BLASTX nr result

ID: Dioscorea21_contig00008959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008959
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|1...   193   2e-47
gb|AFQ33613.1| beta-amylase 1 [Citrus trifoliata]                     190   2e-46
gb|AFP89361.1| beta-amylase [Citrus limon]                            190   2e-46
ref|XP_002326690.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_004147264.1| PREDICTED: beta-amylase 3, chloroplastic-lik...   189   4e-46

>ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|118487474|gb|ABK95564.1|
           unknown [Populus trichocarpa]
           gi|222870256|gb|EEF07387.1| predicted protein [Populus
           trichocarpa]
          Length = 548

 Score =  193 bits (491), Expect = 2e-47
 Identities = 107/198 (54%), Positives = 138/198 (69%), Gaps = 9/198 (4%)
 Frame = +1

Query: 64  SLTLRLSTSFMSIINTTKAHKLNDDFSANSVVRAFXXXXXXXXXXKLRTRATNTTQDVAG 243
           ++TLR STSF+S+ +T ++ K  D FS                    R +A N+ Q+   
Sbjct: 2   TITLRSSTSFISLRHT-RSLKTPDGFSGTVCFAQIKP--------SCRLQAKNSKQEAQL 52

Query: 244 LMEEMKV-EGRVA---ERLHHLV-----KHGTRVPVYVMLPLDTVAMNGEGLHKGKALNA 396
             +++ V EGR +   E+LH +         +RVPV+VMLPLDTV + G  L+K +A+NA
Sbjct: 53  SQDDILVTEGRKSKNWEKLHAISGPDHSSSNSRVPVFVMLPLDTVTIGGN-LNKPRAMNA 111

Query: 397 SLMALRSAGVEGVMVDVWWGIVEKQGPLKYNWEGYGQLLEMIKKNGLKVQMVMSFHQCGG 576
           SLMALRSAGVEGVMVD WWG+VEK GPLKYNWEGY +L++M++K+GLK+Q+VMSFHQCGG
Sbjct: 112 SLMALRSAGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGG 171

Query: 577 NVGDSCSIPLPPWVHEEM 630
           NVGDSCSIPLPPWV EEM
Sbjct: 172 NVGDSCSIPLPPWVLEEM 189


>gb|AFQ33613.1| beta-amylase 1 [Citrus trifoliata]
          Length = 551

 Score =  190 bits (482), Expect = 2e-46
 Identities = 102/200 (51%), Positives = 136/200 (68%), Gaps = 11/200 (5%)
 Frame = +1

Query: 64  SLTLRLSTSFMSIINTTKAHKLNDDFSANSVVRAFXXXXXXXXXXKLRTRATNTTQDVAG 243
           +LTLR STSF+++ N TK  K  D+FS+ +   A             R RA ++ Q+   
Sbjct: 2   ALTLRSSTSFINL-NDTKTIKTPDEFSSPTTCFA-------KIKPSRRLRAKSSMQEAQL 53

Query: 244 LMEEMKVEGRVA------ERLHHLVK-----HGTRVPVYVMLPLDTVAMNGEGLHKGKAL 390
             ++    G +       E +H L       H  +VPV+VMLPLDT++ +G  L+K +A+
Sbjct: 54  CRDKHSTMGGIIRKSEKREMVHELASPPHNHHRNKVPVFVMLPLDTLSNSGH-LNKPRAM 112

Query: 391 NASLMALRSAGVEGVMVDVWWGIVEKQGPLKYNWEGYGQLLEMIKKNGLKVQMVMSFHQC 570
           NASLMAL+SAGVEGVMVD WWG+VEK GPL YNWEGY +L++M++K+GLK+Q+VMSFHQC
Sbjct: 113 NASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELIQMVQKHGLKLQVVMSFHQC 172

Query: 571 GGNVGDSCSIPLPPWVHEEM 630
           GGNVGDSC+IPLPPWV EE+
Sbjct: 173 GGNVGDSCTIPLPPWVLEEI 192


>gb|AFP89361.1| beta-amylase [Citrus limon]
          Length = 551

 Score =  190 bits (482), Expect = 2e-46
 Identities = 102/200 (51%), Positives = 136/200 (68%), Gaps = 11/200 (5%)
 Frame = +1

Query: 64  SLTLRLSTSFMSIINTTKAHKLNDDFSANSVVRAFXXXXXXXXXXKLRTRATNTTQDVAG 243
           +LTLR STSF+++ N TK  K  D+FS+ +   A             R RA ++ Q+   
Sbjct: 2   ALTLRSSTSFINL-NDTKTIKTPDEFSSPTTCFA-------KIKPSRRLRAKSSMQEAQL 53

Query: 244 LMEEMKVEGRVA------ERLHHLVK-----HGTRVPVYVMLPLDTVAMNGEGLHKGKAL 390
             ++    G +       E +H L       H  +VPV+VMLPLDT++ +G  L+K +A+
Sbjct: 54  CRDKHSTMGGIIRKSEKREMVHELASPPHNHHRNKVPVFVMLPLDTLSNSGH-LNKPRAM 112

Query: 391 NASLMALRSAGVEGVMVDVWWGIVEKQGPLKYNWEGYGQLLEMIKKNGLKVQMVMSFHQC 570
           NASLMAL+SAGVEGVMVD WWG+VEK GPL YNWEGY +L++M++K+GLK+Q+VMSFHQC
Sbjct: 113 NASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELIQMVQKHGLKLQVVMSFHQC 172

Query: 571 GGNVGDSCSIPLPPWVHEEM 630
           GGNVGDSC+IPLPPWV EE+
Sbjct: 173 GGNVGDSCTIPLPPWVLEEI 192


>ref|XP_002326690.1| predicted protein [Populus trichocarpa] gi|222834012|gb|EEE72489.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  189 bits (481), Expect = 3e-46
 Identities = 103/194 (53%), Positives = 135/194 (69%), Gaps = 8/194 (4%)
 Frame = +1

Query: 73  LRLSTSFMSIINTTKAHKLNDDFSANSVVRAFXXXXXXXXXXKLRTRATNTTQDVAGLME 252
           L+ STSF+S+   T++ K  DDFS                    R +A N+ Q+     +
Sbjct: 5   LQSSTSFISL-KDTRSPKTPDDFSGT--------ICFAHIKPSCRLQAKNSMQEAQLSHD 55

Query: 253 E-MKVEGRVAER---LHHLV----KHGTRVPVYVMLPLDTVAMNGEGLHKGKALNASLMA 408
           E +  EGR +++   LH +      + ++VPV+VMLPLDT+ + G  L+K +A+NASLMA
Sbjct: 56  EILMTEGRKSKKGGELHAISGPRSSNDSKVPVFVMLPLDTITIGGN-LNKPRAMNASLMA 114

Query: 409 LRSAGVEGVMVDVWWGIVEKQGPLKYNWEGYGQLLEMIKKNGLKVQMVMSFHQCGGNVGD 588
           LRSAGVEGVMVD WWG+VEK GPLKYNWEGY +L++M++K+GLK+Q+VMSFHQCGGNVGD
Sbjct: 115 LRSAGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGD 174

Query: 589 SCSIPLPPWVHEEM 630
           SCSIPLPPWV EEM
Sbjct: 175 SCSIPLPPWVLEEM 188


>ref|XP_004147264.1| PREDICTED: beta-amylase 3, chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  189 bits (480), Expect = 4e-46
 Identities = 107/197 (54%), Positives = 138/197 (70%), Gaps = 8/197 (4%)
 Frame = +1

Query: 64  SLTLRLSTSFMSIINTT--KAHKLNDDFSANSVVRAFXXXXXXXXXXKLRTRATNTTQDV 237
           +LTLR STSF+++ +T   KA  L D     S  +A           +LR R++      
Sbjct: 2   TLTLRSSTSFINLKDTKIIKAPLLEDLHGIISFKQA-------KPLSRLRIRSS------ 48

Query: 238 AGLMEEMKVE--GRVAERLHHLVK-HGT---RVPVYVMLPLDTVAMNGEGLHKGKALNAS 399
              ++E ++E  G   E+LH L   H T   RVPV+VMLPLDTV + G  L+K +A+NAS
Sbjct: 49  ---LQETRIERGGEKLEKLHSLSSNHHTNDLRVPVFVMLPLDTVTLGGS-LNKPRAMNAS 104

Query: 400 LMALRSAGVEGVMVDVWWGIVEKQGPLKYNWEGYGQLLEMIKKNGLKVQMVMSFHQCGGN 579
           LMAL+SAGVEGVMVD WWG+VEK GP+KYNWEGY +L++M++K+GLK+Q+VMSFHQCGGN
Sbjct: 105 LMALKSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGN 164

Query: 580 VGDSCSIPLPPWVHEEM 630
           VGDSCSIPLPPWV EE+
Sbjct: 165 VGDSCSIPLPPWVLEEI 181


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