 921
                                                      +HNASIGKKLW FFTT
Sbjct: 1184 ------------------------TSGDIGNDDDMDDDDEEERHNASIGKKLWNFFTT 1217


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 85/314 (27%), Positives = 124/314 (39%), Gaps = 7/314 (2%)
 Frame = +1

Query: 1    AKAFLGEASEGGDRQLNGDGKI--SMNTRDESEGDSIHANQMQAS-SRQNKRPADTSMTT 171
            AKAFLGE  E    +LNGD +   S  T +E E ++ HA +  ++ +R+ +R   + +T 
Sbjct: 961  AKAFLGETPE--IPELNGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITE 1018

Query: 172  SDLDAEDSDXXXXXXXXXXXXKRRHISTAPGTQTSIPGERRYNFRRSTIAGTVGAVQAVP 351
            S+ DA DS+            KRR  + AP  QT  PGE+RYN RR   AGTV   QA  
Sbjct: 1019 SEQDAADSEGRSDSVTAGGRGKRRQ-TVAPVVQT--PGEKRYNLRRHKTAGTVATAQASA 1075

Query: 352  DQSKGRKTGRRQTDESKMAKGDVVEDGEGSSRAAP--TDEPSYACSGENKRTCSQQKTTL 525
            +  K  + G           GD  +D    ++A P     PS A S +N +T      T 
Sbjct: 1076 NLPKRDEKG-----------GDGGDDNTLQTKANPKAASSPSLADS-DNPKTTPLVHVTT 1123

Query: 526  VETVVEAEISSQNIIQSGRREAEVVTND--YIIKRSEISVESMDGEDEVNGTELEAATPA 699
            +++V   E S   +++    +     ND   + +  E+  E      +  G E E  + +
Sbjct: 1124 LKSVEIREYSPDRVVRFKTVDIVGGNNDSARLAENMELRQEIPGNPGDTPGYEDENGSMS 1183

Query: 700  TPSDGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKH 879
               D +S                                                     
Sbjct: 1184 HEEDDNSDEDESEHPG-------------------------------------------- 1199

Query: 880  NASIGKKLWTFFTT 921
            +ASIGKKLW FFTT
Sbjct: 1200 DASIGKKLWNFFTT 1213


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 77/299 (25%), Positives = 115/299 (38%), Gaps = 7/299 (2%)
 Frame = +1

Query: 46   LNGDGKI--SMNTRDESEGDSIHANQMQAS-SRQNKRPADTSMTTSDLDAEDSDXXXXXX 216
            LNGD +   S  T +E E ++ HA +  ++ +R+ +R   + +T S+ DA DS+      
Sbjct: 995  LNGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSV 1054

Query: 217  XXXXXXKRRHISTAPGTQTSIPGERRYNFRRSTIAGTVGAVQAVPDQSKGRKTGRRQTDE 396
                  KRR  + AP  QT  PGE+RYN RR   AGTV   QA  +  K  + G      
Sbjct: 1055 TAGGRGKRRQ-TVAPVVQT--PGEKRYNLRRHKTAGTVATAQASANLPKRDEKG------ 1105

Query: 397  SKMAKGDVVEDGEGSSRAAP--TDEPSYACSGENKRTCSQQKTTLVETVVEAEISSQNII 570
                 GD  +D    ++A P     PS A S +N +T      T +++V   E S   ++
Sbjct: 1106 -----GDGGDDNTLQTKANPKAASSPSLADS-DNPKTTPLVHVTTLKSVEIREYSPDRVV 1159

Query: 571  QSGRREAEVVTND--YIIKRSEISVESMDGEDEVNGTELEAATPATPSDGDSGXXXXXXX 744
            +    +     ND   + +  E+  E      +  G E E  + +   D +S        
Sbjct: 1160 RFKTVDIVGGNNDSARLAENMELRQEIPGNPGDTPGYEDENGSMSHEEDDNSDEDESEHP 1219

Query: 745  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHNASIGKKLWTFFTT 921
                                                         +ASIGKKLW FFTT
Sbjct: 1220 G--------------------------------------------DASIGKKLWNFFTT 1234


>emb|CBI27082.3| unnamed protein product [Vitis vinifera]
          Length = 1122

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 71/288 (24%), Positives = 110/288 (38%), Gaps = 5/288 (1%)
 Frame = +1

Query: 73   NTRDESEGDSIHANQMQAS-SRQNKRPADTSMTTSDLDAEDSDXXXXXXXXXXXXKRRHI 249
            + ++E E ++ HA +  ++ +R+ +R   + +T S+ DA DS+            KRR  
Sbjct: 894  SVKNEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQ- 952

Query: 250  STAPGTQTSIPGERRYNFRRSTIAGTVGAVQAVPDQSKGRKTGRRQTDESKMAKGDVVED 429
            + AP  QT  PGE+RYN RR   AGTV   QA  +  K  + G           GD  +D
Sbjct: 953  TVAPVVQT--PGEKRYNLRRHKTAGTVATAQASANLPKRDEKG-----------GDGGDD 999

Query: 430  GEGSSRAAP--TDEPSYACSGENKRTCSQQKTTLVETVVEAEISSQNIIQSGRREAEVVT 603
                ++A P     PS A S +N +T      T +++V   E S   +++    +     
Sbjct: 1000 NTLQTKANPKAASSPSLADS-DNPKTTPLVHVTTLKSVEIREYSPDRVVRFKTVDIVGGN 1058

Query: 604  ND--YIIKRSEISVESMDGEDEVNGTELEAATPATPSDGDSGXXXXXXXXXXXXXXXXXX 777
            ND   + +  E+  E      +  G E E  + +   D +S                   
Sbjct: 1059 NDSARLAENMELRQEIPGNPGDTPGYEDENGSMSHEEDDNSDEDESEHPG---------- 1108

Query: 778  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHNASIGKKLWTFFTT 921
                                              +ASIGKKLW FFTT
Sbjct: 1109 ----------------------------------DASIGKKLWNFFTT 1122


>ref|XP_003520054.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Glycine max]
          Length = 1210

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
 Frame = +1

Query: 1    AKAFLGEASEGGDRQLNGDGKISMNT---RDESEGDSIHANQMQASSRQNKRPADTS-MT 168
            AK FLG+A     +++      S+NT   R++S  DS H  +   ++R+ ++ A TS +T
Sbjct: 967  AKEFLGKAP----KKIENASLQSLNTDHIREDSREDSSHTEKAIGNTRRKRQRAQTSRIT 1022

Query: 169  TSDLDAEDSDXXXXXXXXXXXXKRRHISTAPGTQTSIPGERRYNFRRSTIAGTVGAVQAV 348
             S+ +A DS+            K+R  + AP TQ  + GE+RYN RR  IAG   + Q +
Sbjct: 1023 ESEQNAGDSEGQSDSITAGGRRKKRQ-TVAPLTQ--VTGEKRYNLRRHKIAGKDSSTQNI 1079

Query: 349  PDQSKGRKTGRRQTDESKMAKGDVVEDGEGSSRAAPTDEPSYACSGENKRTCSQQKTTLV 528
             + +K        + E + A G +    EG        E S A   +N +  +  + + V
Sbjct: 1080 SNATK--------SVEKEAAAGKL----EGDKNTPEVVETSLAVDDDNVQDTNLVQVSTV 1127

Query: 529  ETV 537
            +TV
Sbjct: 1128 KTV 1130