BLASTX nr result

ID: Dioscorea21_contig00008833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008833
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631692.1| PREDICTED: malate dehydrogenase, glyoxysomal...   117   1e-24
gb|ABW79813.1| malate dehydrogenase [Perilla frutescens]              116   2e-24
ref|XP_003576179.1| PREDICTED: malate dehydrogenase, glyoxysomal...   116   2e-24
gb|AFX00023.1| malate dehydrogenase [Echinochloa crus-galli]          114   8e-24
pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysom...   114   1e-23

>ref|XP_003631692.1| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera]
           gi|147774268|emb|CAN65552.1| hypothetical protein
           VITISV_033330 [Vitis vinifera]
           gi|297736349|emb|CBI25072.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 39  CLRGLHGDAGIIECSFVASQVTELPFFAAKVRLGRGGAEEIFPLGPLNEFERVGLEKAKK 218
           CLRGL GDAG++EC+FVASQVTELPFFA KVRLGR GAEEI+ LGPLNE+ERVGLEKAKK
Sbjct: 282 CLRGLRGDAGVVECTFVASQVTELPFFATKVRLGRSGAEEIYQLGPLNEYERVGLEKAKK 341

Query: 219 ELAG 230
           ELAG
Sbjct: 342 ELAG 345


>gb|ABW79813.1| malate dehydrogenase [Perilla frutescens]
          Length = 354

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/63 (87%), Positives = 60/63 (95%)
 Frame = +3

Query: 39  CLRGLHGDAGIIECSFVASQVTELPFFAAKVRLGRGGAEEIFPLGPLNEFERVGLEKAKK 218
           CLRGL GDAGI+EC+FVASQVT+LPFFA KVRLGRGGAEE+F LGPLNE+ERVGLEKAKK
Sbjct: 280 CLRGLKGDAGIVECAFVASQVTDLPFFATKVRLGRGGAEEVFQLGPLNEYERVGLEKAKK 339

Query: 219 ELA 227
           ELA
Sbjct: 340 ELA 342


>ref|XP_003576179.1| PREDICTED: malate dehydrogenase, glyoxysomal-like [Brachypodium
           distachyon]
          Length = 359

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/63 (87%), Positives = 59/63 (93%)
 Frame = +3

Query: 39  CLRGLHGDAGIIECSFVASQVTELPFFAAKVRLGRGGAEEIFPLGPLNEFERVGLEKAKK 218
           CLRGLHGDAGI+ECS+VASQVTELPFFA+KVRLGR G EEI PLGPLNEFER GLEKAKK
Sbjct: 285 CLRGLHGDAGIVECSYVASQVTELPFFASKVRLGRCGVEEILPLGPLNEFERAGLEKAKK 344

Query: 219 ELA 227
           EL+
Sbjct: 345 ELS 347


>gb|AFX00023.1| malate dehydrogenase [Echinochloa crus-galli]
          Length = 361

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/63 (85%), Positives = 58/63 (92%)
 Frame = +3

Query: 39  CLRGLHGDAGIIECSFVASQVTELPFFAAKVRLGRGGAEEIFPLGPLNEFERVGLEKAKK 218
           CLRGL GDAGI+ECS+VASQVTELPFFA+KVRLGR G EEI PLGPLNEFER GLEKAKK
Sbjct: 287 CLRGLRGDAGIVECSYVASQVTELPFFASKVRLGRSGVEEILPLGPLNEFERTGLEKAKK 346

Query: 219 ELA 227
           EL+
Sbjct: 347 ELS 349


>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate
           Dehydrogenase Have Different Activities And Stabilities
           But Similar Crystal Structures gi|60593476|pdb|1SEV|B
           Chain B, Mature And Translocatable Forms Of Glyoxysomal
           Malate Dehydrogenase Have Different Activities And
           Stabilities But Similar Crystal Structures
          Length = 362

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/64 (81%), Positives = 60/64 (93%)
 Frame = +3

Query: 39  CLRGLHGDAGIIECSFVASQVTELPFFAAKVRLGRGGAEEIFPLGPLNEFERVGLEKAKK 218
           CLRGL GDAG+IEC+FV+SQVTELPFFA+KVRLGR G EE++ LGPLNE+ER+GLEKAKK
Sbjct: 282 CLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKK 341

Query: 219 ELAG 230
           ELAG
Sbjct: 342 ELAG 345


Top