BLASTX nr result

ID: Dioscorea21_contig00008863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008863
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays] g...   534   e-149
ref|XP_003566382.1| PREDICTED: seryl-tRNA synthetase-like [Brach...   533   e-149
ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [S...   532   e-149
gb|ACF84667.1| unknown [Zea mays] gi|195621762|gb|ACG32711.1| se...   531   e-148
ref|NP_001043340.1| Os01g0559100 [Oryza sativa Japonica Group] g...   530   e-148

>ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays]
            gi|194700466|gb|ACF84317.1| unknown [Zea mays]
            gi|414591450|tpg|DAA42021.1| TPA: seryl-tRNA synthetase
            isoform 1 [Zea mays] gi|414591451|tpg|DAA42022.1| TPA:
            seryl-tRNA synthetase isoform 2 [Zea mays]
            gi|414591452|tpg|DAA42023.1| TPA: seryl-tRNA synthetase
            isoform 3 [Zea mays]
          Length = 458

 Score =  534 bits (1376), Expect = e-149
 Identities = 249/294 (84%), Positives = 278/294 (94%)
 Frame = -1

Query: 1322 LKNHVDLVKLLDIADLEKGADVAGGRGFYLKGEGVLLNMALINFGLAFLRERKYVPMQTP 1143
            LKNHVDL ++LDI  LEKGADVAGGRGFYLK EGVLLN+ALINFGLAFLR+R + PMQTP
Sbjct: 142  LKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLNLALINFGLAFLRKRGFKPMQTP 201

Query: 1142 FFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIYPQDLPIRYA 963
            FFMRK+ M KCAQLAQFDEELYKVTG+G+DKYLIAT+EQPLCAYHL DRIYP +LPI+YA
Sbjct: 202  FFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATSEQPLCAYHLGDRIYPAELPIKYA 261

Query: 962  GYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEMLKNSEDFYKEL 783
            GYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFCITSPNDNDSWEMHEEMLKNSED+YKE+
Sbjct: 262  GYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSPNDNDSWEMHEEMLKNSEDYYKEI 321

Query: 782  NLPYQVVTIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRRLGIGCGQKKN 603
             LPYQVV+IVSGALNDAAAKKYDLEAWFPASKT+RELVSCSNCTD+QSRRLGIG GQKKN
Sbjct: 322  GLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKN 381

Query: 602  DEQAKQYVHILNSTLTATERTICCILENYQREDGIEIPRVLRPFMGGQEFISFK 441
            DEQ+KQ+VH+LNSTLTATERT+CCILEN+Q+EDG+E+P+ L+P+MGG EF+ FK
Sbjct: 382  DEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKALQPYMGGIEFLPFK 435


>ref|XP_003566382.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 456

 Score =  533 bits (1373), Expect = e-149
 Identities = 248/294 (84%), Positives = 276/294 (93%)
 Frame = -1

Query: 1322 LKNHVDLVKLLDIADLEKGADVAGGRGFYLKGEGVLLNMALINFGLAFLRERKYVPMQTP 1143
            LKNHVDL  +LDI  LEKGADVAGGRG++LKG GVLLNMALINFGLAFL  R Y PMQTP
Sbjct: 140  LKNHVDLCLMLDIVALEKGADVAGGRGYFLKGNGVLLNMALINFGLAFLGIRGYTPMQTP 199

Query: 1142 FFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIYPQDLPIRYA 963
            FFMRK+ MG+CAQLAQFDEELYKVTG+G++KYLIAT+EQPLCAYHL DRIYP DLPIRYA
Sbjct: 200  FFMRKETMGRCAQLAQFDEELYKVTGDGEEKYLIATSEQPLCAYHLGDRIYPADLPIRYA 259

Query: 962  GYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEMLKNSEDFYKEL 783
            GYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFC+TSPNDN+SWE+HEEM+KNSEDFYKE+
Sbjct: 260  GYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNNSWELHEEMIKNSEDFYKEI 319

Query: 782  NLPYQVVTIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRRLGIGCGQKKN 603
             LPYQ+V+IVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQ+RRLGIG GQKKN
Sbjct: 320  GLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQARRLGIGFGQKKN 379

Query: 602  DEQAKQYVHILNSTLTATERTICCILENYQREDGIEIPRVLRPFMGGQEFISFK 441
            DEQ+KQ+VH+LNSTLTATERT+CCILENYQ+EDG+E+P+ LRPFMGG +F+ FK
Sbjct: 380  DEQSKQFVHMLNSTLTATERTLCCILENYQKEDGVEVPKALRPFMGGIDFLPFK 433


>ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor]
            gi|241922186|gb|EER95330.1| hypothetical protein
            SORBIDRAFT_01g043930 [Sorghum bicolor]
          Length = 458

 Score =  532 bits (1370), Expect = e-149
 Identities = 248/294 (84%), Positives = 276/294 (93%)
 Frame = -1

Query: 1322 LKNHVDLVKLLDIADLEKGADVAGGRGFYLKGEGVLLNMALINFGLAFLRERKYVPMQTP 1143
            LKNHVDL ++LDI  LEKGADVAGGRGFYLKG+GV LN ALINFGLAFLR+R + PMQTP
Sbjct: 142  LKNHVDLCRMLDIVALEKGADVAGGRGFYLKGDGVFLNQALINFGLAFLRKRGFEPMQTP 201

Query: 1142 FFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIYPQDLPIRYA 963
            FFMRK+ M KCAQLAQFDEELYKVTG+G+DKYLIAT+EQPLCAYHL DRIYP +LPI+YA
Sbjct: 202  FFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATSEQPLCAYHLGDRIYPAELPIKYA 261

Query: 962  GYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEMLKNSEDFYKEL 783
            GYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFCITSPN NDSWEMHEEMLKNSEDFYKE+
Sbjct: 262  GYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSPNGNDSWEMHEEMLKNSEDFYKEI 321

Query: 782  NLPYQVVTIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRRLGIGCGQKKN 603
             LPYQVV+IVSGALNDAAAKKYDLEAWFPASKT+RELVSCSNCTD+QSRRLGIG GQKKN
Sbjct: 322  GLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKN 381

Query: 602  DEQAKQYVHILNSTLTATERTICCILENYQREDGIEIPRVLRPFMGGQEFISFK 441
            DEQ+KQ+VH+LNSTLTATERT+CCILEN+Q+EDG+E+P+ L+P+MGG EF+ FK
Sbjct: 382  DEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKALQPYMGGIEFLPFK 435


>gb|ACF84667.1| unknown [Zea mays] gi|195621762|gb|ACG32711.1| seryl-tRNA synthetase
            [Zea mays]
          Length = 458

 Score =  531 bits (1368), Expect = e-148
 Identities = 248/294 (84%), Positives = 277/294 (94%)
 Frame = -1

Query: 1322 LKNHVDLVKLLDIADLEKGADVAGGRGFYLKGEGVLLNMALINFGLAFLRERKYVPMQTP 1143
            LKNHVDL ++LDI  LEKGADVAGGRGFYLK EGVLLN+ALINFGLAFLR+R + PMQTP
Sbjct: 142  LKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLNLALINFGLAFLRKRGFKPMQTP 201

Query: 1142 FFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIYPQDLPIRYA 963
            FFMRK+ M KCAQLAQFDEELYKVTG+G+DKYLIAT+EQPLCAYHL DRIYP +LPI+YA
Sbjct: 202  FFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATSEQPLCAYHLGDRIYPAELPIKYA 261

Query: 962  GYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEMLKNSEDFYKEL 783
            GYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFCITSPN NDSWE+HEEMLKNSEDFYKE+
Sbjct: 262  GYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSPNGNDSWEIHEEMLKNSEDFYKEI 321

Query: 782  NLPYQVVTIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRRLGIGCGQKKN 603
             LPYQVV+IVSGALNDAAAKKYDLEAWFPASKT+RELVSCSNCTD+QSRRLGIG GQKKN
Sbjct: 322  GLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKN 381

Query: 602  DEQAKQYVHILNSTLTATERTICCILENYQREDGIEIPRVLRPFMGGQEFISFK 441
            DEQ+KQ+VH+LNSTLTATERT+CCILEN+Q+EDG+E+P+ L+P+MGG EF+ FK
Sbjct: 382  DEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKALQPYMGGIEFLPFK 435


>ref|NP_001043340.1| Os01g0559100 [Oryza sativa Japonica Group]
            gi|57899337|dbj|BAD87948.1| putative seryl-tRNA
            synthetase [Oryza sativa Japonica Group]
            gi|57900427|dbj|BAD87663.1| putative seryl-tRNA
            synthetase [Oryza sativa Japonica Group]
            gi|113532871|dbj|BAF05254.1| Os01g0559100 [Oryza sativa
            Japonica Group]
          Length = 425

 Score =  530 bits (1364), Expect = e-148
 Identities = 244/294 (82%), Positives = 279/294 (94%)
 Frame = -1

Query: 1322 LKNHVDLVKLLDIADLEKGADVAGGRGFYLKGEGVLLNMALINFGLAFLRERKYVPMQTP 1143
            LKNHVDL K+LDI  LEKGADVAGGRG+YLK EGVLLN+ALINFGLAFLR+R + PMQTP
Sbjct: 120  LKNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLNLALINFGLAFLRKRGFKPMQTP 179

Query: 1142 FFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIYPQDLPIRYA 963
            FFMRK+ MGKCAQLAQFDEELYK+TG+G++KYLIAT+EQPLCAYHL DRIYP +LPIRYA
Sbjct: 180  FFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATSEQPLCAYHLGDRIYPAELPIRYA 239

Query: 962  GYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEMHEEMLKNSEDFYKEL 783
            GYSTCFRKEAGSHGRDT GIFRVHQFEK+EQFC+TSPNDN+SWEMHEEM+KNSEDFYKE+
Sbjct: 240  GYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEI 299

Query: 782  NLPYQVVTIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRRLGIGCGQKKN 603
             LPYQ+V+IVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTD+Q+RRLGIG GQKKN
Sbjct: 300  GLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKN 359

Query: 602  DEQAKQYVHILNSTLTATERTICCILENYQREDGIEIPRVLRPFMGGQEFISFK 441
            DEQ+KQ+VH+LNSTLTATERT+CCILEN+Q+E+G+E+P+ L+P+MGG +F+ FK
Sbjct: 360  DEQSKQFVHMLNSTLTATERTLCCILENFQKENGVEVPKALQPYMGGIDFLPFK 413


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