BLASTX nr result
ID: Dioscorea21_contig00008920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008920 (781 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEO34351.1| hypothetical protein [Amblyomma maculatum] 149 5e-34 ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2... 146 4e-33 ref|XP_002530915.1| RNA binding protein, putative [Ricinus commu... 145 1e-32 ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein ... 144 2e-32 ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g... 144 2e-32 >gb|AEO34351.1| hypothetical protein [Amblyomma maculatum] Length = 139 Score = 149 bits (377), Expect = 5e-34 Identities = 76/110 (69%), Positives = 84/110 (76%) Frame = +1 Query: 112 ALTAGRSGIMRFSTXXXXXXXXXXXXXXXXXXNTNLFVSGLSKRTTSEGLREAFAKFGEV 291 A + R+G R + NTNLFVSGLSKRTT+EGLREAFAKFGEV Sbjct: 3 AASVARNGFRRMFSISAFAPPPPAVPKPPADPNTNLFVSGLSKRTTTEGLREAFAKFGEV 62 Query: 292 ISARVVTDRVSGYSKGFGFVRYATLEDAAKGIEGMDGKFLDGWVIFAEYA 441 + ARVVTDRVSGYSKGFGFV+YATLEDAA+GI+GMDGKFLDGWVIFAEYA Sbjct: 63 VHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGKFLDGWVIFAEYA 112 >ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa] Length = 153 Score = 146 bits (369), Expect = 4e-33 Identities = 70/78 (89%), Positives = 77/78 (98%) Frame = +1 Query: 208 NTNLFVSGLSKRTTSEGLREAFAKFGEVISARVVTDRVSGYSKGFGFVRYATLEDAAKGI 387 NTNLFVSGLSKRTTSEGL+EAF+KFGEV+ ARVVTDRVSGYSKGFGFV+YATLEDAA+GI Sbjct: 54 NTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGI 113 Query: 388 EGMDGKFLDGWVIFAEYA 441 +GMDG+FLDGWVIFAEYA Sbjct: 114 KGMDGQFLDGWVIFAEYA 131 >ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis] gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis] Length = 354 Score = 145 bits (366), Expect = 1e-32 Identities = 69/78 (88%), Positives = 75/78 (96%) Frame = +1 Query: 208 NTNLFVSGLSKRTTSEGLREAFAKFGEVISARVVTDRVSGYSKGFGFVRYATLEDAAKGI 387 NTNLFVSGLSKRTT+EGL++AF+KFGEV+ ARVVTDRVSGYSKGFGFVRY +LEDA KGI Sbjct: 51 NTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGI 110 Query: 388 EGMDGKFLDGWVIFAEYA 441 EGMDGKFLDGWVIFAEYA Sbjct: 111 EGMDGKFLDGWVIFAEYA 128 >ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Glycine max] Length = 145 Score = 144 bits (363), Expect = 2e-32 Identities = 70/78 (89%), Positives = 74/78 (94%) Frame = +1 Query: 208 NTNLFVSGLSKRTTSEGLREAFAKFGEVISARVVTDRVSGYSKGFGFVRYATLEDAAKGI 387 NTNLFVSGLSKRT +E LRE FAKFGEV+ ARVVTDRVSGYSKGFGFV+YAT+EDAAKGI Sbjct: 48 NTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGI 107 Query: 388 EGMDGKFLDGWVIFAEYA 441 EGMDGKFLDGWVIFAEYA Sbjct: 108 EGMDGKFLDGWVIFAEYA 125 >ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza sativa Japonica Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group] gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group] gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group] Length = 141 Score = 144 bits (363), Expect = 2e-32 Identities = 73/110 (66%), Positives = 82/110 (74%) Frame = +1 Query: 112 ALTAGRSGIMRFSTXXXXXXXXXXXXXXXXXXNTNLFVSGLSKRTTSEGLREAFAKFGEV 291 A RSG R + + NLF+SGLSKRTT++GL+EAFAKFGEV Sbjct: 3 AAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEV 62 Query: 292 ISARVVTDRVSGYSKGFGFVRYATLEDAAKGIEGMDGKFLDGWVIFAEYA 441 I ARVVTDRV+G+SKGFGFVRYAT+EDAAKGIEGMDGKFLDGWVIFAEYA Sbjct: 63 IHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKFLDGWVIFAEYA 112