BLASTX nr result

ID: Dioscorea21_contig00008953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008953
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   125   3e-27
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   120   2e-25
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   115   3e-24
ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann...   115   5e-24

>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  125 bits (315), Expect = 3e-27
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -2

Query: 239 WFLGRAARDRPNWAQDWSRAYLLACAAGLIVDPLFFYTLSISNSLMCLFIDGWFAITLTI 60
           W LG+    R  W Q+W+R +LL CA GL VDPLFFY LS+S++ MCLFIDGWFA+T+T 
Sbjct: 66  WSLGQVLDPRAKWVQEWNRGFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFALTVTA 125

Query: 59  LRCMVDAMHVWNLWLQLKL 3
           LRCM DA+HVWN+WLQLK+
Sbjct: 126 LRCMTDALHVWNMWLQLKM 144


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  121 bits (303), Expect = 7e-26
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = -2

Query: 239 WFLGRAARDRPNWAQDWSRAYLLACAAGLIVDPLFFYTLSISNSLMCLFIDGWFAITLTI 60
           W LG+    R  W Q+W+R +LL CA GL VDPLFFY LSIS++ MCLF+DGWFAIT+T 
Sbjct: 15  WSLGQVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFVDGWFAITVTA 74

Query: 59  LRCMVDAMHVWNLWLQLKL 3
           LRCM D +++WN+WLQLK+
Sbjct: 75  LRCMTDVLYLWNMWLQLKI 93


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
           vinifera]
          Length = 667

 Score =  120 bits (300), Expect = 2e-25
 Identities = 49/77 (63%), Positives = 61/77 (79%)
 Frame = -2

Query: 233 LGRAARDRPNWAQDWSRAYLLACAAGLIVDPLFFYTLSISNSLMCLFIDGWFAITLTILR 54
           L R    R  W Q+W+R +LL CA GL VDPLFFY LSI+++ MCLF+DGWFAIT+T LR
Sbjct: 53  LSRVLDPRAKWVQEWNRVFLLVCATGLFVDPLFFYVLSINSTCMCLFVDGWFAITVTALR 112

Query: 53  CMVDAMHVWNLWLQLKL 3
           CM DA+H+WN+WLQLK+
Sbjct: 113 CMTDALHLWNMWLQLKM 129


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
 Frame = -2

Query: 338 MDVSVNSSDTQTSNEEEAXXXXXXXXXXXXXXNWF---------------LGRAARDRPN 204
           +D +  +SD  T  EEE                WF               LGR    R  
Sbjct: 18  LDYATTTSDDDTEKEEEELVHEQNESSGGGR--WFPAACGGGTRRSGGGALGRVLDPRAK 75

Query: 203 WAQDWSRAYLLACAAGLIVDPLFFYTLSISNSLMCLFIDGWFAITLTILRCMVDAMHVWN 24
           W Q+W+R +LL CAAGL VDPLFFY LS+S+S MC+F+DGW A+T+T+LRCM DA+HVWN
Sbjct: 76  WVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLRCMTDALHVWN 135

Query: 23  LWLQLKL 3
           + ++ K+
Sbjct: 136 MVIRCKM 142


>ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 690

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
 Frame = -2

Query: 338 MDVSVNSSDTQTSNEEEAXXXXXXXXXXXXXXNWF---------------LGRAARDRPN 204
           +D +  +SD +T  +EE                WF               LGR    R  
Sbjct: 18  LDYATTTSDEETEQDEEEELVPEENGFGNGVR-WFPAASGCGGRRSGGGALGRVLDPRAK 76

Query: 203 WAQDWSRAYLLACAAGLIVDPLFFYTLSISNSLMCLFIDGWFAITLTILRCMVDAMHVWN 24
           W Q+W+R +LL CAAGL VDPLFFY LS+S+S MC+F+DGW A+T+T+LRCM DA+HVWN
Sbjct: 77  WVQEWNRVFLLVCAAGLFVDPLFFYVLSVSDSCMCVFVDGWLAVTVTVLRCMTDALHVWN 136

Query: 23  LWLQLKL 3
           + ++ K+
Sbjct: 137 MVIRSKM 143


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