BLASTX nr result

ID: Dioscorea21_contig00008968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008968
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]                 138   1e-30
ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|1...   134   2e-29
ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...   134   3e-29
gb|AFK44966.1| unknown [Lotus japonicus]                              132   9e-29
ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|1...   132   9e-29

>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
          Length = 271

 Score =  138 bits (348), Expect = 1e-30
 Identities = 87/212 (41%), Positives = 118/212 (55%), Gaps = 5/212 (2%)
 Frame = +3

Query: 186 MILNGS-VASGTMAMKLAPCNVKQRSFLAHSRLGNTPSYVSVAFGGFPKLKGLSLAHQER 362
           MILNG  +++G +      CN K  S+L+ S    TP  +S       K    S A  + 
Sbjct: 1   MILNGCYLSTGGICKPYKACNSK--SYLSASSC--TPLPLSKVIVTCVKR---SPAPHQY 53

Query: 363 KVLPMRGGSTQDFVGPSIFPLEGDFATLQNKKPWSPWSCKVKSSFVCRASKSLIY----P 530
                +G S  D    S   L G++  L N  P  P   ++  SF  RASK + Y    P
Sbjct: 54  PTSCSKGFSFLDLSSASSLLLSGEYGGLSNAIPQLPRRSQL--SFSPRASKDVPYSYRFP 111

Query: 531 QMEAKPQWWWRSLACVPYLLPISDTLVQAALAFQLTNFLEEVDFLTFPLISTVTLLPGWA 710
            M  KP+WWWR+LAC+PYL+P+ +T + A  A+ L  FLE+++FLT+P +  +  LP W 
Sbjct: 112 PMTKKPRWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDLEFLTYPFLGAIGRLPSWF 171

Query: 711 LIAMSTVGYIGIVRRKEWPHFLRFHVVMAMLL 806
           L+A   V Y+GIVRRKEWPHF RFHVV+ MLL
Sbjct: 172 LMAYFFVAYLGIVRRKEWPHFYRFHVVIGMLL 203


>ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|118482844|gb|ABK93337.1|
           unknown [Populus trichocarpa]
           gi|222842476|gb|EEE80023.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score =  134 bits (338), Expect = 2e-29
 Identities = 70/157 (44%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
 Frame = +3

Query: 351 HQERKVLPMRGGSTQDFVGPSIFPLEGDFATLQNKKPWSPWSCKVKSSFVC-RASKSLIY 527
           H E K    RG  +      S   L GD+    +  P  P   + + S+ C RASK + Y
Sbjct: 51  HLESKSWSSRGFLSLHLSAASTPLLSGDYCGFSHYIPTFP---RQRRSYSCPRASKDVPY 107

Query: 528 ----PQMEAKPQWWWRSLACVPYLLPISDTLVQAALAFQLTNFLEEVDFLTFPLISTVTL 695
               P M  KP+WWWR+LAC+PYL+P+ +T + A  A+ L  FLE+ +FLT+P +  +  
Sbjct: 108 SFRFPPMTKKPRWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGR 167

Query: 696 LPGWALIAMSTVGYIGIVRRKEWPHFLRFHVVMAMLL 806
           LP W L+A   V Y+G+VRRKEWPHF RFHVVM MLL
Sbjct: 168 LPSWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLL 204


>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
           gi|302142547|emb|CBI19750.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  134 bits (336), Expect = 3e-29
 Identities = 83/214 (38%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
 Frame = +3

Query: 186 MILNGSV-ASGTMAMKLAPCN--VKQRSFLAHSRLGNTPSYVSVAFGGFPKLKGLSLAHQ 356
           MILNGSV  SG   M    C      + F     L    + +S+     P         Q
Sbjct: 1   MILNGSVMTSGCALMDSRACKPVTSHQVFACFPHLPARTASLSIRSSWRPC--------Q 52

Query: 357 ERKVLPMRGGSTQDFVGPSIFPLEGDFATLQNKKPWSPWSCKVKSSFVCRASK----SLI 524
           E K     G         S   L GD   L +  P  P   + +S    RASK    S  
Sbjct: 53  ELKSWSFGGMPLSHLSAASTPLLSGDQGGLSHTLPMLPR--RPRSPTPLRASKDVPYSFR 110

Query: 525 YPQMEAKPQWWWRSLACVPYLLPISDTLVQAALAFQLTNFLEEVDFLTFPLISTVTLLPG 704
           YP M  KPQWWWR+LAC+PYL+P+ +T + A  A+ L  FLE+ +F+T+P +  +  LP 
Sbjct: 111 YPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFVTYPFLEFIGRLPS 170

Query: 705 WALIAMSTVGYIGIVRRKEWPHFLRFHVVMAMLL 806
           W+L+A   + Y+G+VR+KEWPHF RFHVVM MLL
Sbjct: 171 WSLMAYFFIAYLGVVRKKEWPHFFRFHVVMGMLL 204


>gb|AFK44966.1| unknown [Lotus japonicus]
          Length = 271

 Score =  132 bits (332), Expect = 9e-29
 Identities = 85/212 (40%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
 Frame = +3

Query: 186 MILNGSVA-SGTMAMKLAPCNVKQRSFLAHSRLGNTPSYVSVAFGGFPKLKGLSLAHQER 362
           MI NG +   G   +   PC      F   S+L        VA        G SL   E 
Sbjct: 1   MIRNGCIVHQGYAPLNTRPCRGSSSVFSCASQLP-----AEVAVSNIRSSWGHSL---ES 52

Query: 363 KVLPMRGGSTQDFVGPSIFPLEGDFATLQNKKPWSPWSCKVKSSFVCRASK----SLIYP 530
           K L  RG +  +    S   L G    L    P  P   + KSS   RA+K    S  +P
Sbjct: 53  KSLVPRGIALSNMSSASSLLLSGGQNLLFRTVPVLPPRVR-KSSMAPRAAKDVPSSFRFP 111

Query: 531 QMEAKPQWWWRSLACVPYLLPISDTLVQAALAFQLTNFLEEVDFLTFPLISTVTLLPGWA 710
            M  KP+WWWR+LAC+PYL+P+ +T + A  A+ L  FLE  +F T+P +  +  LP W 
Sbjct: 112 PMTKKPRWWWRTLACLPYLMPLHETWMYAETAYNLHPFLEFFEFYTYPFLMAIGSLPSWF 171

Query: 711 LIAMSTVGYIGIVRRKEWPHFLRFHVVMAMLL 806
           L+A   V Y+GIVRRKEWPHF RFHVVM MLL
Sbjct: 172 LMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLL 203


>ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|118487446|gb|ABK95551.1|
           unknown [Populus trichocarpa]
           gi|222857127|gb|EEE94674.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score =  132 bits (332), Expect = 9e-29
 Identities = 64/133 (48%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
 Frame = +3

Query: 423 LEGDFATLQNKKPWSPWSCKVKSSFVC-RASKSLIY----PQMEAKPQWWWRSLACVPYL 587
           L GD+    +  P  P   + + S+ C RASK + Y    P M  KP WWWR+LAC+PYL
Sbjct: 75  LSGDYGRFSHNIPTYP---RQRRSYSCPRASKDVPYSYRFPPMTKKPGWWWRTLACLPYL 131

Query: 588 LPISDTLVQAALAFQLTNFLEEVDFLTFPLISTVTLLPGWALIAMSTVGYIGIVRRKEWP 767
           +P+ +T + A  A+ L  FLE+ +FLT+P +  +  LP W L+A   V Y+G+VRRKEWP
Sbjct: 132 MPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGVVRRKEWP 191

Query: 768 HFLRFHVVMAMLL 806
           HF RFHVVM MLL
Sbjct: 192 HFFRFHVVMGMLL 204


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