BLASTX nr result

ID: Dioscorea21_contig00008916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008916
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24384.3| unnamed protein product [Vitis vinifera]              274   4e-71
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258...   274   5e-71
ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group] g...   271   4e-70
ref|NP_001148086.1| LOC100281694 [Zea mays] gi|195615710|gb|ACG2...   267   4e-69
ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243...   265   2e-68

>emb|CBI24384.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  274 bits (701), Expect = 4e-71
 Identities = 140/267 (52%), Positives = 179/267 (67%)
 Frame = +1

Query: 61  ASSETLTMASKKRKADQESDLLPQSVHNHQEPVEDELFDEDEDIGKLLEPLSREQLVDLL 240
           A  E    A  + + ++E +   +      +  +DE   EDE+I KLLEP S+EQL+ LL
Sbjct: 88  AEDEPKHEAQGEEEEEEEGEGEEEEEEEGDQEGDDEGDVEDEEIEKLLEPFSKEQLLALL 147

Query: 241 RRAATSDPAILSEIQRLADADPAHRKLFVHGLGWETTTDTLRSMFSRYGELDDCRVVVDK 420
           R A    P  +  ++RLADADPAHRK+FVHGLGW+TT +TL S+F +YGE++DC+ V DK
Sbjct: 148 REAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDK 207

Query: 421 GSGRSKGYGFVLFHHRRSARAALRQPQKLIEGRMTACQLASAGXXXXXXXXXXXXXXXXX 600
            SG+SKGY F+LF HR  AR AL+QPQK I  RMT+CQLASAG                 
Sbjct: 208 ISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAG------PVPAPPPVVPP 261

Query: 601 XHDNLPRKIYVGNVHSDIDGSRLRSFFARYGEIEEGPIGFDRQTGKPKGFALFVYKTLEG 780
             +   RKI+V NV S+ID  +L  FFA++GEIEEGP+G D+ TGKPKGFALFVYK++E 
Sbjct: 262 VSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIES 321

Query: 781 ARKALEEPNKNFEGHILFCQKATDSNK 861
           +R+ALEEP+K FEGH L CQKA D  K
Sbjct: 322 SRRALEEPHKIFEGHTLHCQKAIDGPK 348


>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
           vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
           uncharacterized protein LOC100258161 isoform 2 [Vitis
           vinifera] gi|147853236|emb|CAN80681.1| hypothetical
           protein VITISV_037734 [Vitis vinifera]
          Length = 478

 Score =  274 bits (700), Expect = 5e-71
 Identities = 137/234 (58%), Positives = 168/234 (71%)
 Frame = +1

Query: 160 EDELFDEDEDIGKLLEPLSREQLVDLLRRAATSDPAILSEIQRLADADPAHRKLFVHGLG 339
           EDE   EDE+I KLLEP S+EQL+ LLR A    P  +  ++RLADADPAHRK+FVHGLG
Sbjct: 106 EDEGDVEDEEIEKLLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLG 165

Query: 340 WETTTDTLRSMFSRYGELDDCRVVVDKGSGRSKGYGFVLFHHRRSARAALRQPQKLIEGR 519
           W+TT +TL S+F +YGE++DC+ V DK SG+SKGY F+LF HR  AR AL+QPQK I  R
Sbjct: 166 WDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNR 225

Query: 520 MTACQLASAGXXXXXXXXXXXXXXXXXXHDNLPRKIYVGNVHSDIDGSRLRSFFARYGEI 699
           MT+CQLASAG                   +   RKI+V NV S+ID  +L  FFA++GEI
Sbjct: 226 MTSCQLASAG------PVPAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEI 279

Query: 700 EEGPIGFDRQTGKPKGFALFVYKTLEGARKALEEPNKNFEGHILFCQKATDSNK 861
           EEGP+G D+ TGKPKGFALFVYK++E +R+ALEEP+K FEGH L CQKA D  K
Sbjct: 280 EEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEPHKIFEGHTLHCQKAIDGPK 333


>ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group]
            gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa
            Japonica Group] gi|113565593|dbj|BAF15936.1| Os04g0636900
            [Oryza sativa Japonica Group]
            gi|215715302|dbj|BAG95053.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215764985|dbj|BAG86682.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 515

 Score =  271 bits (692), Expect = 4e-70
 Identities = 163/361 (45%), Positives = 200/361 (55%), Gaps = 61/361 (16%)
 Frame = +1

Query: 82   MASKKRKADQESDLLPQS-----VHNHQEPVEDELF------------------------ 174
            MA KKRKAD     +  S      ++HQE    EL                         
Sbjct: 1    MAPKKRKADPAESPVASSEAGAGTNHHQETPSSELKPRGTIYFPITDDPPEPSAEGGAEG 60

Query: 175  -------DEDEDIGKLLEPLSREQLVDLLRRAATSDPAILSEIQRLADADPAHRKLFVHG 333
                   D++EDI KLLEPLSREQLV LLR AA + PA ++ ++R A+ADPA RKLFVHG
Sbjct: 61   EDGAGGDDDEEDIAKLLEPLSREQLVALLRTAAETTPATMAAVRRAAEADPASRKLFVHG 120

Query: 334  LGWETTTDTLRSMFSRYGELDDCRVVVDKGSGRSKGYGFVLFHHRRSARAALRQPQKLIE 513
            LGW    D LRS FSR+GEL+DCRV+ DK SGRSKGYGFVLF  RRSA  ALR+PQ  I 
Sbjct: 121  LGWGAGADDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIG 180

Query: 514  GRMTACQLASAGXXXXXXXXXXXXXXXXXXH--------------DNLPRKIYVGNVHSD 651
            GR+  C LA++G                                 DN+ RKI+VGNVH+D
Sbjct: 181  GRLAFCHLAASGPAPPTSQSQNPSSNTNANSGAANNAGSASSSQPDNMQRKIFVGNVHAD 240

Query: 652  IDGSRLRSFFARYGEIEEGPIGFDRQTGKPKGFALFVYKTLEGARKALEEPNKNFEGHIL 831
            +D  RL  +F+++GEIEEGP+GFD+ TGKPKGFALFVYK++E AR+ALEEP +NF+G +L
Sbjct: 241  VDVDRLYEYFSQFGEIEEGPLGFDKTTGKPKGFALFVYKSVESARRALEEPTRNFDGKML 300

Query: 832  FCQKATD----------SNKSRXXXXXXXXXXXXXXXMAAVPIGNAGGYDAPGFGAT-VP 978
              QKA D          +N +                M A        YDA  +GAT VP
Sbjct: 301  NVQKAIDGRTKNTPGMNANSNPSGTAASAAAAAAAAQMTAPATAAITPYDASAYGATAVP 360

Query: 979  D 981
            D
Sbjct: 361  D 361


>ref|NP_001148086.1| LOC100281694 [Zea mays] gi|195615710|gb|ACG29685.1| RNA-binding
            protein AKIP1 [Zea mays] gi|413919663|gb|AFW59595.1|
            RNA-binding protein AKIP1 isoform 1 [Zea mays]
            gi|413919664|gb|AFW59596.1| RNA-binding protein AKIP1
            isoform 2 [Zea mays]
          Length = 521

 Score =  267 bits (683), Expect = 4e-69
 Identities = 171/414 (41%), Positives = 209/414 (50%), Gaps = 64/414 (15%)
 Frame = +1

Query: 82   MASKKRKAD--QESDLLPQSVHNH-QEPV------------------------------- 159
            MA KKRKAD  + +D    +  NH QEP                                
Sbjct: 1    MAPKKRKADPAESADAAEAAAGNHRQEPAPSEPKPRATIYFPITDDPPEPAAEEDEEDGA 60

Query: 160  -EDELFDEDEDIGKLLEPLSREQLVDLLRRAATSDPAILSEIQRLADADPAHRKLFVHGL 336
             EDE  D+ EDIGKLLEPLSREQLV LLR AA + PA ++ ++R  ++DPA RKLFVHGL
Sbjct: 61   GEDE--DDVEDIGKLLEPLSREQLVALLRTAAETSPATMAAVRRAVESDPASRKLFVHGL 118

Query: 337  GWETTTDTLRSMFSRYGELDDCRVVVDKGSGRSKGYGFVLFHHRRSARAALRQPQKLIEG 516
            GW  + + LRS FS +GEL+DCRV+ DK SGRSKGYGFVLF  RRSA  AL +PQ  I G
Sbjct: 119  GWGASAEDLRSAFSCFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALSRPQLQIGG 178

Query: 517  RMTACQLASAG------------------XXXXXXXXXXXXXXXXXXHDNLPRKIYVGNV 642
            R+  C LA++G                                     DN+PRKI+VGNV
Sbjct: 179  RLAFCHLAASGPAPPASQSQNPSSNPNTNANSNSNTTTNASGSSSSQPDNMPRKIFVGNV 238

Query: 643  HSDIDGSRLRSFFARYGEIEEGPIGFDRQTGKPKGFALFVYKTLEGARKALEEPNKNFEG 822
            H+D+D  RL ++FA++GEIEEGP GFD+ TGKPKGFALFVYK++E AR+ALEEP KNF+G
Sbjct: 239  HADVDVDRLYNYFAQFGEIEEGPFGFDKNTGKPKGFALFVYKSVESARRALEEPMKNFDG 298

Query: 823  HILFCQKA----------TDSNKSRXXXXXXXXXXXXXXXMAAVPIGNAGGYDAPGFGAT 972
              L  QKA          T++N +                M A        YD   +GAT
Sbjct: 299  KTLNVQKAIDGRTKGSSGTNTNANSNPTTASVAAAAAAAQMTAPATAAISPYDPSAYGAT 358

Query: 973  -VPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGINPAMLAQFNP 1131
             VPD                                      G+ PAM A  NP
Sbjct: 359  AVPDMSFAQQAAMLGFGAQQQAFAQPNAMLAMIAAMQNPAALGMTPAMFAAMNP 412


>ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243393 [Vitis vinifera]
          Length = 463

 Score =  265 bits (678), Expect = 2e-68
 Identities = 132/237 (55%), Positives = 167/237 (70%), Gaps = 2/237 (0%)
 Frame = +1

Query: 157 VEDELFDEDEDIGKLLEPLSREQLVDLLRRAATSDPAILSEIQRLADADPAHRKLFVHGL 336
           V+D+  D++E I K+LEP S++QL++LLR AA     +   ++R+AD DP HRK+FVHGL
Sbjct: 68  VDDD--DDEEPIQKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIFVHGL 125

Query: 337 GWETTTDTLRSMFSRYGELDDCRVVVDKGSGRSKGYGFVLFHHRRSARAALRQPQKLIEG 516
           GW+T  +TL S+F  YGE++DCR V DK SG+SKGYGF+LF  R  AR AL+QPQK I  
Sbjct: 126 GWDTNAETLISVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQKKIGN 185

Query: 517 RMTACQLASAG--XXXXXXXXXXXXXXXXXXHDNLPRKIYVGNVHSDIDGSRLRSFFARY 690
           RMTACQLAS G                     +   RKIYV NV +++D  +L  FF++Y
Sbjct: 186 RMTACQLASIGPVPSPAVGQAAMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVFFSKY 245

Query: 691 GEIEEGPIGFDRQTGKPKGFALFVYKTLEGARKALEEPNKNFEGHILFCQKATDSNK 861
           GEIEEGP+G D+QTGKPKGF LFVYKT EGA+KAL+EP+KNF+GHIL CQKA D  K
Sbjct: 246 GEIEEGPLGLDKQTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKAIDGPK 302


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