BLASTX nr result

ID: Dioscorea21_contig00008954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008954
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   142   2e-32
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   142   2e-32
ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion chann...   139   2e-31
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   137   1e-30

>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  146 bits (369), Expect = 1e-33
 Identities = 73/140 (52%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
 Frame = -2

Query: 412 SQRSNWFLGRAARDRPNWAQEWSRAYLLACAAGLIVDPLFFYTLSISSSLKCLFIDGWFA 233
           S+R  W LG+    R  W QEW+R +LL CA GL VDPLFFY LSIS +  CLF+DGWFA
Sbjct: 10  SKRRGWSLGQVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFVDGWFA 69

Query: 232 ITLTILRCMVDAMHVWNLWLQLKLAYKARRPHEDQEEDGNNKFHSNSSFHG---KRLGYL 62
           IT+T LRCM D +++WN+WLQLK+   A+RPH   E  G+ +    S   G     L YL
Sbjct: 70  ITVTALRCMTDVLYLWNMWLQLKI---AKRPHGGGESGGDGE-RGGSRVAGPCSSALRYL 125

Query: 61  RNMKCFFLDFIVILPVMQIV 2
           +  K FF D  VILP+ QIV
Sbjct: 126 KAKKGFFFDLFVILPLPQIV 145


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
           vinifera]
          Length = 667

 Score =  142 bits (359), Expect = 2e-32
 Identities = 77/170 (45%), Positives = 99/170 (58%), Gaps = 7/170 (4%)
 Frame = -2

Query: 490 SVNSSDTQTSNEEEVNSNQISCKTT-------TSQRSNWFLGRAARDRPNWAQEWSRAYL 332
           S   SD +   EEE    +  C+         +S      L R    R  W QEW+R +L
Sbjct: 13  SYGVSDEEEDEEEEEEDEEEECRDREPLYGRCSSGLKPKCLSRVLDPRAKWVQEWNRVFL 72

Query: 331 LACAAGLIVDPLFFYTLSISSSLKCLFIDGWFAITLTILRCMVDAMHVWNLWLQLKLAYK 152
           L CA GL VDPLFFY LSI+S+  CLF+DGWFAIT+T LRCM DA+H+WN+WLQLK+   
Sbjct: 73  LVCATGLFVDPLFFYVLSINSTCMCLFVDGWFAITVTALRCMTDALHLWNMWLQLKM--- 129

Query: 151 ARRPHEDQEEDGNNKFHSNSSFHGKRLGYLRNMKCFFLDFIVILPVMQIV 2
           A+R      E+G+    +++S    R  YL+  K FF D  VILP+ QIV
Sbjct: 130 AKRTFHVVGEEGSRLHDASASTVALR--YLKAKKGFFFDLFVILPLPQIV 177


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/132 (52%), Positives = 84/132 (63%)
 Frame = -2

Query: 397 WFLGRAARDRPNWAQEWSRAYLLACAAGLIVDPLFFYTLSISSSLKCLFIDGWFAITLTI 218
           W LG+    R  W QEW+R +LL CA GL VDPLFFY LS+S +  CLFIDGWFA+T+T 
Sbjct: 66  WSLGQVLDPRAKWVQEWNRGFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFALTVTA 125

Query: 217 LRCMVDAMHVWNLWLQLKLAYKARRPHEDQEEDGNNKFHSNSSFHGKRLGYLRNMKCFFL 38
           LRCM DA+HVWN+WLQLK+A K         + G+      SS     L YL+  K FF 
Sbjct: 126 LRCMTDALHVWNMWLQLKMAKKPSIGGGIGGDYGDRSGPRFSSPSSVALRYLKAKKGFFF 185

Query: 37  DFIVILPVMQIV 2
           D  VILP+ QI+
Sbjct: 186 DLFVILPLPQII 197


>ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
           sativus]
          Length = 663

 Score =  139 bits (350), Expect = 2e-31
 Identities = 73/166 (43%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
 Frame = -2

Query: 496 DVSVNSSDTQTSNEEEVNSNQISCKTTTSQRSNWFLGRAARDRPNWAQEWSRAYLLACAA 317
           D  ++  +++   EEE +SN   C+      S + +         W +EW+  +LL CAA
Sbjct: 10  DEELDHQESEEEEEEEEHSNAAFCQ------SLYGVASVLDPTSKWVREWNWVFLLVCAA 63

Query: 316 GLIVDPLFFYTLSISSSLKCLFIDGWFAITLTILRCMVDAMHVWNLWLQLKLAYKARRPH 137
           GL VDPLF YTLSIS S  C+FIDGW AIT+T+LRCM DA+H+WN+WLQLK A K+    
Sbjct: 64  GLFVDPLFLYTLSISESWMCVFIDGWLAITVTVLRCMGDALHLWNMWLQLKTATKSSFAG 123

Query: 136 EDQEED-GNNKFHSNSSFHGKRLGYLRNMKCFFLDFIVILPVMQIV 2
             + +  G N+   +SS     L YL++ K FF D  VILP  Q+V
Sbjct: 124 SGEGDGRGENRRLRDSSPRAVALRYLKSKKGFFFDLFVILPFPQVV 169


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/183 (40%), Positives = 97/183 (53%), Gaps = 17/183 (9%)
 Frame = -2

Query: 499 MDVSVNSSDTQTSNEEEV---NSNQIS---------CKTTTSQRSNWFLGRAARDRPNWA 356
           +D +  +SD  T  EEE      N+ S         C   T +     LGR    R  W 
Sbjct: 18  LDYATTTSDDDTEKEEEELVHEQNESSGGGRWFPAACGGGTRRSGGGALGRVLDPRAKWV 77

Query: 355 QEWSRAYLLACAAGLIVDPLFFYTLSISSSLKCLFIDGWFAITLTILRCMVDAMHVWNLW 176
           QEW+R +LL CAAGL VDPLFFY LS+S S  C+F+DGW A+T+T+LRCM DA+HVWN+ 
Sbjct: 78  QEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLRCMTDALHVWNMV 137

Query: 175 LQLKLAYKARRPHEDQEEDGNNKFHSNSSFHGKR-----LGYLRNMKCFFLDFIVILPVM 11
           ++ K+A +           G     S+      R     +GYL +   FF D  VILP+ 
Sbjct: 138 IRCKMAKRTFGLGASTTSSGRGTSSSSVGLRDTRPRSVAMGYLMSRTGFFFDLFVILPLP 197

Query: 10  QIV 2
           QIV
Sbjct: 198 QIV 200