BLASTX nr result

ID: Dioscorea21_contig00008938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008938
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046664.1| Os02g0315600 [Oryza sativa Japonica Group] g...   167   1e-38
ref|XP_003572944.1| PREDICTED: transcription factor bHLH144-like...   157   8e-36
ref|XP_002438592.1| hypothetical protein SORBIDRAFT_10g022460 [S...   156   1e-35
gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing pr...   155   4e-35
gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indi...   153   1e-34

>ref|NP_001046664.1| Os02g0315600 [Oryza sativa Japonica Group]
            gi|46389916|dbj|BAD15700.1| unknown protein [Oryza sativa
            Japonica Group] gi|113536195|dbj|BAF08578.1| Os02g0315600
            [Oryza sativa Japonica Group] gi|125539170|gb|EAY85565.1|
            hypothetical protein OsI_06938 [Oryza sativa Indica
            Group] gi|125581839|gb|EAZ22770.1| hypothetical protein
            OsJ_06445 [Oryza sativa Japonica Group]
            gi|215734958|dbj|BAG95680.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215741357|dbj|BAG97852.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215741414|dbj|BAG97909.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 254

 Score =  167 bits (422), Expect = 1e-38
 Identities = 115/255 (45%), Positives = 136/255 (53%), Gaps = 12/255 (4%)
 Frame = +2

Query: 599  PSDWMYLRGSG-SQSHGYQVGGYNHLGDGGNY---GAYAAPSFVPDVPVENRDFPGPLMN 766
            P  + Y  G G    +GY  GGY + G GG Y   GA AA    P V     DFP P MN
Sbjct: 15   PQGYGYGGGYGYGGGYGYDAGGY-YSGGGGGYPSAGAAAAAYEDPMVGRRTHDFPAP-MN 72

Query: 767  GFEFQPMETCPKNFIIFDQTDNKSRVMFHPALAHNF-----SYPSYDIHPSFPHEIGKNL 931
              EFQP  TCPKN++IFDQT  KSRVMFHP+LAH F     +Y +        H+  K  
Sbjct: 73   ELEFQPSATCPKNYVIFDQTCTKSRVMFHPSLAHKFGGGSSAYDNNVYGGGGAHDAAKGA 132

Query: 932  --DS-AIDNQGKLSSSMKEDTEEIDALLCSXXXXXXXXVISTGHTPCNWRXXXXXXXXXX 1102
              DS   D+    S   KEDT+EIDALL S        V+STG TP  +R          
Sbjct: 133  YRDSVGYDDDDSCSVRQKEDTDEIDALL-SSEDGDEDDVVSTGRTP-GYRDGSSPDSTCS 190

Query: 1103 XXXXXXKTIXXXXXXXXXXXXXXXXGRKRERMRKMVKALRQIIPGGEQLDTPAVLDEAVR 1282
                  +                  GRK+ERM+KMV+ L+ IIPGG Q+DTPAVLDEAVR
Sbjct: 191  SSYGGGQA---------------RPGRKKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVR 235

Query: 1283 YLKSLKVEAKKLGIQ 1327
            YLKSLKVE KKLG++
Sbjct: 236  YLKSLKVEVKKLGVR 250


>ref|XP_003572944.1| PREDICTED: transcription factor bHLH144-like [Brachypodium
            distachyon]
          Length = 268

 Score =  157 bits (397), Expect = 8e-36
 Identities = 109/266 (40%), Positives = 137/266 (51%), Gaps = 20/266 (7%)
 Frame = +2

Query: 590  GPMPSDWMYLRGSGSQSHGYQVGGYNH-LGDGGNYGAYAAPSF---VPDVPVENRDFPGP 757
            G  P  + Y    G   +GY  GGYN     GG Y     PS+   +    ++  +   P
Sbjct: 12   GSPPQGYGYGGYGGYGGYGYDAGGYNSGAAAGGYYSNNGYPSYEDALAGQTMKAHESAAP 71

Query: 758  LMNGFEFQPMETCPKNFIIFDQTDNKSRVMFHPALAHNF----SYPSYDIHPSFPHEIGK 925
            L N  EFQP ETCPKN++IFDQT  KSRVMFHP+LA+ F        YD +   P   G 
Sbjct: 72   L-NELEFQPSETCPKNYVIFDQTCTKSRVMFHPSLANKFGGNGGASEYDNYYGAPGSGGN 130

Query: 926  NLDSAI----------DNQGKLSSSM--KEDTEEIDALLCSXXXXXXXXVISTGHTPCNW 1069
              D+A           D    +S S+  KEDT+EIDALLCS        V+STG TP  +
Sbjct: 131  AYDAAAAGKSMYNKDRDYDADMSCSVRHKEDTDEIDALLCS-DDGDEDDVVSTGRTP-GY 188

Query: 1070 RXXXXXXXXXXXXXXXXKTIXXXXXXXXXXXXXXXXGRKRERMRKMVKALRQIIPGGEQL 1249
            R                K+                  +K+ERM+KMV+ L+ IIPGG Q+
Sbjct: 189  RDGSSPDSCSSSYGGGSKS----------RSECTGGRKKKERMKKMVRTLKGIIPGGNQM 238

Query: 1250 DTPAVLDEAVRYLKSLKVEAKKLGIQ 1327
            DTPAVLDEAV+YLKSLKVE KKLG++
Sbjct: 239  DTPAVLDEAVKYLKSLKVEVKKLGVR 264


>ref|XP_002438592.1| hypothetical protein SORBIDRAFT_10g022460 [Sorghum bicolor]
            gi|241916815|gb|EER89959.1| hypothetical protein
            SORBIDRAFT_10g022460 [Sorghum bicolor]
          Length = 270

 Score =  156 bits (395), Expect = 1e-35
 Identities = 109/261 (41%), Positives = 140/261 (53%), Gaps = 25/261 (9%)
 Frame = +2

Query: 614  YLRGSGSQSHGYQVGGYNHLGDGGNYGAY----AAPSFVPDVPVENR---DFPGPLMNGF 772
            Y  G+G+  +GY +   N  G GG Y A     AAP+   + P+  +   DFP PL  G 
Sbjct: 20   YGAGAGAGGYGYDIAAANG-GGGGYYSATDRYPAAPAAAYEDPLAGQRQHDFPAPL-TGL 77

Query: 773  EFQPMETCPKNFIIFDQTDNKSRVMFHPALAHNFS-------------YPSYD--IHP-- 901
            EFQP +TCPKN++IFDQT ++SRVMFHP+LA+NF              Y  YD   +P  
Sbjct: 78   EFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNFGSSPAGGYDYGSHCYGGYDQSYYPGE 137

Query: 902  SFPHEIGKNLDSAIDNQGKLSSSMKEDTEEIDALLCSXXXXXXXXVISTGHTPCNWRXXX 1081
            S  H  G + D A+   G +S   KEDT+EIDAL+ +        V+STG TP       
Sbjct: 138  SAYHGCGGD-DGAVG--GGVSVRQKEDTDEIDALMSTEDGDDEDDVLSTGRTP------- 187

Query: 1082 XXXXXXXXXXXXXKTIXXXXXXXXXXXXXXXXG-RKRERMRKMVKALRQIIPGGEQLDTP 1258
                          T                 G +K+ERM+KMV+ L+ IIPGG+++DTP
Sbjct: 188  ----GCRAGGSPDSTCSSGGYAGGGRKHETGGGEKKKERMKKMVRTLKGIIPGGDRMDTP 243

Query: 1259 AVLDEAVRYLKSLKVEAKKLG 1321
            AVLDEAVRYLKSLKVE KK G
Sbjct: 244  AVLDEAVRYLKSLKVEVKKAG 264


>gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
            [Oryza sativa Japonica Group] gi|125544695|gb|EAY90834.1|
            hypothetical protein OsI_12439 [Oryza sativa Indica
            Group] gi|125586994|gb|EAZ27658.1| hypothetical protein
            OsJ_11606 [Oryza sativa Japonica Group]
            gi|215678773|dbj|BAG95210.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 263

 Score =  155 bits (391), Expect = 4e-35
 Identities = 109/261 (41%), Positives = 135/261 (51%), Gaps = 26/261 (9%)
 Frame = +2

Query: 623  GSGSQSHGYQVG----GYNHLGDGGNYGAY-------AAPSFVPD-VPVENR---DFPGP 757
            G G   +GY  G    GY+  G GG  G Y       AAP+   D + V  R   DFP P
Sbjct: 8    GYGGYGYGYGYGYGGAGYDMAGYGGGGGGYYTSDPYNAAPAAYEDPLAVAGRRQHDFPAP 67

Query: 758  LMNGFEFQPMETCPKNFIIFDQTDNKSRVMFHPALAHNF--SYPSYDIHPSFPHEIGKNL 931
            L  G EFQP +TCPKN++IFDQT ++SRVMFHP+LA+N   S   YD H    +  G   
Sbjct: 68   L-TGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYG-GFEQ 125

Query: 932  DSAI---------DNQGKLSSSMKEDTEEIDALLCSXXXXXXXXVISTGHTPCNWRXXXX 1084
            D A          D  G  S   KEDT+EIDAL+ +        V+STG TP        
Sbjct: 126  DYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTP-------G 178

Query: 1085 XXXXXXXXXXXXKTIXXXXXXXXXXXXXXXXGRKRERMRKMVKALRQIIPGGEQLDTPAV 1264
                                            RK+ERM+KM++ L+ IIPGG+++DTPAV
Sbjct: 179  CRAGGSPDSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAV 238

Query: 1265 LDEAVRYLKSLKVEAKKLGIQ 1327
            LDEAVRYLKSLKVE KKLG++
Sbjct: 239  LDEAVRYLKSLKVEVKKLGVR 259


>gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
          Length = 263

 Score =  153 bits (387), Expect = 1e-34
 Identities = 109/259 (42%), Positives = 133/259 (51%), Gaps = 26/259 (10%)
 Frame = +2

Query: 623  GSGSQSHGYQVG----GYNHLGDGGNYGAY-------AAPSFVPD-VPVENR---DFPGP 757
            G G   +GY  G    GY+  G GG  G Y       AAP+   D + V  R   DFP P
Sbjct: 8    GYGGYGYGYGYGYGGAGYDMAGYGGGGGGYYTSDPYNAAPAAYEDPLAVAGRRQHDFPAP 67

Query: 758  LMNGFEFQPMETCPKNFIIFDQTDNKSRVMFHPALAHNF--SYPSYDIHPSFPHEIGKNL 931
            L  G EFQP +TCPKN++IFDQT ++SRVMFHP+LA+N   S   YD H    +  G   
Sbjct: 68   L-TGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYG-GFEQ 125

Query: 932  DSAI---------DNQGKLSSSMKEDTEEIDALLCSXXXXXXXXVISTGHTPCNWRXXXX 1084
            D A          D  G  S   KEDT+EIDAL+ +        V+STG TP        
Sbjct: 126  DYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTP-------G 178

Query: 1085 XXXXXXXXXXXXKTIXXXXXXXXXXXXXXXXGRKRERMRKMVKALRQIIPGGEQLDTPAV 1264
                                            RK+ERM+KM++ L+ IIPGG+++DTPAV
Sbjct: 179  CRAGGSPDSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAV 238

Query: 1265 LDEAVRYLKSLKVEAKKLG 1321
            LDEAVRYLKSLKVE KKLG
Sbjct: 239  LDEAVRYLKSLKVEVKKLG 257


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