BLASTX nr result

ID: Dioscorea21_contig00008920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008920
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]             149   5e-34
ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33
ref|XP_002530915.1| RNA binding protein, putative [Ricinus commu...   145   1e-32
ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein ...   144   2e-32
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g...   144   2e-32

>gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
          Length = 139

 Score =  149 bits (377), Expect = 5e-34
 Identities = 76/110 (69%), Positives = 84/110 (76%)
 Frame = +1

Query: 112 ALTAGRSGIMRFSTXXXXXXXXXXXXXXXXXXNTNLFVSGLSKRTTSEGLREAFAKFGEV 291
           A +  R+G  R  +                  NTNLFVSGLSKRTT+EGLREAFAKFGEV
Sbjct: 3   AASVARNGFRRMFSISAFAPPPPAVPKPPADPNTNLFVSGLSKRTTTEGLREAFAKFGEV 62

Query: 292 ISARVVTDRVSGYSKGFGFVRYATLEDAAKGIEGMDGKFLDGWVIFAEYA 441
           + ARVVTDRVSGYSKGFGFV+YATLEDAA+GI+GMDGKFLDGWVIFAEYA
Sbjct: 63  VHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGKFLDGWVIFAEYA 112


>ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  146 bits (369), Expect = 4e-33
 Identities = 70/78 (89%), Positives = 77/78 (98%)
 Frame = +1

Query: 208 NTNLFVSGLSKRTTSEGLREAFAKFGEVISARVVTDRVSGYSKGFGFVRYATLEDAAKGI 387
           NTNLFVSGLSKRTTSEGL+EAF+KFGEV+ ARVVTDRVSGYSKGFGFV+YATLEDAA+GI
Sbjct: 54  NTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGI 113

Query: 388 EGMDGKFLDGWVIFAEYA 441
           +GMDG+FLDGWVIFAEYA
Sbjct: 114 KGMDGQFLDGWVIFAEYA 131


>ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
           gi|223529509|gb|EEF31464.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 354

 Score =  145 bits (366), Expect = 1e-32
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +1

Query: 208 NTNLFVSGLSKRTTSEGLREAFAKFGEVISARVVTDRVSGYSKGFGFVRYATLEDAAKGI 387
           NTNLFVSGLSKRTT+EGL++AF+KFGEV+ ARVVTDRVSGYSKGFGFVRY +LEDA KGI
Sbjct: 51  NTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGI 110

Query: 388 EGMDGKFLDGWVIFAEYA 441
           EGMDGKFLDGWVIFAEYA
Sbjct: 111 EGMDGKFLDGWVIFAEYA 128


>ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 145

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = +1

Query: 208 NTNLFVSGLSKRTTSEGLREAFAKFGEVISARVVTDRVSGYSKGFGFVRYATLEDAAKGI 387
           NTNLFVSGLSKRT +E LRE FAKFGEV+ ARVVTDRVSGYSKGFGFV+YAT+EDAAKGI
Sbjct: 48  NTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGI 107

Query: 388 EGMDGKFLDGWVIFAEYA 441
           EGMDGKFLDGWVIFAEYA
Sbjct: 108 EGMDGKFLDGWVIFAEYA 125


>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
           gi|38636774|dbj|BAD03017.1| putative RNA recognition
           motif (RRM)-containing protein [Oryza sativa Japonica
           Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
           sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639884|gb|EEE68016.1| hypothetical protein
           OsJ_25986 [Oryza sativa Japonica Group]
          Length = 141

 Score =  144 bits (363), Expect = 2e-32
 Identities = 73/110 (66%), Positives = 82/110 (74%)
 Frame = +1

Query: 112 ALTAGRSGIMRFSTXXXXXXXXXXXXXXXXXXNTNLFVSGLSKRTTSEGLREAFAKFGEV 291
           A    RSG  R  +                  + NLF+SGLSKRTT++GL+EAFAKFGEV
Sbjct: 3   AAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEV 62

Query: 292 ISARVVTDRVSGYSKGFGFVRYATLEDAAKGIEGMDGKFLDGWVIFAEYA 441
           I ARVVTDRV+G+SKGFGFVRYAT+EDAAKGIEGMDGKFLDGWVIFAEYA
Sbjct: 63  IHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKFLDGWVIFAEYA 112


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