BLASTX nr result

ID: Dioscorea21_contig00008864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008864
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566382.1| PREDICTED: seryl-tRNA synthetase-like [Brach...   289   e-106
ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays] g...   291   e-105
ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [S...   289   e-105
ref|NP_001049278.1| Os03g0198400 [Oryza sativa Japonica Group] g...   289   e-104
gb|ACF84667.1| unknown [Zea mays] gi|195621762|gb|ACG32711.1| se...   288   e-104

>ref|XP_003566382.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 456

 Score =  289 bits (739), Expect(2) = e-106
 Identities = 131/152 (86%), Positives = 145/152 (95%)
 Frame = -1

Query: 1207 RKYVPMQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIY 1028
            R Y PMQTPFFMRK+ MG+CAQLAQFDEELYKVTG+G++KYLIAT+EQPLCAYHL DRIY
Sbjct: 191  RGYTPMQTPFFMRKETMGRCAQLAQFDEELYKVTGDGEEKYLIATSEQPLCAYHLGDRIY 250

Query: 1027 PQDLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEMLK 848
            P DLPIRYAGYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFC+TSPNDN+SWE+HEEM+K
Sbjct: 251  PADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNNSWELHEEMIK 310

Query: 847  NSEDFYKELNLPYQVVAIVSGALNDAAAKKYD 752
            NSEDFYKE+ LPYQ+V+IVSGALNDAAAKKYD
Sbjct: 311  NSEDFYKEIGLPYQLVSIVSGALNDAAAKKYD 342



 Score =  123 bits (309), Expect(2) = e-106
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = -3

Query: 635 RRLGIGFGQKKNDEQAKQYVHMLNSTLTATERTICCILENYQREDGVEIPQVLRPFMGGQ 456
           RRLGIGFGQKKNDEQ+KQ+VHMLNSTLTATERT+CCILENYQ+EDGVE+P+ LRPFMGG 
Sbjct: 368 RRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILENYQKEDGVEVPKALRPFMGGI 427

Query: 455 EFISFKLAPDT 423
           +F+ FK   D+
Sbjct: 428 DFLPFKKPLDS 438


>ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays]
            gi|194700466|gb|ACF84317.1| unknown [Zea mays]
            gi|414591450|tpg|DAA42021.1| TPA: seryl-tRNA synthetase
            isoform 1 [Zea mays] gi|414591451|tpg|DAA42022.1| TPA:
            seryl-tRNA synthetase isoform 2 [Zea mays]
            gi|414591452|tpg|DAA42023.1| TPA: seryl-tRNA synthetase
            isoform 3 [Zea mays]
          Length = 458

 Score =  291 bits (744), Expect(2) = e-105
 Identities = 134/154 (87%), Positives = 146/154 (94%)
 Frame = -1

Query: 1213 RERKYVPMQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDR 1034
            R+R + PMQTPFFMRK+ M KCAQLAQFDEELYKVTG+G+DKYLIAT+EQPLCAYHL DR
Sbjct: 191  RKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATSEQPLCAYHLGDR 250

Query: 1033 IYPQDLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEM 854
            IYP +LPI+YAGYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFCITSPNDNDSWEMHEEM
Sbjct: 251  IYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSPNDNDSWEMHEEM 310

Query: 853  LKNSEDFYKELNLPYQVVAIVSGALNDAAAKKYD 752
            LKNSED+YKE+ LPYQVV+IVSGALNDAAAKKYD
Sbjct: 311  LKNSEDYYKEIGLPYQVVSIVSGALNDAAAKKYD 344



 Score =  119 bits (297), Expect(2) = e-105
 Identities = 52/66 (78%), Positives = 63/66 (95%)
 Frame = -3

Query: 635 RRLGIGFGQKKNDEQAKQYVHMLNSTLTATERTICCILENYQREDGVEIPQVLRPFMGGQ 456
           RRLGIG+GQKKNDEQ+KQ+VHMLNSTLTATERT+CCILEN+Q+EDGVE+P+ L+P+MGG 
Sbjct: 370 RRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKALQPYMGGI 429

Query: 455 EFISFK 438
           EF+ FK
Sbjct: 430 EFLPFK 435


>ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor]
            gi|241922186|gb|EER95330.1| hypothetical protein
            SORBIDRAFT_01g043930 [Sorghum bicolor]
          Length = 458

 Score =  289 bits (740), Expect(2) = e-105
 Identities = 134/154 (87%), Positives = 145/154 (94%)
 Frame = -1

Query: 1213 RERKYVPMQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDR 1034
            R+R + PMQTPFFMRK+ M KCAQLAQFDEELYKVTG+G+DKYLIAT+EQPLCAYHL DR
Sbjct: 191  RKRGFEPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATSEQPLCAYHLGDR 250

Query: 1033 IYPQDLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEM 854
            IYP +LPI+YAGYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFCITSPN NDSWEMHEEM
Sbjct: 251  IYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSPNGNDSWEMHEEM 310

Query: 853  LKNSEDFYKELNLPYQVVAIVSGALNDAAAKKYD 752
            LKNSEDFYKE+ LPYQVV+IVSGALNDAAAKKYD
Sbjct: 311  LKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYD 344



 Score =  119 bits (297), Expect(2) = e-105
 Identities = 52/66 (78%), Positives = 63/66 (95%)
 Frame = -3

Query: 635 RRLGIGFGQKKNDEQAKQYVHMLNSTLTATERTICCILENYQREDGVEIPQVLRPFMGGQ 456
           RRLGIG+GQKKNDEQ+KQ+VHMLNSTLTATERT+CCILEN+Q+EDGVE+P+ L+P+MGG 
Sbjct: 370 RRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKALQPYMGGI 429

Query: 455 EFISFK 438
           EF+ FK
Sbjct: 430 EFLPFK 435


>ref|NP_001049278.1| Os03g0198400 [Oryza sativa Japonica Group]
            gi|108706679|gb|ABF94474.1| Seryl-tRNA synthetase,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113547749|dbj|BAF11192.1| Os03g0198400 [Oryza sativa
            Japonica Group] gi|215736959|dbj|BAG95888.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|215765322|dbj|BAG87019.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222624378|gb|EEE58510.1|
            hypothetical protein OsJ_09790 [Oryza sativa Japonica
            Group]
          Length = 445

 Score =  289 bits (739), Expect(2) = e-104
 Identities = 131/154 (85%), Positives = 147/154 (95%)
 Frame = -1

Query: 1213 RERKYVPMQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDR 1034
            R+R + PMQTPFFMRK+ MGKCAQLAQFDEELYK+TG+G++KYLIAT+EQPLCAYHL DR
Sbjct: 189  RKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATSEQPLCAYHLGDR 248

Query: 1033 IYPQDLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEM 854
            IYP +LPIRYAGYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFC+TSPNDN+SWEMHEEM
Sbjct: 249  IYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEM 308

Query: 853  LKNSEDFYKELNLPYQVVAIVSGALNDAAAKKYD 752
            +KNSEDFYKE+ LPYQ+V+IVSGALNDAAAKKYD
Sbjct: 309  IKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYD 342



 Score =  118 bits (296), Expect(2) = e-104
 Identities = 52/67 (77%), Positives = 64/67 (95%)
 Frame = -3

Query: 635 RRLGIGFGQKKNDEQAKQYVHMLNSTLTATERTICCILENYQREDGVEIPQVLRPFMGGQ 456
           RRLGIG+GQKKNDEQ+KQ+VHMLNSTLTATERT+CCILEN+QRE+GVE+P+ L+P+MGG 
Sbjct: 368 RRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQRENGVEVPKALQPYMGGI 427

Query: 455 EFISFKL 435
           +F+ FKL
Sbjct: 428 DFLPFKL 434


>gb|ACF84667.1| unknown [Zea mays] gi|195621762|gb|ACG32711.1| seryl-tRNA synthetase
            [Zea mays]
          Length = 458

 Score =  288 bits (736), Expect(2) = e-104
 Identities = 133/154 (86%), Positives = 145/154 (94%)
 Frame = -1

Query: 1213 RERKYVPMQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDR 1034
            R+R + PMQTPFFMRK+ M KCAQLAQFDEELYKVTG+G+DKYLIAT+EQPLCAYHL DR
Sbjct: 191  RKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATSEQPLCAYHLGDR 250

Query: 1033 IYPQDLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEM 854
            IYP +LPI+YAGYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFCITSPN NDSWE+HEEM
Sbjct: 251  IYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSPNGNDSWEIHEEM 310

Query: 853  LKNSEDFYKELNLPYQVVAIVSGALNDAAAKKYD 752
            LKNSEDFYKE+ LPYQVV+IVSGALNDAAAKKYD
Sbjct: 311  LKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYD 344



 Score =  119 bits (297), Expect(2) = e-104
 Identities = 52/66 (78%), Positives = 63/66 (95%)
 Frame = -3

Query: 635 RRLGIGFGQKKNDEQAKQYVHMLNSTLTATERTICCILENYQREDGVEIPQVLRPFMGGQ 456
           RRLGIG+GQKKNDEQ+KQ+VHMLNSTLTATERT+CCILEN+Q+EDGVE+P+ L+P+MGG 
Sbjct: 370 RRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKALQPYMGGI 429

Query: 455 EFISFK 438
           EF+ FK
Sbjct: 430 EFLPFK 435


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