BLASTX nr result

ID: Dioscorea21_contig00008937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008937
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isof...    75   6e-12
emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera]    75   6e-12
ref|NP_001046664.1| Os02g0315600 [Oryza sativa Japonica Group] g...    69   4e-10
ref|XP_002438592.1| hypothetical protein SORBIDRAFT_10g022460 [S...    68   1e-09
ref|XP_002437033.1| hypothetical protein SORBIDRAFT_10g019120 [S...    68   1e-09

>ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isoform 2 [Vitis vinifera]
           gi|225463440|ref|XP_002275365.1| PREDICTED:
           transcription factor bHLH144 isoform 1 [Vitis vinifera]
          Length = 244

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +1

Query: 13  GPMMNGFEFQPLETCPKNFIIFDQSDNKGRVMFHPALAQKFSYPSFDIHPTLAHNHGQNM 192
           GP  +G EFQP + CPKNFIIFDQ+D++ ++MFHPA+AQKF+ PS ++  T  HN   N+
Sbjct: 46  GPF-HGVEFQPSDVCPKNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHN---NL 101

Query: 193 EK 198
           EK
Sbjct: 102 EK 103



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +2

Query: 470 DRKRERMRKMVKALRGIIPGGDHLDTPAVLDEAVRYLKS 586
           +RKR++M+KMVKALRGI+PG   ++T AVLDEAVRYLKS
Sbjct: 189 ERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKS 227


>emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera]
          Length = 289

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +1

Query: 13  GPMMNGFEFQPLETCPKNFIIFDQSDNKGRVMFHPALAQKFSYPSFDIHPTLAHNHGQNM 192
           GP  +G EFQP + CPKNFIIFDQ+D++ ++MFHPA+AQKF+ PS ++  T  HN   N+
Sbjct: 91  GPF-HGVEFQPSDVCPKNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHN---NL 146

Query: 193 EK 198
           EK
Sbjct: 147 EK 148



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +2

Query: 470 DRKRERMRKMVKALRGIIPGGDHLDTPAVLDEAVRYLKS 586
           +RKR++M+KMVKALRGI+PG   ++T AVLDEAVRYLKS
Sbjct: 234 ERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKS 272


>ref|NP_001046664.1| Os02g0315600 [Oryza sativa Japonica Group]
           gi|46389916|dbj|BAD15700.1| unknown protein [Oryza
           sativa Japonica Group] gi|113536195|dbj|BAF08578.1|
           Os02g0315600 [Oryza sativa Japonica Group]
           gi|125539170|gb|EAY85565.1| hypothetical protein
           OsI_06938 [Oryza sativa Indica Group]
           gi|125581839|gb|EAZ22770.1| hypothetical protein
           OsJ_06445 [Oryza sativa Japonica Group]
           gi|215734958|dbj|BAG95680.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215741357|dbj|BAG97852.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215741414|dbj|BAG97909.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 254

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   HDFPGPMMNGFEFQPLETCPKNFIIFDQSDNKGRVMFHPALAQKF 135
           HDFP PM N  EFQP  TCPKN++IFDQ+  K RVMFHP+LA KF
Sbjct: 65  HDFPAPM-NELEFQPSATCPKNYVIFDQTCTKSRVMFHPSLAHKF 108



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +2

Query: 473 RKRERMRKMVKALRGIIPGGDHLDTPAVLDEAVRYLKS 586
           RK+ERM+KMV+ L+GIIPGG+ +DTPAVLDEAVRYLKS
Sbjct: 202 RKKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYLKS 239


>ref|XP_002438592.1| hypothetical protein SORBIDRAFT_10g022460 [Sorghum bicolor]
           gi|241916815|gb|EER89959.1| hypothetical protein
           SORBIDRAFT_10g022460 [Sorghum bicolor]
          Length = 270

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +2

Query: 470 DRKRERMRKMVKALRGIIPGGDHLDTPAVLDEAVRYLKS 586
           ++K+ERM+KMV+ L+GIIPGGD +DTPAVLDEAVRYLKS
Sbjct: 217 EKKKERMKKMVRTLKGIIPGGDRMDTPAVLDEAVRYLKS 255



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +1

Query: 1   HDFPGPMMNGFEFQPLETCPKNFIIFDQSDNKGRVMFHPALAQKF 135
           HDFP P+  G EFQP +TCPKN++IFDQ+ ++ RVMFHP+LA  F
Sbjct: 68  HDFPAPL-TGLEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNF 111


>ref|XP_002437033.1| hypothetical protein SORBIDRAFT_10g019120 [Sorghum bicolor]
           gi|241915256|gb|EER88400.1| hypothetical protein
           SORBIDRAFT_10g019120 [Sorghum bicolor]
          Length = 233

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +2

Query: 470 DRKRERMRKMVKALRGIIPGGDHLDTPAVLDEAVRYLKS 586
           ++K+ERM+KMV+ L+GIIPGGD +DTPAVLDEAVRYLKS
Sbjct: 180 EKKKERMKKMVRTLKGIIPGGDRMDTPAVLDEAVRYLKS 218



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +1

Query: 4   DFPGPMMNGFEFQPLETCPKNFIIFDQSDNKGRVMFHPALAQKF 135
           DFP P+  G EFQP +TCPKN++IFDQ+ ++ RVMFHP+LA  F
Sbjct: 35  DFPAPL-TGLEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNF 77


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