BLASTX nr result

ID: Dioscorea21_contig00008898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008898
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67...   216   6e-54
ref|XP_002453878.1| hypothetical protein SORBIDRAFT_04g020510 [S...   204   3e-50
ref|NP_001046914.1| Os02g0504900 [Oryza sativa Japonica Group] g...   201   2e-49
gb|EAZ23161.1| hypothetical protein OsJ_06846 [Oryza sativa Japo...   201   3e-49
gb|EAY85972.1| hypothetical protein OsI_07338 [Oryza sativa Indi...   201   3e-49

>ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67480 [Vitis vinifera]
           gi|297738424|emb|CBI27625.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  216 bits (551), Expect = 6e-54
 Identities = 110/194 (56%), Positives = 131/194 (67%)
 Frame = -2

Query: 582 MPCLVSAKKWLPESEMCFSGAIPNSSVSCARILTRLTPQASLESYCPILPGLPDDVAKFC 403
           MP +V+ KK   +S MC S ++   +++ ++    LT Q + +SY PILPGLPDDVAK+C
Sbjct: 1   MPGIVAGKKRFTQSNMCLSNSVQQDTLTLSKSNPCLTSQFADDSYGPILPGLPDDVAKYC 60

Query: 402 LALVPRSYFPVMGTVCKRWTSFIQSSEFVAVRKQAGKLEEWLYILTADANGKGSHWEVLA 223
           LALVPRS FP MG V K+W SFI+S EF+ VRK AG LEEWLY+LT DA GKGSHWEVL 
Sbjct: 61  LALVPRSNFPAMGGVSKKWRSFIRSKEFITVRKLAGMLEEWLYVLTMDAEGKGSHWEVLD 120

Query: 222 NFGNKRHLVPPMPGPVKTXXXXXXXXXXXXXXXGYVVDNGTDCVSSDVYQYDSRLNRWSM 43
             G+K  L+PPMPGPVKT               G  V   T   S+DVYQYDS LN WS 
Sbjct: 121 CLGHKHQLLPPMPGPVKTGFEVVVLNGKLLVMAGCSVVGRTGSASADVYQYDSCLNSWSK 180

Query: 42  LSKMNVARYDFACA 1
           L+ MNVARYDFACA
Sbjct: 181 LANMNVARYDFACA 194


>ref|XP_002453878.1| hypothetical protein SORBIDRAFT_04g020510 [Sorghum bicolor]
           gi|241933709|gb|EES06854.1| hypothetical protein
           SORBIDRAFT_04g020510 [Sorghum bicolor]
          Length = 383

 Score =  204 bits (519), Expect = 3e-50
 Identities = 97/191 (50%), Positives = 127/191 (66%)
 Frame = -2

Query: 573 LVSAKKWLPESEMCFSGAIPNSSVSCARILTRLTPQASLESYCPILPGLPDDVAKFCLAL 394
           L  +++ L  S+ CF   +     +  ++ + L PQ   +SYC ++PGLP+D+AK CLAL
Sbjct: 2   LAVSQEHLAHSQTCFRARMQLKPPTRPKLYSGLMPQEEFDSYCDLIPGLPEDLAKICLAL 61

Query: 393 VPRSYFPVMGTVCKRWTSFIQSSEFVAVRKQAGKLEEWLYILTADANGKGSHWEVLANFG 214
           VPR++FPVMG V KRW SF++S E +AVRK+ GKLEEW+Y+LT DA  KGSHWE+L   G
Sbjct: 62  VPRTHFPVMGAVSKRWMSFLESKELIAVRKEVGKLEEWVYVLTPDAGAKGSHWEILECSG 121

Query: 213 NKRHLVPPMPGPVKTXXXXXXXXXXXXXXXGYVVDNGTDCVSSDVYQYDSRLNRWSMLSK 34
            K+  +P MPG  K                GY  D+G DCVS +VYQYDS LNRW++L+K
Sbjct: 122 QKQSPLPRMPGLTKAGFGVVVIGGKLFIIAGYSADHGKDCVSDEVYQYDSCLNRWTVLAK 181

Query: 33  MNVARYDFACA 1
           MNVAR DFACA
Sbjct: 182 MNVARCDFACA 192


>ref|NP_001046914.1| Os02g0504900 [Oryza sativa Japonica Group]
           gi|48716191|dbj|BAD23231.1| kelch repeat-containing
           F-box protein-like [Oryza sativa Japonica Group]
           gi|113536445|dbj|BAF08828.1| Os02g0504900 [Oryza sativa
           Japonica Group]
          Length = 385

 Score =  201 bits (512), Expect = 2e-49
 Identities = 99/194 (51%), Positives = 124/194 (63%)
 Frame = -2

Query: 582 MPCLVSAKKWLPESEMCFSGAIPNSSVSCARILTRLTPQASLESYCPILPGLPDDVAKFC 403
           M  LV  +    +S+      +   + + A+      P    ++YC ++PGLP+D+AK C
Sbjct: 1   MLTLVGTRDSFAQSQAQLCAGMQLKAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKIC 60

Query: 402 LALVPRSYFPVMGTVCKRWTSFIQSSEFVAVRKQAGKLEEWLYILTADANGKGSHWEVLA 223
           LALVPRS FPVMG+V KRW SF++S EF+AVRK+ GKLEEW+Y+LTADA  KGSHWEVL 
Sbjct: 61  LALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLG 120

Query: 222 NFGNKRHLVPPMPGPVKTXXXXXXXXXXXXXXXGYVVDNGTDCVSSDVYQYDSRLNRWSM 43
             G K   +PPMPGP K                GY  D+G +CVS +VY+YDS LNRW  
Sbjct: 121 CSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVE 180

Query: 42  LSKMNVARYDFACA 1
           LSKMNVAR DFACA
Sbjct: 181 LSKMNVARCDFACA 194


>gb|EAZ23161.1| hypothetical protein OsJ_06846 [Oryza sativa Japonica Group]
          Length = 364

 Score =  201 bits (510), Expect = 3e-49
 Identities = 94/157 (59%), Positives = 112/157 (71%)
 Frame = -2

Query: 471 PQASLESYCPILPGLPDDVAKFCLALVPRSYFPVMGTVCKRWTSFIQSSEFVAVRKQAGK 292
           P    ++YC ++PGLP+D+AK CLALVPRS FPVMG+V KRW SF++S EF+AVRK+ GK
Sbjct: 17  PIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGK 76

Query: 291 LEEWLYILTADANGKGSHWEVLANFGNKRHLVPPMPGPVKTXXXXXXXXXXXXXXXGYVV 112
           LEEW+Y+LTADA  KGSHWEVL   G K   +PPMPGP K                GY  
Sbjct: 77  LEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAA 136

Query: 111 DNGTDCVSSDVYQYDSRLNRWSMLSKMNVARYDFACA 1
           D+G +CVS +VY+YDS LNRW  LSKMNVAR DFACA
Sbjct: 137 DHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACA 173


>gb|EAY85972.1| hypothetical protein OsI_07338 [Oryza sativa Indica Group]
          Length = 364

 Score =  201 bits (510), Expect = 3e-49
 Identities = 94/157 (59%), Positives = 112/157 (71%)
 Frame = -2

Query: 471 PQASLESYCPILPGLPDDVAKFCLALVPRSYFPVMGTVCKRWTSFIQSSEFVAVRKQAGK 292
           P    ++YC ++PGLP+D+AK CLALVPRS FPVMG+V KRW SF++S EF+AVRK+ GK
Sbjct: 17  PIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGK 76

Query: 291 LEEWLYILTADANGKGSHWEVLANFGNKRHLVPPMPGPVKTXXXXXXXXXXXXXXXGYVV 112
           LEEW+Y+LTADA  KGSHWEVL   G K   +PPMPGP K                GY  
Sbjct: 77  LEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIAGYAA 136

Query: 111 DNGTDCVSSDVYQYDSRLNRWSMLSKMNVARYDFACA 1
           D+G +CVS +VY+YDS LNRW  LSKMNVAR DFACA
Sbjct: 137 DHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACA 173


Top