BLASTX nr result

ID: Dioscorea21_contig00008810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008810
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]        118   4e-25
ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [S...   115   3e-24
ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g...   110   1e-22
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi...   110   1e-22
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22

>gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
          Length = 798

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/112 (59%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFE-DLFVANALVTMYSDCGSLSDAELVFR 179
           F  SV+LRACA+ GSL  G++LH  V K+GY   DLFVAN LVTMYS C SL  AE VF 
Sbjct: 116 FVFSVALRACAAVGSLRLGRQLHGAVAKLGYVGVDLFVANGLVTMYSSCQSLPCAEKVFG 175

Query: 180 EIKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALTLA 335
            I  PDLVSW+SMLSAY +NGRD + L L  EM+  GV  DAF L  AL  A
Sbjct: 176 SIASPDLVSWTSMLSAYTENGRDAEALVLFMEMARGGVACDAFTLSVALRAA 227



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/109 (34%), Positives = 58/109 (53%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F V+ SL++CAS   L  G+ LH  +LK     D FV ++L+ MY+ CG+L ++ L+F  
Sbjct: 396 FIVASSLKSCASGLDLLAGRMLHACILKSDMNPDSFVTSSLLDMYAKCGALEESNLLFSR 455

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALT 329
            K P    WS+ +S    NG+  + ++L   M    VQ + F     LT
Sbjct: 456 TKNPGTAEWSAAISGNCLNGQYGRAVQLFRRMQSEHVQPNEFTYTAILT 504



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = +3

Query: 3   FAVSVSLRACASTG--SLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVF 176
           F +SV+LRA +S G   +  G +LHC ++KMG     F+ N L+  Y   G L     VF
Sbjct: 218 FTLSVALRAASSLGHVGVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVF 277

Query: 177 REIKQPDLVSWSSMLSAYMKN 239
            E+   DLVSW++++  Y +N
Sbjct: 278 DEMNGKDLVSWNTVIQCYAEN 298


>ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
           gi|241933759|gb|EES06904.1| hypothetical protein
           SORBIDRAFT_04g021580 [Sorghum bicolor]
          Length = 798

 Score =  115 bits (289), Expect = 3e-24
 Identities = 65/112 (58%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYF-EDLFVANALVTMYSDCGSLSDAELVFR 179
           F  SV+LRACA+ GSL  G++LH  V K+GY   DLFVAN LVTMYS C SL  AE VF 
Sbjct: 117 FVFSVALRACAAVGSLGLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCAEKVFG 176

Query: 180 EIKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALTLA 335
            I  PDLVSW+SMLSAY +NG D + L L  EM+  G+  DAF L  AL  A
Sbjct: 177 SITSPDLVSWTSMLSAYTENGCDAEALMLFMEMARDGIACDAFTLSVALRAA 228



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/109 (34%), Positives = 57/109 (52%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F V+ SL++CAS   L  G+ LH  +LK     D FV ++LV MY+ CG+L ++ ++F  
Sbjct: 395 FIVASSLKSCASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCGALEESNMLFSR 454

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALT 329
            K P    WS+ +S    NG+  + + L   M    VQ + F     LT
Sbjct: 455 TKNPGTAVWSAAISGNCLNGQYGRAVHLFRRMQSEHVQPNEFTYTAILT 503



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F +SV+LRA +S G +  G +LHC ++KMG     F+ N L+  Y   G L     VF E
Sbjct: 219 FTLSVALRAASSLGHVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVFDE 278

Query: 183 IKQPDLVSWSSMLSAYMKN 239
           +   DLVSW++++  Y +N
Sbjct: 279 MNGKDLVSWNTIIQCYAEN 297


>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
           gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
           sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
           hypothetical protein OsJ_06992 [Oryza sativa Japonica
           Group] gi|215696993|dbj|BAG90987.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score =  110 bits (275), Expect = 1e-22
 Identities = 63/112 (56%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYF-EDLFVANALVTMYSDCGSLSDAELVFR 179
           F  SV+LRACA+ GSL  G+++H    KMGY   DLFVAN LVTMY+ C SL  AE VF 
Sbjct: 105 FVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFS 164

Query: 180 EIKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALTLA 335
            I  PD VSW+SMLSAY +NG D Q L L  EM   GV  DA+ L  AL  A
Sbjct: 165 GIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAA 216



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/109 (38%), Positives = 62/109 (56%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F V+ SL++CAS   L  G+ LH  VLK     D FV ++LV MY+ CGSL +A ++F  
Sbjct: 383 FIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSR 442

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALT 329
            K P  V+WS+++S    NG+ ++ + L   M +  VQ + F     LT
Sbjct: 443 TKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLT 491



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/104 (31%), Positives = 55/104 (52%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           + +SV+LRA +S G +  G +LHC ++K G+    F+ N L+  Y  C  L   + VF E
Sbjct: 207 YTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDE 266

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVL 314
           +   DLVSW+ ++  Y  N  D++ L    ++     + D + L
Sbjct: 267 MNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTL 310


>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score =  110 bits (275), Expect = 1e-22
 Identities = 63/112 (56%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYF-EDLFVANALVTMYSDCGSLSDAELVFR 179
           F  SV+LRACA+ GSL  G+++H    KMGY   DLFVAN LVTMY+ C SL  AE VF 
Sbjct: 105 FVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFS 164

Query: 180 EIKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALTLA 335
            I  PD VSW+SMLSAY +NG D Q L L  EM   GV  DA+ L  AL  A
Sbjct: 165 GIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAA 216



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/109 (38%), Positives = 62/109 (56%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F V+ SL++CAS   L  G+ LH  VLK     D FV ++LV MY+ CGSL +A ++F  
Sbjct: 383 FIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSR 442

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALT 329
            K P  V+WS+++S    NG+ ++ + L   M +  VQ + F     LT
Sbjct: 443 TKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLT 491



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/104 (31%), Positives = 55/104 (52%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           + +SV+LRA +S G +  G +LHC ++K G+    F+ N L+  Y  C  L   + VF E
Sbjct: 207 YTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDE 266

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVL 314
           +   DLVSW+ ++  Y  N  D++ L    ++     + D + L
Sbjct: 267 MNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTL 310


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/112 (53%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYF-EDLFVANALVTMYSDCGSLSDAELVFR 179
           F  SV+LRACA+ GS   G++LHC   KMGY   DLFVAN L+TMY+ C SL  AE VF 
Sbjct: 107 FVFSVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGCAEKVFN 166

Query: 180 EIKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALTLA 335
            I  PDLVSW+SMLS Y +NG   + + L  EM   G++ DAF L  AL  A
Sbjct: 167 GIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAA 218



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/109 (36%), Positives = 60/109 (55%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F V+ SLR+CAS   L  G+ LH  +LK+    D FV ++LV MY+ CG L ++ L+F  
Sbjct: 385 FIVASSLRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEESHLLFST 444

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVLR*ALT 329
            K P    WS+++S    NG+ ++ L L   M +  V+ + F     LT
Sbjct: 445 TKYPGTAEWSAVISGNCLNGQFERALHLFRRMQLDHVRPNEFTYTSVLT 493



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/104 (33%), Positives = 55/104 (52%)
 Frame = +3

Query: 3   FAVSVSLRACASTGSLHCGQELHCLVLKMGYFEDLFVANALVTMYSDCGSLSDAELVFRE 182
           F +SV+LRA +S  +L  G +LHC ++K+G+    F+ N L+  Y     L   + VF +
Sbjct: 209 FTLSVALRAASSLANLSLGHQLHCCIIKLGFSNSGFLENCLIEFYGKSSELHLMQKVFDD 268

Query: 183 IKQPDLVSWSSMLSAYMKNGRDKQVLRLIGEMSVTGVQFDAFVL 314
           +   DLVS ++++  Y  N  D+Q L     M   G + D F L
Sbjct: 269 MDDKDLVSSNTVIQCYADNMCDEQALSHFRAMMFEGSECDEFTL 312


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